Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0371351 Helianthus annuus HOM05D002996 ORTHO05D003536 6.6e-31 136.7 69 100.0
HanXRQChr09g0262271 Helianthus annuus HOM05D002996 ORTHO05D003536 5.8e-11 70.5 41 85.4
Lsat_1_v5_gn_4_154680 Lactuca sativa HOM05D002996 ORTHO05D003536 8.4e-10 66.6 41 80.5
ECA232G3169 Erigeron canadensis HOM05D002996 ORTHO05D003536 3.2e-09 64.7 41 78.0
CiPaw.03G068800 Carya illinoinensis HOM05D002996 ORTHO05D003536 1.2e-08 62.8 41 75.6
Gohir.A11G162100 Gossypium hirsutum HOM05D002996 ORTHO05D003536 3.5e-08 61.2 41 73.2
Gohir.D11G168300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 3.5e-08 61.2 41 73.2
Gorai.007G179800 Gossypium raimondii HOM05D002996 ORTHO05D003536 3.5e-08 61.2 41 73.2
CAN.G625.86 Capsicum annuum HOM05D002996 ORTHO05D003536 4.6e-08 60.8 41 70.7
Cfa007838 Carpinus fangiana HOM05D002996 ORTHO05D003536 4.6e-08 60.8 41 73.2
Gorai.004G064500 Gossypium raimondii HOM05D002996 ORTHO05D003536 6.0e-08 60.5 41 73.2
Gohir.A08G052700 Gossypium hirsutum HOM05D002996 ORTHO05D003536 7.9e-08 60.1 41 73.2
Gohir.D08G062300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 7.9e-08 60.1 41 73.2
Solyc02g091410.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 7.9e-08 60.1 41 68.3
Sopen02g036030 Solanum pennellii HOM05D002996 ORTHO05D003536 7.9e-08 60.1 41 68.3
Haze_14227 Corylus avellana HOM05D002996 ORTHO05D003536 1.3e-07 59.3 41 70.7
Thecc.04G120500 Theobroma cacao HOM05D002996 ORTHO05D003536 1.3e-07 59.3 41 70.7
AUR62023190 Chenopodium quinoa HOM05D002996 ORTHO05D003536 1.8e-07 58.9 41 68.3
HanXRQChr07g0193641 Helianthus annuus HOM05D002996 ORTHO05D003536 1.8e-07 58.9 41 70.7
Rhsim08G0086100 Rhododendron simsii HOM05D002996 ORTHO05D003536 1.8e-07 58.9 41 68.3
AUR62023237 Chenopodium quinoa HOM05D002996 ORTHO05D003536 3.0e-07 58.2 41 65.9
MD17G1256700 Malus domestica HOM05D002996 ORTHO05D003536 3.0e-07 58.2 41 68.3
CSS0002683 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 3.9e-07 57.8 41 68.3
Manes.01G115900 Manihot esculenta HOM05D002996 ORTHO05D003536 3.9e-07 57.8 41 68.3
Peaxi162Scf00003g00013 Petunia axillaris HOM05D002996 ORTHO05D003536 3.9e-07 57.8 41 68.3
Actinidia17659 Actinidia chinensis HOM05D002996 ORTHO05D003536 5.1e-07 57.4 41 65.9
Duzib211G0161 Durio zibethinus HOM05D002996 ORTHO05D003536 5.1e-07 57.4 41 68.3
ECA238G4747 Erigeron canadensis HOM05D002996 ORTHO05D003536 5.1e-07 57.4 41 68.3
Manes.02G074800 Manihot esculenta HOM05D002996 ORTHO05D003536 5.1e-07 57.4 41 68.3
Dinv14879 Davidia involucrata HOM05D002996 ORTHO05D003536 6.7e-07 57.0 41 65.9
Duzib133G0038 Durio zibethinus HOM05D002996 ORTHO05D003536 6.7e-07 57.0 41 68.3
Manes.01G116000 Manihot esculenta HOM05D002996 ORTHO05D003536 6.7e-07 57.0 41 65.9
Nitab4.5_0003360g0070 Nicotiana tabacum HOM05D002996 ORTHO05D003536 6.7e-07 57.0 41 68.3
Nitab4.5_0004399g0040 Nicotiana tabacum HOM05D002996 ORTHO05D003536 6.7e-07 57.0 41 68.3
Peaxi162Scf00118g00223 Petunia axillaris HOM05D002996 ORTHO05D003536 6.7e-07 57.0 41 65.9
CAN.G11.11 Capsicum annuum HOM05D002996 ORTHO05D003536 8.7e-07 56.6 41 65.9
QL11p004079 Quercus lobata HOM05D002996 ORTHO05D003536 8.7e-07 56.6 41 65.9
Sabra17G0107000 Salix brachista HOM05D002996 ORTHO05D003536 8.7e-07 56.6 41 68.3
Sed0026936 Sechium edule HOM05D002996 ORTHO05D003536 8.7e-07 56.6 41 63.4
Solyc03g043660.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 8.7e-07 56.6 41 65.9
vmacro18050 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 8.7e-07 56.6 41 65.9
GSVIVG01030858001 Vitis vinifera HOM05D002996 ORTHO05D003536 8.7e-07 56.6 41 68.3
Medtr3g067695 Medicago truncatula HOM05D002996 ORTHO05D003536 1.1e-06 56.2 41 65.9
Prupe.3G159400 Prunus persica HOM05D002996 ORTHO05D003536 1.1e-06 56.2 41 65.9
TAR374G0579 Trochodendron aralioides HOM05D002996 ORTHO05D003536 1.1e-06 56.2 41 65.9
Ah.16g101290 Amaranthus hybridus HOM05D002996 ORTHO05D003536 1.5e-06 55.8 41 65.9
CANSAT78G2389 Cannabis sativa HOM05D002996 ORTHO05D003536 1.5e-06 55.8 41 65.9
Nn4g24147 Nelumbo nucifera HOM05D002996 ORTHO05D003536 1.5e-06 55.8 41 65.9
Phvul.001G231700 Phaseolus vulgaris HOM05D002996 ORTHO05D003536 1.5e-06 55.8 41 63.4
Ca_08163_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 1.9e-06 55.5 41 61.0
Ca_17109_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 1.9e-06 55.5 41 61.0
Glyma.11G218000 Glycine max HOM05D002996 ORTHO05D003536 1.9e-06 55.5 41 63.4
VMungo1383G2581 Vigna mungo HOM05D002996 ORTHO05D003536 1.9e-06 55.5 41 63.4
FAN18G1791 Fragaria x ananassa HOM05D002996 ORTHO05D003536 2.5e-06 55.1 41 61.0
Os02g0712000 Oryza sativa ssp. japonica HOM05D002996 ORTHO05D003536 2.5e-06 55.1 41 63.4
Potri.017G128300 Populus trichocarpa HOM05D002996 ORTHO05D003536 2.5e-06 55.1 41 65.9
RcHm_v2.0_Chr7g0220101 Rosa chinensis HOM05D002996 ORTHO05D003536 2.5e-06 55.1 41 61.0
TAR622G0566 Trochodendron aralioides HOM05D002996 ORTHO05D003536 2.5e-06 55.1 41 63.4
MSTRG.15319 Avicennia marina HOM05D002996 ORTHO05D003536 3.3e-06 54.7 41 63.4
EL10Ac2g04480 Beta vulgaris HOM05D002996 ORTHO05D003536 3.3e-06 54.7 41 63.4
ClCG05G010970 Citrullus lanatus HOM05D002996 ORTHO05D003536 3.3e-06 54.7 41 63.4
Lj2C435G10 Lonicera japonica HOM05D002996 ORTHO05D003536 3.3e-06 54.7 41 63.4
Sopen03g007520 Solanum pennellii HOM05D002996 ORTHO05D003536 3.3e-06 54.7 41 63.4
Zm00001eb252510 Zea mays HOM05D002996 ORTHO05D003536 3.3e-06 54.7 41 63.4
Atru.chr1.1814 Acer truncatum HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 63.4
FvH4_5g27890 Fragaria vesca HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 61.0
Glyma.18G039000 Glycine max HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 63.4
Lalb_Chr15g0084771 Lupinus albus HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 61.0
Medtr3g067690 Medicago truncatula HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 61.0
Nitab4.5_0000465g0030 Nicotiana tabacum HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 63.4
Nitab4.5_0002366g0050 Nicotiana tabacum HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 63.4
Potri.004G088600 Populus trichocarpa HOM05D002996 ORTHO05D003536 4.3e-06 54.3 41 63.4
Lsat_1_v5_gn_2_24061 Lactuca sativa HOM05D002996 ORTHO05D003536 5.6e-06 53.9 40 70.0
MELO3C020288.2 Cucumis melo HOM05D002996 ORTHO05D003536 7.4e-06 53.5 41 61.0
Rhsim10G0079400 Rhododendron simsii HOM05D002996 ORTHO05D003536 7.4e-06 53.5 41 61.0
Sabra04G0059000 Salix brachista HOM05D002996 ORTHO05D003536 7.4e-06 53.5 41 61.0
SalBow1G7030 Salvia bowleyana HOM05D002996 ORTHO05D003536 7.4e-06 53.5 41 61.0
Hund16206 Selenicereus undatus HOM05D002996 ORTHO05D003536 9.6e-06 53.1 41 61.0
Sc10g0000820 Simmondsia chinensis HOM05D002996 ORTHO05D003536 9.6e-06 53.1 41 58.5


User provided reference genes

Program Settings