Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0377211 Helianthus annuus HOM05D005680 ORTHO05D006334 4.1e-44 181.0 93 100.0
ECA246G0256 Erigeron canadensis HOM05D005680 ORTHO05D006334 2.1e-24 115.5 104 62.5
CAN.G1075.10 Capsicum annuum HOM05D005680 ORTHO05D006334 5.1e-18 94.4 83 59.0
Sopen02g037260 Solanum pennellii HOM05D005680 ORTHO05D006334 1.5e-17 92.8 90 55.6
PGSC0003DMG400024942 Solanum tuberosum HOM05D005680 ORTHO05D006334 4.3e-17 91.3 90 55.6
Oeu013277.1 Olea europaea HOM05D005680 ORTHO05D006334 7.3e-17 90.5 88 56.8
SalBow5G4637 Salvia bowleyana HOM05D005680 ORTHO05D006334 1.1e-15 86.7 91 50.5
EL10Ac6g15662 Beta vulgaris HOM05D005680 ORTHO05D006334 6.8e-15 84.0 88 55.7
Nitab4.5_0007941g0020 Nicotiana tabacum HOM05D005680 ORTHO05D006334 8.9e-15 83.6 64 67.2
Nitab4.5_0003878g0080 Nicotiana tabacum HOM05D005680 ORTHO05D006334 1.2e-14 83.2 63 68.3
AUR62003966 Chenopodium quinoa HOM05D005680 ORTHO05D006334 3.4e-14 81.6 97 51.5
AUR62038279 Chenopodium quinoa HOM05D005680 ORTHO05D006334 5.8e-14 80.9 97 51.5
Nitab4.5_0000419g0130 Nicotiana tabacum HOM05D005680 ORTHO05D006334 5.8e-14 80.9 54 70.4
Duzib147G0030 Durio zibethinus HOM05D005680 ORTHO05D006334 7.6e-14 80.5 93 53.8
Gohir.D11G205900 Gossypium hirsutum HOM05D005680 ORTHO05D006334 1.3e-13 79.7 84 51.2
Gorai.007G221000 Gossypium raimondii HOM05D005680 ORTHO05D006334 1.3e-13 79.7 84 51.2
Lj4g0022522 Lotus japonicus HOM05D005680 ORTHO05D006334 1.3e-13 79.7 87 52.9
Thecc.01G068000 Theobroma cacao HOM05D005680 ORTHO05D006334 1.3e-13 79.7 89 55.1
Gohir.A11G217600 Gossypium hirsutum HOM05D005680 ORTHO05D006334 2.2e-13 79.0 79 53.2
DCAR_003112 Daucus carota HOM05D005680 ORTHO05D006334 2.9e-13 78.6 54 70.4
Lj2g0023086 Lotus japonicus HOM05D005680 ORTHO05D006334 2.9e-13 78.6 80 57.5
Glyma.05G103100 Glycine max HOM05D005680 ORTHO05D006334 3.8e-13 78.2 89 53.9
Rhsim10G0104100 Rhododendron simsii HOM05D003166 ORTHO05D003605 3.8e-13 78.2 63 63.5
CANSAT01G2162 Cannabis sativa HOM05D005680 ORTHO05D006334 6.4e-13 77.4 85 55.3
Manes.12G112300 Manihot esculenta HOM05D005680 ORTHO05D006334 6.4e-13 77.4 67 64.2
TAR625G0576 Trochodendron aralioides HOM05D005680 ORTHO05D006334 3.2e-12 75.1 85 51.8
Cpa.g.sc6.54 Carica papaya HOM05D005680 ORTHO05D006334 4.2e-12 74.7 48 72.9
Nn1g04629 Nelumbo nucifera HOM05D005680 ORTHO05D006334 4.2e-12 74.7 59 66.1
SalBow1G8512 Salvia bowleyana HOM05D005680 ORTHO05D006334 4.2e-12 74.7 73 54.8
Ah.03g146390 Amaranthus hybridus HOM05D005680 ORTHO05D006334 5.4e-12 74.3 71 53.5
arahy.Tifrunner.gnm1.ann1.C6RKPL Arachis hypogaea HOM05D005680 ORTHO05D006334 5.4e-12 74.3 85 52.9
Lalb_Chr05g0226041 Lupinus albus HOM05D005680 ORTHO05D006334 5.4e-12 74.3 89 50.6
Potri.005G145200 Populus trichocarpa HOM05D005680 ORTHO05D006334 5.4e-12 74.3 61 65.6
Glyma.17G164200 Glycine max HOM05D005680 ORTHO05D006334 7.1e-12 73.9 83 54.2
THA.LOC104806914 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 7.1e-12 73.9 50 74.0
COL.COLO4_11529 Corchorus olitorius HOM05D005680 ORTHO05D006334 1.2e-11 73.2 73 52.1
TAR376G0914 Trochodendron aralioides HOM05D005680 ORTHO05D006334 1.6e-11 72.8 61 60.7
TAR628G1700 Trochodendron aralioides HOM05D005680 ORTHO05D006334 1.6e-11 72.8 61 60.7
Eucgr.H02278 Eucalyptus grandis HOM05D005680 ORTHO05D006334 2.1e-11 72.4 73 57.5
COL.COLO4_17729 Corchorus olitorius HOM05D005680 ORTHO05D006334 2.7e-11 72.0 65 60.0
Gohir.D04G176700 Gossypium hirsutum HOM05D005680 ORTHO05D006334 3.5e-11 71.6 56 60.7
Phvul.003G237400 Phaseolus vulgaris HOM05D005680 ORTHO05D006334 3.5e-11 71.6 58 63.8
Haze_15319 Corylus avellana HOM05D005680 ORTHO05D006334 4.6e-11 71.2 88 52.3
Gorai.012G169600 Gossypium raimondii HOM05D005680 ORTHO05D006334 4.6e-11 71.2 56 58.9
PGR102G2721 Punica granatum HOM05D005680 ORTHO05D006334 4.6e-11 71.2 48 75.0
Sabra05G0114900 Salix brachista HOM05D005680 ORTHO05D006334 6.0e-11 70.9 57 68.4
Gohir.A04G133600 Gossypium hirsutum HOM05D005680 ORTHO05D006334 7.8e-11 70.5 52 61.5
MD02G1181800 Malus domestica HOM05D005680 ORTHO05D006334 7.8e-11 70.5 78 50.0
TPR.G23854 Trifolium pratense HOM05D005680 ORTHO05D006334 7.8e-11 70.5 89 50.6
BcaB06g28712 Brassica carinata HOM05D005680 ORTHO05D006334 1.0e-10 70.1 52 63.5
BcaC01g05829 Brassica carinata HOM05D005680 ORTHO05D006334 1.0e-10 70.1 52 63.5
C03p22000 Brassica napus HOM05D005680 ORTHO05D006334 1.0e-10 70.1 52 63.5
Sabra05G0116000 Salix brachista HOM05D005680 ORTHO05D006334 1.0e-10 70.1 57 68.4
Sc19g0003710 Simmondsia chinensis HOM05D005680 ORTHO05D006334 1.0e-10 70.1 56 64.3
Ca_13933_v3 Cicer arietinum L. HOM05D005680 ORTHO05D006334 1.3e-10 69.7 79 53.2
Sp4g16030 Schrenkiella parvula HOM05D005680 ORTHO05D006334 1.3e-10 69.7 54 61.1
TWI09G1440 Tripterygium wilfordii HOM05D005680 ORTHO05D006334 1.3e-10 69.7 86 48.8
Atru.chr3.206 Acer truncatum HOM05D005680 ORTHO05D006334 1.7e-10 69.3 90 46.7
Sc25g0001410 Simmondsia chinensis HOM05D005680 ORTHO05D006334 1.7e-10 69.3 76 53.9
Thecc.02G019100 Theobroma cacao HOM05D005680 ORTHO05D006334 1.7e-10 69.3 59 59.3
arahy.Tifrunner.gnm1.ann1.Y5V9TA Arachis hypogaea HOM05D005680 ORTHO05D006334 3.0e-10 68.6 85 51.8
Ciclev10026786m.g Citrus clementina HOM05D005680 ORTHO05D006334 3.0e-10 68.6 84 48.8
Eucgr.H02273 Eucalyptus grandis HOM05D005680 ORTHO05D006334 3.0e-10 68.6 55 63.6
Psat7g075160 Pisum sativum HOM05D005680 ORTHO05D006334 3.0e-10 68.6 50 66.0
A04p25910 Brassica napus HOM05D005680 ORTHO05D006334 3.9e-10 68.2 47 68.1
BraA04t18094Z Brassica rapa HOM05D005680 ORTHO05D006334 3.9e-10 68.2 47 68.1
Sabra02G0004200 Salix brachista HOM05D005680 ORTHO05D006334 3.9e-10 68.2 61 57.4
Atru.chr13.75 Acer truncatum HOM05D005680 ORTHO05D006334 5.1e-10 67.8 87 46.0
BcaB01g03924 Brassica carinata HOM05D005680 ORTHO05D006334 5.1e-10 67.8 52 59.6
Aqoxy507s001 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 6.6e-10 67.4 73 50.7
Aqoxy5G00968 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 6.6e-10 67.4 73 50.7
Potri.002G006000 Populus trichocarpa HOM05D005680 ORTHO05D006334 6.6e-10 67.4 61 57.4
SHI12592 Sapria himalayana HOM05D005680 ORTHO05D006334 6.6e-10 67.4 58 55.2
BcaC02g07811 Brassica carinata HOM05D005680 ORTHO05D006334 8.7e-10 67.0 52 61.5
C04p63190 Brassica napus HOM05D005680 ORTHO05D006334 8.7e-10 67.0 52 61.5
PGR031G2681 Punica granatum HOM05D005680 ORTHO05D006334 8.7e-10 67.0 52 63.5
Aqoxy7G01353 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 1.1e-09 66.6 68 54.4
AL4G29360 Arabidopsis lyrata HOM05D005680 ORTHO05D006334 1.1e-09 66.6 49 63.3
Thhalv10017732m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 1.1e-09 66.6 54 57.4
Medtr4g095330 Medicago truncatula HOM05D005680 ORTHO05D006334 1.1e-09 66.6 100 45.0
TPR.G11882 Trifolium pratense HOM05D005680 ORTHO05D006334 1.1e-09 66.6 74 50.0
Ca_17983_v3 Cicer arietinum L. HOM05D005680 ORTHO05D006334 1.5e-09 66.2 86 51.2
Duzib052G1168 Durio zibethinus HOM05D005680 ORTHO05D006334 1.5e-09 66.2 69 53.6
Carub.0004s1530 Capsella rubella HOM05D005680 ORTHO05D006334 1.9e-09 65.9 62 56.5
MELO3C007608.2 Cucumis melo HOM05D005680 ORTHO05D006334 1.9e-09 65.9 77 46.8
MD15G1292700 Malus domestica HOM05D005680 ORTHO05D006334 4.3e-09 64.7 51 62.7
Prupe.6G224700 Prunus persica HOM05D005680 ORTHO05D006334 4.3e-09 64.7 78 47.4
CARHR127690 Cardamine hirsuta HOM05D005680 ORTHO05D006334 5.6e-09 64.3 62 54.8
ClCG11G018960 Citrullus lanatus HOM05D005680 ORTHO05D006334 5.6e-09 64.3 94 45.7
Aa31LG9G13590 Aethionema arabicum HOM05D005680 ORTHO05D006334 7.3e-09 63.9 49 61.2
AT2G33690 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 7.3e-09 63.9 62 54.8
FAN23G0577 Fragaria x ananassa HOM05D005680 ORTHO05D006334 7.3e-09 63.9 87 46.0
FAN28G2165 Fragaria x ananassa HOM05D005680 ORTHO05D006334 7.3e-09 63.9 87 46.0
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 9.6e-09 63.5 58 58.6
ClCG01G017300 Citrullus lanatus HOM05D005680 ORTHO05D006334 9.6e-09 63.5 76 44.7
RcHm_v2.0_Chr2g0107321 Rosa chinensis HOM05D005680 ORTHO05D006334 9.6e-09 63.5 91 49.5
FAN02G2432 Fragaria x ananassa HOM05D005680 ORTHO05D006334 2.1e-08 62.4 76 46.1
FAN26G2100 Fragaria x ananassa HOM05D005680 ORTHO05D006334 2.1e-08 62.4 76 46.1
PSO063G6705 Papaver somniferum HOM05D005680 ORTHO05D006334 2.1e-08 62.4 69 52.2
CsaV3_6G043830 Cucumis sativus L. HOM05D005680 ORTHO05D006334 2.8e-08 62.0 60 51.7
Cpa.g.sc88.61 Carica papaya HOM05D005680 ORTHO05D006334 4.8e-08 61.2 57 56.1
MELO3C017050.2 Cucumis melo HOM05D005680 ORTHO05D006334 6.2e-08 60.8 85 43.5
FvH4_1g17140 Fragaria vesca HOM05D005680 ORTHO05D006334 6.2e-08 60.8 87 43.7
Lsat_1_v5_gn_3_87720 Lactuca sativa HOM05D005680 ORTHO05D006334 6.2e-08 60.8 41 65.9
Medtr8g081540 Medicago truncatula HOM05D005680 ORTHO05D006334 6.2e-08 60.8 71 47.9
QL02p015306 Quercus lobata HOM05D005680 ORTHO05D006334 6.2e-08 60.8 59 57.6
Sed0000508 Sechium edule HOM05D005680 ORTHO05D006334 8.1e-08 60.5 78 46.2
HPP92_012496 Vanilla planifolia HOM05D005680 ORTHO05D006334 1.4e-07 59.7 55 52.7
FAN19G0782 Fragaria x ananassa HOM05D005680 ORTHO05D006334 2.4e-07 58.9 87 43.7
CsaV3_4G037560 Cucumis sativus L. HOM05D005680 ORTHO05D006334 5.3e-07 57.8 85 42.4
Psat4g083200 Pisum sativum HOM05D005680 ORTHO05D006334 5.3e-07 57.8 79 49.4
Dinv38141 Davidia involucrata HOM05D000032 ORTHO05D004656 2.0e-06 55.8 74 45.9
Carub.0004s0232 Capsella rubella HOM05D005680 ORTHO05D006334 2.6e-06 55.5 86 41.9
CDE04G1110 Ceratophyllum demersum HOM05D005680 ORTHO05D006334 2.6e-06 55.5 53 56.6
Nn1g04362 Nelumbo nucifera HOM05D005680 ORTHO05D006334 2.6e-06 55.5 58 51.7
AT2G23110 Arabidopsis thaliana HOM05D005680 ORTHO05D006334 7.6e-06 53.9 91 41.8


User provided reference genes

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