Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.6e-138 496.1 260 100.0
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 3.8e-87 325.5 217 80.6
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 4.6e-85 318.5 264 68.2
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 8.7e-76 287.7 239 67.4
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 2.1e-74 283.1 227 67.4
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 6.9e-73 278.1 227 69.2
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.5e-72 276.9 238 66.8
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 2.6e-72 276.2 213 69.5
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 6.5e-71 271.6 249 61.4
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 5.5e-70 268.5 253 59.7
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 7.2e-70 268.1 243 62.6
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.1e-69 266.5 240 63.3
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 3.6e-69 265.8 220 66.4
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 7.9e-69 264.6 251 62.2
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 7.9e-69 264.6 225 61.8
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 1.0e-68 264.2 230 64.8
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.0e-68 264.2 227 65.6
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 1.0e-68 264.2 222 68.5
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.8e-68 263.5 233 64.8
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.9e-68 262.3 233 64.4
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 3.9e-68 262.3 212 67.5
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.1e-67 260.8 234 64.5
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.5e-67 260.4 255 60.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.5e-67 260.4 227 62.6
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 2.5e-67 259.6 230 64.3
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 9.7e-67 257.7 226 61.1
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.3e-66 257.3 237 61.6
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 3.7e-66 255.8 259 56.8
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 8.2e-66 254.6 220 62.7
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 8.2e-66 254.6 211 67.8
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.1e-65 254.2 211 67.3
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.1e-65 254.2 211 67.3
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.4e-65 253.8 224 62.9
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.4e-65 253.8 224 62.9
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.1e-65 252.7 213 65.3
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 4.1e-65 252.3 213 65.3
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.5e-64 250.4 267 56.2
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 4.5e-64 248.8 225 60.9
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 2.9e-63 246.1 238 59.7
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 3.8e-63 245.7 220 64.1
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.9e-62 243.4 222 60.4
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 2.5e-62 243.0 218 61.5
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.2e-61 240.7 281 53.4
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.7e-61 239.6 217 60.4
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.4e-60 237.3 190 68.9
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 8.8e-60 234.6 226 60.2
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 8.8e-60 234.6 237 59.5
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 8.8e-60 234.6 195 66.2
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 7.4e-59 231.5 192 64.6
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 7.4e-59 231.5 208 59.6
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 8.2e-58 228.0 228 58.8
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.8e-57 226.9 256 55.9
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 5.3e-57 225.3 190 67.4
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 5.3e-57 225.3 262 54.6
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.2e-56 224.2 215 60.0
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.5e-56 222.2 183 67.2
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 2.9e-55 219.5 234 51.7
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.2e-53 214.2 193 64.2
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 1.8e-52 210.3 250 53.2
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 6.7e-52 208.4 238 54.6
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.6e-51 206.5 198 60.6
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 2.6e-51 206.5 178 62.9
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 9.7e-51 204.5 202 56.4
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 7.0e-49 198.4 189 60.8
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.6e-48 197.2 170 64.1
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 2.0e-48 196.8 157 65.6
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.9e-46 190.3 149 66.4
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 5.2e-44 182.2 211 42.2
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 6.7e-44 181.8 203 54.7
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 3.3e-43 179.5 207 44.0
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 3.7e-42 176.0 216 44.0
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 1.3e-39 167.5 183 48.1
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.9e-38 163.7 206 51.0
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 8.8e-36 154.8 131 59.5
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 1.1e-33 147.9 156 56.4
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 4.5e-32 142.5 98 73.5
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.5e-30 137.5 96 71.9
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.5e-30 137.5 108 69.4
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 1.6e-29 134.0 131 61.1
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 4.7e-29 132.5 123 61.8
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 4.1e-25 119.4 94 62.8
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 1.6e-24 117.5 87 66.7
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 1.1e-17 94.7 198 29.3
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.0e-16 90.5 78 61.5
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 3.3e-14 83.2 60 68.3
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 4.3e-14 82.8 198 25.8
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 7.3e-14 82.0 80 57.5
HanXRQChr11g0352371 Helianthus annuus HOM05D007678 ORTHO05D009658 4.7e-13 79.3 52 78.8
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.4e-12 77.8 59 72.9
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 4.9e-10 69.3 64 60.9
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 7.0e-09 65.5 56 66.1
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 1.3e-07 61.2 64 59.4
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 1.7e-07 60.8 89 46.1
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 2.3e-07 60.5 59 57.6
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 5.0e-07 59.3 55 58.2
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 6.6e-07 58.9 68 54.4


User provided reference genes

Program Settings