Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0377841 Helianthus annuus HOM05D003599 ORTHO05D004221 5.2e-102 374.4 192 100.0
HanXRQChr17g0548731 Helianthus annuus HOM05D003599 ORTHO05D004221 5.2e-102 374.4 192 100.0
HanXRQChr01g0017271 Helianthus annuus HOM05D003599 ORTHO05D004221 6.3e-63 244.6 131 93.1
ECA248G3304 Erigeron canadensis HOM05D003599 ORTHO05D004221 1.0e-60 237.3 131 90.1
Lsat_1_v5_gn_1_110320 Lactuca sativa HOM05D003599 ORTHO05D004221 6.1e-58 228.0 131 88.5
Dinv43470 Davidia involucrata HOM05D003599 ORTHO05D004221 2.8e-55 219.2 131 82.4
Lj7C568T3 Lonicera japonica HOM05D003599 ORTHO05D004221 1.1e-54 217.2 130 81.5
Dinv09382 Davidia involucrata HOM05D003599 ORTHO05D004221 4.5e-53 211.8 131 79.4
Gohir.D08G167000 Gossypium hirsutum HOM05D003599 ORTHO05D004221 4.5e-53 211.8 131 77.9
Gorai.004G174400 Gossypium raimondii HOM05D003599 ORTHO05D004221 4.5e-53 211.8 131 77.9
Peaxi162Scf00058g00215 Petunia axillaris HOM05D003599 ORTHO05D004221 7.7e-53 211.1 131 80.9
CSS0018905 Camellia sinensis var. sinensis HOM05D003599 ORTHO05D004221 1.3e-52 210.3 131 80.2
Gohir.A08G146100 Gossypium hirsutum HOM05D003599 ORTHO05D004221 1.3e-52 210.3 131 77.1
Nn7g36074 Nelumbo nucifera HOM05D003599 ORTHO05D004221 2.2e-52 209.5 130 80.0
TAR369G0496 Trochodendron aralioides HOM05D003599 ORTHO05D004221 2.9e-52 209.1 130 78.5
Cc02_g27450 Coffea canephora HOM05D003599 ORTHO05D004221 5.0e-52 208.4 131 79.4
Nitab4.5_0001542g0140 Nicotiana tabacum HOM05D003599 ORTHO05D004221 5.0e-52 208.4 127 81.1
Nitab4.5_0004883g0020 Nicotiana tabacum HOM05D003599 ORTHO05D004221 8.5e-52 207.6 125 82.4
QL04p003920 Quercus lobata HOM05D003599 ORTHO05D004221 8.5e-52 207.6 131 77.1
QL04p004288 Quercus lobata HOM05D003599 ORTHO05D004221 8.5e-52 207.6 131 77.1
Migut.B01342 Erythranthe guttata HOM05D003599 ORTHO05D004221 1.1e-51 207.2 130 80.8
MD02G1316400 Malus domestica HOM05D003599 ORTHO05D004221 1.1e-51 207.2 131 77.1
MD07G1005500 Malus domestica HOM05D003599 ORTHO05D004221 1.4e-51 206.8 131 77.1
Oeu034893.1 Olea europaea HOM05D003599 ORTHO05D004221 1.4e-51 206.8 130 77.7
Migut.N01485 Erythranthe guttata HOM05D003599 ORTHO05D004221 2.5e-51 206.1 129 79.8
Ciclev10030514m.g Citrus clementina HOM05D003599 ORTHO05D004221 3.2e-51 205.7 131 74.8
Haze_03250 Corylus avellana HOM05D003599 ORTHO05D004221 3.2e-51 205.7 131 76.3
SalBow4G2031 Salvia bowleyana HOM05D003599 ORTHO05D004221 3.2e-51 205.7 128 79.7
MSTRG.17057 Avicennia marina HOM05D003599 ORTHO05D004221 4.2e-51 205.3 130 80.0
Glyma.15G271800 Glycine max HOM05D003599 ORTHO05D004221 4.2e-51 205.3 134 76.1
Duzib268G0099 Durio zibethinus HOM05D003599 ORTHO05D004221 5.5e-51 204.9 131 76.3
TWI53G1897 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 5.5e-51 204.9 130 77.7
Rhsim07G0053800 Rhododendron simsii HOM05D003599 ORTHO05D004221 7.2e-51 204.5 132 77.3
Solyc01g086750.4 Solanum lycopersicum HOM05D003599 ORTHO05D004221 7.2e-51 204.5 131 79.4
Sopen01g033750 Solanum pennellii HOM05D003599 ORTHO05D004221 7.2e-51 204.5 131 79.4
CAN.G1393.20 Capsicum annuum HOM05D003599 ORTHO05D004221 9.4e-51 204.1 131 79.4
Lj3g0018349 Lotus japonicus HOM05D003599 ORTHO05D004221 9.4e-51 204.1 134 75.4
RcHm_v2.0_Chr4g0410621 Rosa chinensis HOM05D003599 ORTHO05D004221 9.4e-51 204.1 131 76.3
Glyma.08G152400 Glycine max HOM05D003599 ORTHO05D004221 1.2e-50 203.8 134 74.6
Prupe.2G007800 Prunus persica HOM05D003599 ORTHO05D004221 1.2e-50 203.8 131 74.8
Ca_26231_v3 Cicer arietinum L. HOM05D003599 ORTHO05D004221 1.6e-50 203.4 134 73.9
vmacro13648 Vaccinium macrocarpon HOM05D003599 ORTHO05D004221 2.1e-50 203.0 132 76.5
Atru.chr11.2631 Acer truncatum HOM05D003599 ORTHO05D004221 2.7e-50 202.6 134 73.1
CANSAT56G1134 Cannabis sativa HOM05D003599 ORTHO05D004221 2.7e-50 202.6 128 77.3
Phvul.005G037000 Phaseolus vulgaris HOM05D003599 ORTHO05D004221 2.7e-50 202.6 131 76.3
Thecc.01G414600 Theobroma cacao HOM05D003599 ORTHO05D004221 4.7e-50 201.8 131 74.8
SGA_v2.0_scaffold5G03126 Striga asiatica HOM05D003599 ORTHO05D004221 6.1e-50 201.4 131 77.9
GSVIVG01032046001 Vitis vinifera HOM05D003599 ORTHO05D004221 1.0e-49 200.7 131 75.6
ATR0605G051 Amborella trichopoda HOM05D003599 ORTHO05D004221 1.4e-49 200.3 137 70.8
COL.COLO4_23904 Corchorus olitorius HOM05D003599 ORTHO05D004221 1.8e-49 199.9 131 74.8
TWI73G0659 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 2.3e-49 199.5 130 74.6
CiPaw.13G001900 Carya illinoinensis HOM05D003599 ORTHO05D004221 3.9e-49 198.7 131 73.3
ClCG10G012550 Citrullus lanatus HOM05D003599 ORTHO05D004221 3.9e-49 198.7 132 73.5
FAN22G1903 Fragaria x ananassa HOM05D003599 ORTHO05D004221 3.9e-49 198.7 130 74.6
Psat5g207160 Pisum sativum HOM05D003599 ORTHO05D004221 3.9e-49 198.7 131 74.0
PGR044G0248 Punica granatum HOM05D003599 ORTHO05D004221 5.1e-49 198.4 125 75.2
TPR.G26308 Trifolium pratense HOM05D003599 ORTHO05D004221 5.1e-49 198.4 134 73.1
FAN07G2146 Fragaria x ananassa HOM05D003599 ORTHO05D004221 6.7e-49 198.0 130 74.6
FAN12G0010 Fragaria x ananassa HOM05D003599 ORTHO05D004221 6.7e-49 198.0 129 75.2
FAN12G0382 Fragaria x ananassa HOM05D003599 ORTHO05D004221 6.7e-49 198.0 129 75.2
Sabra16G0166600 Salix brachista HOM05D003599 ORTHO05D004221 6.7e-49 198.0 130 75.4
MELO3C023955.2 Cucumis melo HOM05D003599 ORTHO05D004221 8.8e-49 197.6 132 72.7
CsaV3_3G032340 Cucumis sativus L. HOM05D003599 ORTHO05D004221 8.8e-49 197.6 132 72.7
DCAR_029635 Daucus carota HOM05D003599 ORTHO05D004221 8.8e-49 197.6 132 75.8
Lalb_Chr20g0108091 Lupinus albus HOM05D003599 ORTHO05D004221 8.8e-49 197.6 134 73.9
Medtr3g027610 Medicago truncatula HOM05D003599 ORTHO05D004221 8.8e-49 197.6 130 73.1
TPR.G12253 Trifolium pratense HOM05D003599 ORTHO05D004221 8.8e-49 197.6 131 74.0
FvH4_4g12380 Fragaria vesca HOM05D003599 ORTHO05D004221 1.1e-48 197.2 129 75.2
FAN17G0189 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.1e-48 197.2 130 74.6
Lalb_Chr25g0283241 Lupinus albus HOM05D003599 ORTHO05D004221 1.1e-48 197.2 134 73.1
Potri.001G271200 Populus trichocarpa HOM05D003599 ORTHO05D004221 1.1e-48 197.2 130 74.6
arahy.Tifrunner.gnm1.ann1.V362W9 Arachis hypogaea HOM05D003599 ORTHO05D004221 2.0e-48 196.4 131 71.8
EL10Ac2g04309 Beta vulgaris HOM05D003599 ORTHO05D004221 2.0e-48 196.4 127 74.0
Potri.009G065300 Populus trichocarpa HOM05D003599 ORTHO05D004221 2.6e-48 196.1 130 75.4
Zm00001eb252790 Zea mays HOM05D003599 ORTHO05D004221 4.4e-48 195.3 131 71.0
Eucgr.J01252 Eucalyptus grandis HOM05D003599 ORTHO05D004221 5.7e-48 194.9 125 75.2
PSO384G0358 Papaver somniferum HOM05D003599 ORTHO05D004221 5.7e-48 194.9 130 74.6
AUR62023049 Chenopodium quinoa HOM05D003599 ORTHO05D004221 7.4e-48 194.5 127 74.0
THA.LOC104801983 Tarenaya hassleriana HOM05D003599 ORTHO05D004221 7.4e-48 194.5 131 71.8
PSO339G0158 Papaver somniferum HOM05D003599 ORTHO05D004221 9.7e-48 194.1 130 73.8
Manes.07G003200 Manihot esculenta HOM05D003599 ORTHO05D004221 2.2e-47 193.0 121 77.7
Sed0009971 Sechium edule HOM05D003599 ORTHO05D004221 2.8e-47 192.6 132 71.2
MBI01_g25789_MAGBIO Magnolia biondii HOM05D003599 ORTHO05D004221 4.8e-47 191.8 124 74.2
Sabra09G0048500 Salix brachista HOM05D003599 ORTHO05D004221 6.3e-47 191.4 119 80.7
Thhalv10010065m.g Eutrema salsugineum HOM05D003599 ORTHO05D004221 8.2e-47 191.0 131 71.0
Sc11g0009360 Simmondsia chinensis HOM05D003599 ORTHO05D004221 1.4e-46 190.3 121 76.9
CARHR161880 Cardamine hirsuta HOM05D003599 ORTHO05D004221 1.8e-46 189.9 131 70.2
Aa31LG10G7230 Aethionema arabicum HOM05D003599 ORTHO05D004221 2.4e-46 189.5 131 69.5
AL5G32710 Arabidopsis lyrata HOM05D003599 ORTHO05D004221 2.4e-46 189.5 131 70.2
AT3G52140 Arabidopsis thaliana HOM05D003599 ORTHO05D004221 2.4e-46 189.5 131 70.2
Carub.0005s1848 Capsella rubella HOM05D003599 ORTHO05D004221 2.4e-46 189.5 131 70.2
AUR62009368 Chenopodium quinoa HOM05D003599 ORTHO05D004221 4.1e-46 188.7 127 71.7
Sp5g10140 Schrenkiella parvula HOM05D003599 ORTHO05D004221 5.3e-46 188.3 131 70.2
Os02g0717400 Oryza sativa ssp. japonica HOM05D003599 ORTHO05D004221 7.0e-46 188.0 132 67.4
SGA_v2.0_scaffold260G45866 Striga asiatica HOM05D003599 ORTHO05D004221 7.0e-46 188.0 166 62.0
Lj3g0008997 Lotus japonicus HOM05D003599 ORTHO05D004221 2.0e-45 186.4 133 71.4
C08p27410 Brassica napus HOM05D003599 ORTHO05D004221 2.6e-45 186.0 131 68.7
Aqoxy1G00213 Aquilegia oxysepala HOM05D003599 ORTHO05D004221 7.7e-45 184.5 130 67.7
BraA09t39983Z Brassica rapa HOM05D003599 ORTHO05D004221 7.7e-45 184.5 131 67.9
BraA04t16417Z Brassica rapa HOM05D003599 ORTHO05D004221 1.0e-44 184.1 132 68.2
Sed0001465 Sechium edule HOM05D003599 ORTHO05D004221 1.3e-44 183.7 132 67.4
HPP92_003005 Vanilla planifolia HOM05D003599 ORTHO05D004221 1.7e-44 183.3 121 73.6
HPP92_003007 Vanilla planifolia HOM05D003599 ORTHO05D004221 1.7e-44 183.3 121 73.6
SHI28919 Sapria himalayana HOM05D003599 ORTHO05D004221 2.2e-44 183.0 131 67.9
BolC8t50358H Brassica oleracea HOM05D003599 ORTHO05D004221 3.8e-44 182.2 131 67.9
arahy.Tifrunner.gnm1.ann1.X69RYV Arachis hypogaea HOM05D003599 ORTHO05D004221 5.0e-44 181.8 158 59.5
A04p07220 Brassica napus HOM05D003599 ORTHO05D004221 5.0e-44 181.8 132 67.4
BcaC02g09276 Brassica carinata HOM05D003599 ORTHO05D004221 6.5e-44 181.4 132 67.4
C04p40780 Brassica napus HOM05D003599 ORTHO05D004221 6.5e-44 181.4 132 67.4
BolC4t25662H Brassica oleracea HOM05D003599 ORTHO05D004221 6.5e-44 181.4 132 67.4
Zm00001eb189030 Zea mays HOM05D003599 ORTHO05D004221 6.5e-44 181.4 128 68.0
A09p45200 Brassica napus HOM05D003599 ORTHO05D004221 7.2e-43 177.9 131 67.2
BcaB02g08585 Brassica carinata HOM05D003599 ORTHO05D004221 9.4e-43 177.6 121 71.1
Ah.10g024830 Amaranthus hybridus HOM05D003599 ORTHO05D004221 1.4e-41 173.7 153 58.8
arahy.Tifrunner.gnm1.ann1.SKP1EQ Arachis hypogaea HOM05D003599 ORTHO05D004221 3.7e-39 165.6 130 62.3
CDE05G2577 Ceratophyllum demersum HOM05D003599 ORTHO05D004221 1.4e-38 163.7 147 60.5
arahy.Tifrunner.gnm1.ann1.7I49QA Arachis hypogaea HOM05D003599 ORTHO05D004221 1.8e-38 163.3 130 61.5
SEGI_10833 Sequoiadendron giganteum HOM05D003599 ORTHO05D004221 4.1e-38 162.2 132 58.3
Pp3c16_5830 Physcomitrium patens HOM05D003599 ORTHO05D004221 1.3e-36 157.1 123 59.3
Mapoly0060s0041 Marchantia polymorpha HOM05D003599 ORTHO05D004221 1.2e-34 150.6 126 55.6
Actinidia31047 Actinidia chinensis HOM05D003599 ORTHO05D004221 2.1e-34 149.8 94 76.6
CBR_g110 Chara braunii HOM05D003599 ORTHO05D004221 2.2e-28 129.8 117 51.3
unitig_0.g1376 Utricularia gibba HOM05D003599 ORTHO05D004221 3.8e-28 129.0 130 55.4
BcaNung06096 Brassica carinata HOM05D003599 ORTHO05D004221 1.6e-26 123.6 86 66.3
unitig_61.g26447 Utricularia gibba HOM05D003599 ORTHO05D004221 5.2e-25 118.6 112 55.4
SMO141G0154 Selaginella moellendorffii HOM05D003599 ORTHO05D004221 1.2e-21 107.5 94 54.3
Actinidia32321 Actinidia chinensis HOM05D003599 ORTHO05D004221 2.2e-15 86.7 50 88.0
BcaB05g24178 Brassica carinata HOM05D004010 ORTHO05D027244 1.2e-13 80.9 58 67.2
Actinidia32320 Actinidia chinensis HOM05D003599 ORTHO05D004221 2.9e-07 59.7 39 69.2


User provided reference genes

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