Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 1.2e-222 777.3 850 100.0
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 1.1e-90 339.0 851 75.0
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 2.7e-81 307.8 743 80.6
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 2.8e-70 271.2 862 68.4
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 1.7e-56 225.3 850 67.9
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 5.6e-55 220.3 855 66.9
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 5.6e-55 220.3 862 65.0
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 4.7e-54 217.2 860 68.3
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 6.2e-54 216.9 867 65.4
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 5.2e-53 213.8 861 65.0
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 1.2e-52 212.6 856 60.5
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 1.5e-52 212.2 866 66.1
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 1.3e-51 209.1 858 57.5
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 1.7e-51 208.8 852 68.0
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 6.4e-51 206.8 869 62.3
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 7.1e-50 203.4 845 63.1
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 9.2e-50 203.0 863 64.3
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 1.2e-49 202.6 889 64.5
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 1.0e-48 199.5 858 66.8
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 5.1e-48 197.2 855 62.2
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 8.7e-48 196.4 852 66.5
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 1.5e-47 195.7 857 66.3
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 1.9e-47 195.3 869 65.9
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 2.5e-47 194.9 865 66.4
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 7.3e-47 193.4 865 66.7
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 5.2e-45 187.2 187 51.3
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 9.0e-45 186.4 848 58.3
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 2.0e-44 185.3 856 62.3
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 5.8e-44 183.7 187 50.8
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 5.8e-44 183.7 175 53.7
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 7.6e-44 183.3 868 53.1
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 1.7e-43 182.2 179 50.8
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 8.4e-43 179.9 192 49.0
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 9.3e-42 176.4 176 51.7
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 2.1e-41 175.3 177 51.4
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 4.6e-41 174.1 189 47.1
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 1.0e-40 172.9 860 64.4
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 3.0e-40 171.4 177 49.7
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 3.9e-40 171.0 176 51.1
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 6.6e-40 170.2 798 68.3
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 8.7e-40 169.9 850 66.4
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 8.7e-40 169.9 175 49.7
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 8.7e-40 169.9 175 49.7
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 1.1e-39 169.5 177 47.5
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 1.5e-39 169.1 175 47.4
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 1.9e-39 168.7 177 47.5
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 1.9e-39 168.7 175 49.1
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 3.3e-39 167.9 173 49.1
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 3.3e-39 167.9 173 48.6
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 5.6e-39 167.2 175 46.9
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 9.6e-39 166.4 192 47.9
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 1.3e-38 166.0 850 66.1
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 1.6e-38 165.6 179 46.9
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 2.1e-38 165.2 175 46.9
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 2.1e-38 165.2 174 47.7
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 3.6e-38 164.5 184 46.7
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 4.8e-38 164.1 178 46.6
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.4e-37 162.5 838 66.6
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 1.8e-37 162.2 858 65.6
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 4.0e-37 161.0 177 46.3
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 6.9e-37 160.2 857 58.9
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 9.0e-37 159.8 178 46.6
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 1.2e-36 159.5 177 45.8
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 2.0e-36 158.7 850 65.8
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 2.0e-36 158.7 855 56.1
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 7.6e-36 156.8 838 66.1
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 9.9e-36 156.4 177 45.8
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 9.9e-36 156.4 186 43.0
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 2.9e-35 154.8 178 45.5
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 2.9e-35 154.8 183 44.3
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 6.4e-35 153.7 179 45.3
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 2.4e-34 151.8 171 43.9
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 2.4e-34 151.8 171 43.9
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 3.2e-34 151.4 854 61.9
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 4.2e-34 151.0 850 65.3
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 1.6e-33 149.1 171 45.0
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 3.5e-33 147.9 233 38.6
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 1.0e-32 146.4 177 44.1
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 1.0e-32 146.4 177 44.1
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 1.0e-32 146.4 177 44.1
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 1.0e-32 146.4 177 44.1
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 2.3e-32 145.2 177 45.2
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 3.9e-32 144.4 862 61.4
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.5e-31 142.5 185 43.8
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 2.8e-30 138.3 177 41.8
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 8.4e-27 126.7 172 38.4
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 1.6e-25 122.5 162 42.0
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 1.0e-24 119.8 148 43.2
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 4.8e-22 110.9 178 34.8
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 1.1e-21 109.8 121 47.1
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 6.9e-21 107.1 148 43.9
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 6.9e-21 107.1 152 40.1
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 6.9e-21 107.1 176 34.1
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 2.6e-20 105.1 184 34.2
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 4.5e-20 104.4 157 38.9
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 1.7e-19 102.4 149 40.3
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 3.8e-19 101.3 149 40.9
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 1.1e-18 99.8 144 38.9
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 9.3e-18 96.7 180 35.0
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 6.7e-16 90.5 109 47.7
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 1.3e-14 86.3 161 33.5
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 4.1e-13 81.3 147 34.0
Potri.011G108500 Populus trichocarpa HOM05D002453 ORTHO05D008746 6.1e-09 67.4 192 31.2
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 3.0e-08 65.1 119 34.5
Sabra11G0096300 Salix brachista HOM05D000891 ORTHO05D008746 8.8e-08 63.5 193 32.1
Hund15592 Selenicereus undatus HOM05D006569 ORTHO05D007515 4.3e-07 61.2 180 29.4
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 1.3e-06 59.7 64 42.2
FAN18G1604 Fragaria x ananassa HOM05D002453 ORTHO05D008746 1.7e-06 59.3 183 30.1
FAN18G1084 Fragaria x ananassa HOM05D002453 ORTHO05D008746 2.2e-06 58.9 179 30.7
CiPaw.11G159300 Carya illinoinensis HOM05D002453 ORTHO05D008746 4.8e-06 57.8 192 27.6
RcHm_v2.0_Chr7g0184831 Rosa chinensis HOM05D002453 ORTHO05D008746 4.8e-06 57.8 177 28.8
Manes.15G095900 Manihot esculenta HOM05D002453 ORTHO05D008746 6.3e-06 57.4 169 28.4
Nn6g34498 Nelumbo nucifera HOM05D002453 ORTHO05D008746 6.3e-06 57.4 173 28.9


User provided reference genes

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