Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 1.1e-159 566.6 291 100.0
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 2.2e-43 180.3 191 51.8
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 4.2e-34 149.4 139 53.2
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 2.8e-30 136.7 101 66.3
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 5.3e-21 105.9 106 53.8
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 2.0e-20 104.0 140 43.6
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 4.5e-20 102.8 121 45.5
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 7.6e-20 102.1 149 39.6
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 9.9e-20 101.7 127 47.2
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 9.9e-20 101.7 127 47.2
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 9.9e-20 101.7 127 47.2
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 1.7e-19 100.9 104 45.2
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 3.8e-19 99.8 97 51.5
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 4.9e-19 99.4 126 44.4
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 4.9e-19 99.4 129 48.1
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 6.4e-19 99.0 100 50.0
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 6.4e-19 99.0 123 43.9
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 2.4e-18 97.1 134 45.5
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 2.4e-18 97.1 125 42.4
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 5.4e-18 95.9 166 36.7
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 2.1e-17 94.0 135 39.3
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 2.7e-17 93.6 115 42.6
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 2.7e-17 93.6 126 43.7
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 3.5e-17 93.2 109 46.8
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 4.6e-17 92.8 130 43.1
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 6.0e-17 92.4 138 39.9
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 1.0e-16 91.7 126 38.9
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 1.3e-16 91.3 105 47.6
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 3.9e-16 89.7 150 36.7
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 3.9e-16 89.7 100 47.0
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 5.1e-16 89.4 138 39.1
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 5.1e-16 89.4 116 43.1
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 1.5e-15 87.8 113 46.0
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 1.5e-15 87.8 148 42.6
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 1.5e-15 87.8 156 35.3
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 1.9e-15 87.4 109 46.8
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 1.9e-15 87.4 108 46.3
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 2.5e-15 87.0 126 38.9
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 5.6e-15 85.9 105 43.8
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 7.4e-15 85.5 114 45.6
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 1.3e-14 84.7 103 46.6
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 1.3e-14 84.7 117 39.3
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 1.3e-14 84.7 215 32.6
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 6.2e-14 82.4 113 40.7
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 9.0e-13 78.6 86 46.5
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 1.5e-12 77.8 194 31.4
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 2.0e-12 77.4 143 35.0
HanXRQChr01g0005601 Helianthus annuus HOM05D017262 ORTHO05D009814 2.0e-12 77.4 136 36.0
HanXRQChr01g0017261 Helianthus annuus HOM05D017262 ORTHO05D009814 2.0e-12 77.4 136 36.0
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 2.6e-12 77.0 153 31.4
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 2.6e-12 77.0 103 42.7
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 5.8e-12 75.9 143 35.0
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 5.8e-12 75.9 143 35.0
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 5.8e-12 75.9 143 35.7
HanXRQChr04g0114771 Helianthus annuus HOM05D017262 ORTHO05D009814 5.8e-12 75.9 136 36.0
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 1.0e-11 75.1 115 41.7
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 1.7e-11 74.3 112 38.4
HanXRQChr13g0394471 Helianthus annuus HOM05D017262 ORTHO05D009814 1.7e-11 74.3 152 34.9
Lsat_1_v5_gn_6_87320 Lactuca sativa HOM05D003598 ORTHO05D009814 1.4e-10 71.2 205 34.6
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 1.4e-10 71.2 90 41.1
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 7.1e-10 68.9 145 33.8
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 1.6e-09 67.8 113 33.6
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.6e-09 67.8 158 32.9
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 7.9e-09 65.5 94 37.2
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 1.3e-08 64.7 69 46.4
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 1.8e-08 64.3 140 32.1
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 8.7e-08 62.0 137 34.3
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 1.1e-07 61.6 48 56.2
HanXRQChr16g0530931 Helianthus annuus HOM05D017262 ORTHO05D009814 7.4e-07 58.9 119 33.6
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 2.1e-06 57.4 98 30.6
HPP92_005977 Vanilla planifolia HOM05D061362 ORTHO05D010154 6.2e-06 55.8 106 32.1


User provided reference genes

Program Settings