Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 2.6e-110 402.1 211 100.0
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 4.8e-40 168.7 191 51.8
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 1.4e-39 167.2 173 57.2
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 1.4e-34 150.6 201 49.3
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 3.8e-21 105.9 162 40.7
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 1.5e-20 104.0 113 49.6
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 5.5e-20 102.1 165 41.8
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 5.5e-20 102.1 178 39.9
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 9.4e-20 101.3 164 40.2
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 3.6e-19 99.4 162 38.9
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 6.1e-19 98.6 124 41.9
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 8.0e-19 98.2 119 48.7
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 3.0e-18 96.3 127 44.9
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 5.2e-18 95.5 143 41.3
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 8.8e-18 94.7 140 42.9
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 9.7e-17 91.3 173 38.2
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 1.3e-16 90.9 201 35.8
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 2.8e-16 89.7 179 35.8
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 2.8e-16 89.7 137 41.6
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 2.8e-16 89.7 100 45.0
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 3.7e-16 89.4 151 39.7
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 3.7e-16 89.4 169 37.3
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 3.7e-16 89.4 157 38.2
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 3.7e-16 89.4 150 42.0
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 4.8e-16 89.0 123 43.1
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 6.3e-16 88.6 169 37.3
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 6.3e-16 88.6 184 32.6
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 1.4e-15 87.4 153 36.6
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 2.4e-15 86.7 168 38.1
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 3.1e-15 86.3 111 40.5
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 4.1e-15 85.9 173 34.7
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 5.3e-15 85.5 106 41.5
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 5.3e-15 85.5 161 37.3
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 5.3e-15 85.5 153 37.3
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 7.0e-15 85.1 150 38.7
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 7.0e-15 85.1 157 36.9
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 7.0e-15 85.1 150 35.3
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 2.0e-14 83.6 134 38.1
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 2.0e-14 83.6 114 42.1
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 2.0e-14 83.6 114 42.1
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 2.0e-14 83.6 114 42.1
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 2.6e-14 83.2 175 32.6
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 1.3e-13 80.9 164 34.1
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 3.8e-13 79.3 120 38.3
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 5.0e-13 79.0 95 41.1
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 8.5e-13 78.2 101 39.6
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 1.9e-12 77.0 170 32.9
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 2.5e-12 76.6 151 37.1
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 2.5e-12 76.6 107 38.3
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 5.5e-12 75.5 137 35.8
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 5.5e-12 75.5 131 32.1
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 2.1e-11 73.6 140 32.1
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 3.6e-11 72.8 211 32.7
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 8.0e-11 71.6 71 52.1
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 1.5e-09 67.4 133 36.8
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 3.4e-09 66.2 150 33.3
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 5.7e-09 65.5 161 31.7
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 3.7e-08 62.8 134 30.6
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 4.8e-08 62.4 168 29.2
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 4.8e-08 62.4 131 35.1
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 8.3e-08 61.6 61 50.8
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 8.3e-08 61.6 119 31.1
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 4.1e-07 59.3 128 29.7
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 1.2e-06 57.8 141 31.2
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 4.5e-06 55.8 95 32.6


User provided reference genes

Program Settings