Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0371741 Helianthus annuus HOM05D002813 ORTHO05D003203 1.6e-119 433.0 245 100.0
HanXRQChr12g0371761 Helianthus annuus HOM05D002813 ORTHO05D003203 6.0e-103 377.9 232 83.2
HanXRQChr12g0371751 Helianthus annuus HOM05D002813 ORTHO05D003203 2.8e-60 236.1 228 61.4
HanXRQChr12g0371771 Helianthus annuus HOM05D002813 ORTHO05D003203 7.7e-58 228.0 221 60.2
ECA248G1211 Erigeron canadensis HOM05D002813 ORTHO05D003203 1.7e-41 173.7 206 49.5
Lsat_1_v5_gn_6_23140 Lactuca sativa HOM05D002813 ORTHO05D003203 5.8e-37 158.7 173 46.8
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 2.6e-29 133.3 224 37.5
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 7.5e-29 131.7 176 40.3
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 3.2e-27 126.3 215 32.1
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 1.2e-26 124.4 221 33.5
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.1e-26 123.6 222 32.9
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 7.8e-26 121.7 221 32.6
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 3.9e-25 119.4 222 34.7
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 8.6e-25 118.2 221 32.1
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 4.3e-24 115.9 219 33.8
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 2.1e-23 113.6 224 34.8
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 2.8e-23 113.2 196 39.3
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 3.6e-23 112.8 199 32.2
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 3.6e-23 112.8 217 30.4
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 4.7e-23 112.5 222 41.9
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 4.7e-23 112.5 208 33.7
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 6.2e-23 112.1 195 38.5
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 1.8e-22 110.5 221 32.6
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.4e-22 110.2 200 33.5
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 8.9e-22 108.2 200 33.0
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 1.2e-21 107.8 197 36.0
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 4.4e-21 105.9 194 33.0
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 7.6e-21 105.1 199 37.7
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 9.9e-21 104.8 221 34.4
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 1.7e-20 104.0 184 31.5
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 2.9e-20 103.2 202 31.7
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 4.9e-20 102.4 200 36.5
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 1.4e-19 100.9 199 34.7
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 2.1e-18 97.1 222 34.7
CAN.G400.3 Capsicum annuum HOM05D002813 ORTHO05D003203 3.5e-18 96.3 146 37.7
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 6.0e-18 95.5 203 36.9
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 1.0e-17 94.7 204 34.8
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 8.7e-17 91.7 204 29.4
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 1.9e-16 90.5 195 34.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.5e-16 90.1 198 35.4
SEGI_23038 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 4.3e-16 89.4 143 34.3
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 5.6e-16 89.0 200 31.5
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-16 89.0 200 31.5
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-15 87.4 192 29.7
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-15 86.3 193 30.1
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-15 86.3 193 30.1
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 6.2e-15 85.5 214 29.9
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-15 85.5 200 30.0
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 8.1e-15 85.1 153 31.4
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 8.1e-15 85.1 218 33.5
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-14 84.3 172 32.0
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-14 84.3 172 32.0
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-14 84.3 205 29.3
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 5.2e-14 82.4 192 29.7
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-13 81.3 202 28.7
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-13 80.9 196 29.6
PGSC0003DMG400010583 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.6e-13 80.1 110 38.2
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-13 79.3 172 30.2
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 4.4e-13 79.3 195 27.7
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.8e-13 79.0 117 35.9
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 5.8e-13 79.0 105 37.1
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-12 77.4 172 30.8
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-12 77.4 172 30.2
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 1.7e-12 77.4 114 39.5
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-12 76.3 189 27.5
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 3.8e-12 76.3 197 25.4
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-11 74.7 195 32.3
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 3.2e-11 73.2 195 31.8
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 7.1e-11 72.0 112 36.6
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.1e-11 72.0 112 36.6
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.1e-11 72.0 112 36.6
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-11 71.6 194 40.7
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 1.2e-10 71.2 190 38.9
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-10 70.9 118 34.7
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-10 70.5 194 39.2
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-10 70.5 194 39.7
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-10 70.1 190 27.4
CAN.G953.3 Capsicum annuum HOM05D002813 ORTHO05D003203 3.5e-10 69.7 93 37.6
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.6e-10 69.3 112 34.8
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-10 68.9 208 28.4
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-10 68.9 185 28.1
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-10 68.9 129 31.0
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.8e-10 68.6 198 28.3
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-09 68.2 184 23.9
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-09 67.4 181 27.1
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-09 67.4 190 27.4
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-09 67.4 184 23.9
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-09 66.6 194 30.9
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-09 66.6 182 29.7
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 3.0e-09 66.6 192 27.1
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 3.9e-09 66.2 184 23.9
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 3.9e-09 66.2 194 31.4
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 3.3e-08 63.2 190 29.5
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 4.3e-08 62.8 207 26.1
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 4.3e-08 62.8 192 30.7
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 5.6e-08 62.4 205 26.3
FAN18G1397 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-08 62.4 85 37.6
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 7.3e-08 62.0 203 25.1
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 1.3e-07 61.2 200 25.5
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-07 60.8 196 31.6
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-07 60.5 192 26.0
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-07 60.5 192 26.0
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-07 58.9 190 34.7
FAN20G2843 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.2e-07 58.9 191 24.1
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-06 58.2 117 30.8
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-06 57.4 72 36.1
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 2.4e-06 57.0 157 36.9
Hund03802 Selenicereus undatus HOM05D002125 ORTHO05D002105 3.1e-06 56.6 235 26.0
Hund08778 Selenicereus undatus HOM05D003317 ORTHO05D003696 3.1e-06 56.6 162 29.6
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.0e-06 56.2 188 25.5
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-06 55.8 192 25.5
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-06 55.8 109 33.0
Gohir.A07G019500 Gossypium hirsutum HOM05D003317 ORTHO05D003696 5.3e-06 55.8 173 30.1
SalBow4G2763 Salvia bowleyana HOM05D002125 ORTHO05D002105 5.3e-06 55.8 216 27.3
vmacro20333 Vaccinium macrocarpon HOM05D002125 ORTHO05D002105 5.3e-06 55.8 201 26.4
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 6.9e-06 55.5 211 26.5
arahy.Tifrunner.gnm1.ann1.C19Y0U Arachis hypogaea HOM05D003317 ORTHO05D003696 9.0e-06 55.1 168 28.6
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 9.0e-06 55.1 211 26.1
Gohir.D07G019300 Gossypium hirsutum HOM05D003317 ORTHO05D003696 9.0e-06 55.1 173 29.5
MD12G1181200 Malus domestica HOM05D002125 ORTHO05D002105 9.0e-06 55.1 214 25.2


User provided reference genes

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