Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.8e-124 448.0 247 100.0
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 4.0e-94 348.6 249 79.5
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 6.1e-79 298.1 180 85.6
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 1.3e-68 263.8 251 68.1
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 4.9e-68 261.9 247 61.5
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.4e-67 260.4 251 61.0
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.2e-67 259.2 246 63.4
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 4.1e-67 258.8 154 83.8
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 7.0e-67 258.1 250 60.0
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 9.2e-67 257.7 247 63.2
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 9.2e-67 257.7 175 75.4
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.2e-66 257.3 243 61.3
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.0e-66 256.5 171 76.0
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 2.7e-66 256.1 154 82.5
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 3.5e-66 255.8 267 57.7
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.6e-66 255.4 248 60.1
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.3e-65 253.8 252 59.1
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.7e-65 253.4 249 60.6
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.3e-65 253.1 276 56.9
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 2.3e-65 253.1 247 59.1
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 3.0e-65 252.7 265 56.6
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 5.0e-65 251.9 243 60.9
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 6.6e-65 251.5 261 58.6
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 8.6e-65 251.1 247 58.3
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.5e-64 250.4 246 58.5
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.9e-64 250.0 255 59.6
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.5e-64 249.6 265 56.2
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 3.3e-64 249.2 252 57.1
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 7.3e-64 248.1 257 58.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 9.5e-64 247.7 252 57.1
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 9.5e-64 247.7 252 58.7
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.6e-63 246.9 164 76.8
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 2.1e-63 246.5 250 58.8
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 2.8e-63 246.1 207 65.2
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 4.7e-63 245.4 197 66.5
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 6.2e-63 245.0 247 57.9
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.1e-62 244.2 246 58.5
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.4e-62 243.8 167 74.3
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.4e-62 243.8 247 58.7
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.4e-62 243.8 247 59.9
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.8e-62 243.4 157 79.0
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 3.1e-62 242.7 251 59.0
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 3.1e-62 242.7 163 74.8
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.1e-62 242.7 247 57.1
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 4.0e-62 242.3 205 64.4
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 8.9e-62 241.1 263 56.3
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 1.2e-61 240.7 246 58.9
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.2e-61 240.7 247 59.5
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.2e-61 240.7 247 59.5
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 2.0e-61 240.0 155 78.7
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 2.6e-61 239.6 276 54.3
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.6e-61 239.6 248 58.9
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 4.4e-61 238.8 251 56.2
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 7.5e-61 238.0 167 73.7
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 7.5e-61 238.0 206 62.6
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 9.8e-61 237.7 251 58.6
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 1.3e-60 237.3 247 56.7
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 4.9e-60 235.3 160 75.6
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 6.4e-60 235.0 176 68.2
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 6.4e-60 235.0 152 77.0
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 8.3e-60 234.6 205 62.4
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 8.3e-60 234.6 158 75.9
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.1e-59 234.2 167 72.5
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.4e-59 233.8 246 56.9
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 5.4e-59 231.9 152 75.7
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.2e-58 230.7 283 51.2
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.2e-58 230.7 242 55.0
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.6e-58 230.3 250 60.8
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.1e-58 229.9 247 55.5
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.5e-58 229.2 319 47.0
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.3e-57 227.3 153 75.2
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.7e-57 226.9 248 55.6
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 3.0e-57 226.1 249 55.4
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 8.6e-57 224.6 154 72.7
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.1e-56 224.2 250 54.8
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 3.3e-56 222.6 249 56.2
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 4.3e-56 222.2 243 59.7
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 5.6e-56 221.9 153 72.5
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.2e-55 220.7 157 68.2
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.6e-55 220.3 175 63.4
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.1e-54 217.6 247 53.8
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.1e-54 216.1 278 50.4
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 4.0e-54 215.7 169 67.5
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.3e-52 210.7 213 57.3
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 3.7e-52 209.1 155 69.0
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 4.9e-52 208.8 151 67.5
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 6.4e-52 208.4 324 43.5
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.4e-51 207.2 284 46.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 1.9e-51 206.8 277 48.4
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 2.4e-51 206.5 378 41.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 4.1e-51 205.7 190 57.9
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 3.0e-49 199.5 191 58.1
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 8.6e-49 198.0 245 48.2
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 9.6e-48 194.5 247 49.4
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 5.8e-45 185.3 250 50.0
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 6.0e-42 175.3 107 80.4
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 6.6e-41 171.8 283 42.8
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 4.8e-39 165.6 218 50.9
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 9.0e-38 161.4 116 72.4
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 9.0e-38 161.4 194 54.1
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.9e-35 153.7 110 73.6
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 1.8e-30 137.1 146 54.1
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.1e-30 136.3 109 67.9
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 6.9e-30 135.2 167 47.9
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.2e-29 134.4 203 41.4
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.6e-26 124.0 86 75.6
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 7.9e-26 121.7 90 74.4
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 8.1e-23 111.7 242 38.0
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.5e-19 99.0 96 59.4
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 9.6e-16 88.2 363 29.5
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 6.9e-14 82.0 67 64.2
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 3.5e-10 69.7 76 51.3
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-08 64.7 56 58.9
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.2e-07 60.5 35 71.4
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 4.1e-06 56.2 115 33.0
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 4.1e-06 56.2 37 67.6
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 5.3e-06 55.8 34 76.5


User provided reference genes

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