Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 3.0e-67 258.5 139 100.0
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.2e-50 203.4 140 80.0
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.5e-50 203.0 135 82.2
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.4e-48 196.4 133 79.7
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 6.6e-46 187.6 132 79.5
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 4.1e-40 168.3 147 66.7
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.6e-39 166.4 152 65.8
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 3.5e-39 165.2 142 66.9
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 2.3e-38 162.5 134 69.4
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 6.6e-38 161.0 134 67.9
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 1.5e-37 159.8 149 64.4
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.9e-37 159.5 148 62.2
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.9e-37 159.5 137 66.4
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 2.5e-37 159.1 140 64.3
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.5e-37 159.1 140 64.3
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 3.3e-37 158.7 140 64.3
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 4.3e-37 158.3 142 65.5
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 4.3e-37 158.3 141 64.5
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 4.3e-37 158.3 137 61.3
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 5.6e-37 157.9 142 66.9
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 9.5e-37 157.1 144 62.5
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 9.5e-37 157.1 138 61.6
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 1.6e-36 156.4 143 64.3
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.6e-36 156.4 152 63.8
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.8e-36 155.6 140 63.6
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 2.8e-36 155.6 146 62.3
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 4.7e-36 154.8 146 62.3
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 4.7e-36 154.8 151 62.3
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 6.2e-36 154.5 137 65.7
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 8.1e-36 154.1 141 63.1
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 1.1e-35 153.7 137 59.9
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.4e-35 153.3 137 66.4
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.8e-35 152.9 147 61.9
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 1.8e-35 152.9 144 62.5
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.8e-35 152.9 139 64.0
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 4.0e-35 151.8 139 61.2
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 4.0e-35 151.8 139 61.2
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 5.2e-35 151.4 143 60.8
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 6.8e-35 151.0 136 61.0
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 6.8e-35 151.0 136 61.8
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 6.8e-35 151.0 142 62.7
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 6.8e-35 151.0 142 62.0
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 6.8e-35 151.0 143 62.9
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 6.8e-35 151.0 138 58.7
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.2e-34 150.2 147 61.2
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 1.2e-34 150.2 160 57.5
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.2e-34 150.2 144 61.1
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.5e-34 149.8 135 63.0
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 1.5e-34 149.8 137 60.6
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 2.0e-34 149.4 145 61.4
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 2.0e-34 149.4 137 59.9
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 2.6e-34 149.1 152 58.6
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 2.6e-34 149.1 133 63.2
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 3.4e-34 148.7 143 60.8
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 4.4e-34 148.3 138 60.9
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 4.4e-34 148.3 144 57.6
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 4.4e-34 148.3 142 61.3
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 5.8e-34 147.9 138 60.1
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 7.5e-34 147.5 140 59.3
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.8e-34 147.1 145 57.9
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 9.8e-34 147.1 145 57.9
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.3e-33 146.7 147 61.2
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.3e-33 146.7 147 61.2
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 1.3e-33 146.7 149 59.7
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 1.3e-33 146.7 146 58.9
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 2.2e-33 146.0 137 59.9
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 2.9e-33 145.6 134 61.9
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 3.7e-33 145.2 151 57.6
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.7e-33 145.2 134 61.9
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 3.7e-33 145.2 151 58.9
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.9e-33 144.8 128 65.6
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 6.4e-33 144.4 159 54.7
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 8.3e-33 144.1 124 66.9
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 1.1e-32 143.7 132 60.6
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.4e-32 143.3 136 61.0
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 1.9e-32 142.9 154 57.8
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 1.9e-32 142.9 140 59.3
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 1.9e-32 142.9 145 57.9
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.9e-32 142.9 146 61.0
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.4e-32 142.5 124 66.1
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.4e-32 142.5 145 61.4
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 2.4e-32 142.5 148 56.8
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 3.2e-32 142.1 150 56.0
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 1.2e-31 140.2 141 59.6
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.2e-31 140.2 136 61.0
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.2e-31 140.2 134 61.2
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 4.6e-31 138.3 141 60.3
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 7.8e-31 137.5 153 52.9
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 1.3e-30 136.7 134 59.0
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.9e-30 135.2 148 54.1
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 5.1e-30 134.8 133 54.9
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 5.1e-30 134.8 130 59.2
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 2.1e-28 129.4 143 55.9
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 2.8e-28 129.0 130 60.0
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 3.6e-28 128.6 135 56.3
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 3.6e-28 128.6 139 57.6
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 6.2e-28 127.9 129 58.1
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 1.1e-27 127.1 129 58.1
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.8e-27 126.3 129 56.6
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 2.3e-27 125.9 144 52.1
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 6.8e-27 124.4 129 55.0
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 6.8e-27 124.4 129 55.0
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 6.8e-27 124.4 129 55.0
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 6.8e-27 124.4 129 55.0
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 6.8e-27 124.4 129 57.4
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 2.0e-26 122.9 138 52.9
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 3.4e-26 122.1 133 52.6
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 5.8e-26 121.3 129 55.8
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 5.8e-26 121.3 136 55.9
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 2.7e-23 112.5 144 52.8
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 4.6e-23 111.7 128 49.2
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 6.0e-23 111.3 145 49.7
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 1.0e-22 110.5 127 53.5
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 1.7e-22 109.8 138 49.3
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 3.6e-20 102.1 127 50.4
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.8e-19 99.8 109 55.0
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 1.8e-19 99.8 110 55.5
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 2.4e-19 99.4 130 53.1
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 5.2e-19 98.2 135 43.7
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 1.5e-18 96.7 144 44.4
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 2.0e-18 96.3 133 48.1
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 2.2e-17 92.8 111 51.4
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 3.9e-14 82.0 114 46.5
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 2.5e-13 79.3 49 81.6
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 4.0e-11 72.0 54 68.5
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 2.0e-10 69.7 54 66.7
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 7.6e-10 67.8 128 38.3
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 6.4e-09 64.7 46 69.6
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.2e-07 60.5 45 60.0
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 6.0e-07 58.2 46 65.2
Zm00001eb181930 Zea mays HOM05D001107 ORTHO05D007353 1.0e-06 57.4 46 67.4


User provided reference genes

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