Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0369701 Helianthus annuus HOM05D011992 ORTHO05D224349 0.0e+00 1305.4 663 100.0
HanXRQChr10g0307001 Helianthus annuus HOM05D011992 ORTHO05D223970 2.9e-261 905.2 471 97.0
HanXRQChr11g0352601 Helianthus annuus HOM05D011992 ORTHO05D000574 2.6e-31 141.4 284 35.9
HanXRQChr13g0392581 Helianthus annuus HOM05D011992 ORTHO05D000574 2.6e-31 141.4 284 35.9
HanXRQChr14g0436651 Helianthus annuus HOM05D011992 ORTHO05D221736 4.4e-31 140.6 346 32.9
HanXRQChr03g0062901 Helianthus annuus HOM05D011992 ORTHO05D008321 1.8e-24 118.6 189 37.6
ECA233G3388 Erigeron canadensis HOM05D011992 ORTHO05D015805 3.1e-24 117.9 144 46.5
ECA240G1021 Erigeron canadensis HOM05D011992 ORTHO05D015805 4.0e-24 117.5 132 48.5
ECA232G2791 Erigeron canadensis HOM05D011992 ORTHO05D008321 5.8e-23 113.6 176 38.6
ECA246G3386 Erigeron canadensis HOM05D011992 ORTHO05D015805 9.8e-23 112.8 141 44.7
ECA232G2820 Erigeron canadensis HOM05D011992 ORTHO05D015805 8.6e-19 99.8 161 39.1
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 6.2e-17 93.6 132 42.4
HanXRQChr17g0556681 Helianthus annuus HOM05D011992 ORTHO05D015805 1.9e-13 82.0 65 60.0
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 3.0e-11 74.7 111 41.4
Psat7g249320 Pisum sativum HOM05D001700 ORTHO05D002131 7.3e-10 70.1 186 33.9
Ah.02g122780 Amaranthus hybridus HOM05D001700 ORTHO05D002131 6.2e-09 67.0 194 34.0
HanXRQChr14g0446501 Helianthus annuus HOM05D001270 ORTHO05D224801 1.8e-08 65.5 192 31.8
HanXRQChr14g0445551 Helianthus annuus HOM05D001700 ORTHO05D002131 5.2e-08 63.9 62 61.3
Lsat_1_v5_gn_2_67780 Lactuca sativa HOM05D001700 ORTHO05D002131 1.2e-07 62.8 229 29.7
CiPaw.03G138200 Carya illinoinensis HOM05D001700 ORTHO05D002131 2.6e-07 61.6 250 27.2
FAN26G2523 Fragaria x ananassa HOM05D001700 ORTHO05D002131 9.9e-07 59.7 228 28.9
AUR62002040 Chenopodium quinoa HOM05D001700 ORTHO05D002131 1.7e-06 58.9 62 56.5
AUR62003757 Chenopodium quinoa HOM05D001700 ORTHO05D002131 1.7e-06 58.9 62 56.5
FAN28G2305 Fragaria x ananassa HOM05D001700 ORTHO05D002131 1.7e-06 58.9 228 28.5
Potri.007G087200 Populus trichocarpa HOM05D001700 ORTHO05D002131 1.7e-06 58.9 250 27.6
Sabra05G0065700 Salix brachista HOM05D001700 ORTHO05D002131 1.7e-06 58.9 123 35.8
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 2.2e-06 58.5 236 28.8
Sc16g0003080 Simmondsia chinensis HOM05D001700 ORTHO05D002131 2.2e-06 58.5 62 56.5
Actinidia36608 Actinidia chinensis HOM05D001700 ORTHO05D002131 2.9e-06 58.2 193 29.5
MD01G1024000 Malus domestica HOM05D001700 ORTHO05D002131 2.9e-06 58.2 191 30.4
Ah.02g122870 Amaranthus hybridus HOM05D001700 ORTHO05D002131 3.7e-06 57.8 119 40.3
arahy.Tifrunner.gnm1.ann1.01D2LU Arachis hypogaea HOM05D001700 ORTHO05D002131 3.7e-06 57.8 77 48.1
arahy.Tifrunner.gnm1.ann1.URDF0Y Arachis hypogaea HOM05D001700 ORTHO05D002131 3.7e-06 57.8 77 48.1
CSS0035982 Camellia sinensis var. sinensis HOM05D001700 ORTHO05D002131 3.7e-06 57.8 192 29.7
RcHm_v2.0_Chr2g0115531 Rosa chinensis HOM05D001700 ORTHO05D002131 3.7e-06 57.8 228 28.5
vmacro12935 Vaccinium macrocarpon HOM05D001700 ORTHO05D002131 3.7e-06 57.8 192 30.2
arahy.Tifrunner.gnm1.ann1.1QLE3S Arachis hypogaea HOM05D001700 ORTHO05D002131 4.9e-06 57.4 62 53.2
arahy.Tifrunner.gnm1.ann1.E7E9RS Arachis hypogaea HOM05D001700 ORTHO05D002131 4.9e-06 57.4 62 53.2
FvH4_1g21660 Fragaria vesca HOM05D001700 ORTHO05D002131 6.4e-06 57.0 228 28.1
FAN19G0237 Fragaria x ananassa HOM05D001700 ORTHO05D002131 6.4e-06 57.0 228 28.1
FAN23G1158 Fragaria x ananassa HOM05D001700 ORTHO05D002131 6.4e-06 57.0 228 28.1
Potri.005G080100 Populus trichocarpa HOM05D001700 ORTHO05D002131 6.4e-06 57.0 123 35.8
Hund16265 Selenicereus undatus HOM05D001700 ORTHO05D002131 6.4e-06 57.0 119 40.3
GSVIVG01022187001 Vitis vinifera HOM05D001700 ORTHO05D002131 6.4e-06 57.0 62 56.5
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 8.3e-06 56.6 103 40.8
Gohir.A12G091200 Gossypium hirsutum HOM05D001700 ORTHO05D002131 8.3e-06 56.6 61 54.1
Gohir.D12G094700 Gossypium hirsutum HOM05D001700 ORTHO05D002131 8.3e-06 56.6 61 54.1
Gorai.008G103300 Gossypium raimondii HOM05D001700 ORTHO05D002131 8.3e-06 56.6 61 54.1
Lj6g0012862 Lotus japonicus HOM05D001700 ORTHO05D002131 8.3e-06 56.6 62 54.8
MD15G1329300 Malus domestica HOM05D001700 ORTHO05D002131 8.3e-06 56.6 192 29.7
Prupe.6G179000 Prunus persica HOM05D001700 ORTHO05D002131 8.3e-06 56.6 192 29.7
Thecc.01G107700 Theobroma cacao HOM05D001700 ORTHO05D002131 8.3e-06 56.6 62 54.8


User provided reference genes

Program Settings