Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 2.0e-56 222.2 117 100.0
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 5.2e-28 127.9 156 54.5
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 1.1e-17 93.6 139 46.0
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.1e-17 93.6 163 47.2
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 3.5e-16 88.6 133 47.4
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 6.0e-16 87.8 157 45.9
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 1.3e-15 86.7 116 52.6
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 2.3e-15 85.9 140 44.3
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 2.3e-15 85.9 139 44.6
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 3.0e-15 85.5 140 43.6
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 3.9e-15 85.1 138 44.2
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 6.6e-15 84.3 128 45.3
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 6.6e-15 84.3 123 49.6
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 6.6e-15 84.3 135 43.0
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 8.6e-15 84.0 145 44.1
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 1.1e-14 83.6 129 44.2
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 1.1e-14 83.6 117 49.6
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 1.5e-14 83.2 132 47.0
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.9e-14 82.8 107 48.6
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.5e-14 82.4 121 48.8
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 2.5e-14 82.4 121 48.8
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.5e-14 82.4 124 46.8
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 4.3e-14 81.6 139 42.4
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 4.3e-14 81.6 139 43.9
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 4.3e-14 81.6 139 43.9
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 4.3e-14 81.6 135 43.7
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 7.3e-14 80.9 133 45.1
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 7.3e-14 80.9 124 46.0
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 7.3e-14 80.9 135 43.7
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 7.3e-14 80.9 118 49.2
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 9.5e-14 80.5 136 44.1
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 9.5e-14 80.5 139 44.6
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.6e-13 79.7 130 43.8
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 2.1e-13 79.3 140 42.9
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 2.1e-13 79.3 134 46.3
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 2.1e-13 79.3 131 43.5
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 2.8e-13 79.0 120 45.8
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 2.8e-13 79.0 134 45.5
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 2.8e-13 79.0 133 42.1
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 3.6e-13 78.6 133 45.9
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.6e-13 78.6 144 41.0
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 4.7e-13 78.2 125 44.0
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 8.1e-13 77.4 120 45.0
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 8.1e-13 77.4 117 47.9
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.4e-12 76.6 144 40.3
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 1.4e-12 76.6 137 43.8
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.8e-12 76.3 124 45.2
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.8e-12 76.3 120 45.0
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 2.3e-12 75.9 120 44.2
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 3.1e-12 75.5 136 38.2
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 3.1e-12 75.5 137 39.4
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 4.0e-12 75.1 128 45.3
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 5.2e-12 74.7 150 38.7
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 5.2e-12 74.7 137 43.1
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 6.8e-12 74.3 135 41.5
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 6.8e-12 74.3 157 38.9
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 6.8e-12 74.3 119 44.5
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 8.9e-12 73.9 148 39.2
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 8.9e-12 73.9 118 44.1
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 2.0e-11 72.8 113 41.6
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 2.0e-11 72.8 130 43.8
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 2.0e-11 72.8 126 46.0
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 3.4e-11 72.0 137 40.1
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 4.4e-11 71.6 112 45.5
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 4.4e-11 71.6 130 43.8
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 5.8e-11 71.2 146 38.4
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 7.5e-11 70.9 129 41.9
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 7.5e-11 70.9 140 39.3
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 7.5e-11 70.9 166 41.0
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 9.9e-11 70.5 109 45.0
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 9.9e-11 70.5 137 39.4
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 9.9e-11 70.5 137 39.4
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.3e-10 70.1 124 43.5
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.7e-10 69.7 154 39.0
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 2.2e-10 69.3 143 39.9
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 2.2e-10 69.3 149 38.9
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 3.7e-10 68.6 139 41.7
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 3.7e-10 68.6 123 42.3
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 3.7e-10 68.6 123 42.3
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 3.7e-10 68.6 135 40.7
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.9e-10 68.2 145 36.6
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 4.9e-10 68.2 159 39.6
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 6.4e-10 67.8 125 43.2
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 4.1e-09 65.1 155 36.8
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 7.1e-09 64.3 214 32.2
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 7.1e-09 64.3 146 37.0
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 2.1e-08 62.8 118 43.2
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.7e-08 62.4 146 36.3
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 4.6e-08 61.6 126 39.7
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 4.6e-08 61.6 126 39.7
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 6.0e-08 61.2 146 36.3
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 6.0e-08 61.2 124 39.5
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 7.8e-08 60.8 137 38.0
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 3.0e-07 58.9 136 36.8
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 1.5e-06 56.6 141 37.6
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.5e-06 56.6 89 44.9
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 7.3e-06 54.3 65 52.3
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 7.3e-06 54.3 95 41.1


User provided reference genes

Program Settings