Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 1.7e-188 662.5 345 100.0
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 9.1e-105 384.4 343 65.3
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 3.0e-92 342.8 362 55.8
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 9.8e-83 311.2 377 50.9
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 2.7e-80 303.1 376 50.3
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 5.0e-79 298.9 378 48.4
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 5.6e-78 295.4 375 48.3
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 4.7e-77 292.4 373 48.3
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 8.0e-77 291.6 373 49.1
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.0e-76 291.2 382 47.1
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 6.8e-76 288.5 374 47.9
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 1.2e-75 287.7 381 46.5
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 1.5e-75 287.3 338 50.3
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.6e-75 286.6 372 48.7
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 3.4e-75 286.2 372 48.4
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.4e-73 280.0 368 47.6
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 2.4e-73 280.0 386 47.4
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 4.1e-73 279.3 377 46.7
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 9.2e-73 278.1 374 47.9
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 1.2e-72 277.7 380 46.3
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.0e-72 276.9 365 45.2
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 7.8e-72 275.0 331 49.2
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 7.8e-72 275.0 367 45.0
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 1.0e-71 274.6 354 48.0
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 6.6e-71 271.9 355 45.9
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.9e-70 270.4 347 47.0
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 3.3e-70 269.6 367 47.4
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 4.3e-70 269.2 376 46.3
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 4.3e-70 269.2 376 45.5
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 7.3e-70 268.5 366 47.5
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 6.2e-69 265.4 344 46.8
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 1.1e-68 264.6 377 46.7
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.3e-68 263.5 376 45.2
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 3.1e-68 263.1 357 45.9
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 3.1e-68 263.1 382 44.5
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.1e-68 263.1 336 46.4
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 6.8e-68 261.9 337 47.8
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 8.9e-68 261.5 337 48.1
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.2e-67 261.2 382 43.5
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 1.2e-67 261.2 336 46.7
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.2e-67 261.2 397 43.6
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.5e-67 260.8 378 41.5
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 5.8e-67 258.8 340 46.8
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.9e-66 256.5 337 47.2
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 4.9e-66 255.8 395 43.0
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 8.3e-66 255.0 388 43.6
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 1.1e-65 254.6 376 42.8
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 2.4e-65 253.4 383 43.3
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.2e-65 253.1 392 42.3
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 9.2e-65 251.5 393 42.0
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.6e-64 250.8 335 47.2
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.7e-64 250.0 380 42.9
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 4.6e-64 249.2 364 45.6
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.0e-63 248.1 344 45.1
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.1e-62 244.6 422 40.3
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.5e-62 244.2 342 46.2
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 1.5e-62 244.2 369 43.1
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 1.5e-62 244.2 369 43.1
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.5e-62 244.2 340 44.7
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.9e-62 243.8 334 45.5
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 5.6e-62 242.3 344 45.6
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 7.3e-62 241.9 368 44.8
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 2.8e-61 240.0 312 46.5
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.6e-61 239.6 340 45.0
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 4.7e-61 239.2 367 43.6
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 8.1e-61 238.4 435 40.2
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.1e-60 238.0 340 43.8
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 1.4e-60 237.7 335 43.3
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 8.9e-60 235.0 376 43.1
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 8.9e-60 235.0 164 72.0
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.2e-59 234.6 395 42.5
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 2.0e-59 233.8 365 43.8
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 9.9e-59 231.5 364 43.1
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 2.9e-58 229.9 352 42.3
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.4e-57 227.6 275 47.6
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 3.2e-57 226.5 367 40.9
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 7.1e-57 225.3 351 43.3
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.2e-56 224.6 438 39.0
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.6e-56 224.2 311 45.7
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 3.5e-56 223.0 301 46.5
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 6.0e-56 222.2 396 39.1
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.3e-55 221.1 417 42.4
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 5.1e-55 219.2 352 40.6
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 2.5e-54 216.9 332 43.1
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 9.5e-54 214.9 310 44.2
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 1.2e-53 214.5 353 41.6
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.2e-53 214.5 364 40.4
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 2.8e-53 213.4 298 46.3
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 6.2e-53 212.2 352 42.6
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 3.1e-52 209.9 361 40.2
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 3.1e-52 209.9 361 40.2
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 2.6e-51 206.8 316 40.8
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.7e-50 204.1 367 38.1
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 2.9e-50 203.4 372 38.2
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 8.4e-50 201.8 349 38.7
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 1.9e-49 200.7 368 39.1
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 3.2e-49 199.9 300 43.0
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 1.6e-45 187.6 266 45.1
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 4.0e-44 183.0 254 44.1
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 4.0e-44 183.0 254 44.1
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 4.0e-44 183.0 254 44.1
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 5.2e-44 182.6 290 42.1
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 5.2e-44 182.6 294 42.9
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 1.5e-43 181.0 373 36.7
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 3.8e-42 176.4 367 36.2
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 2.4e-41 173.7 341 34.9
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 5.4e-41 172.6 254 41.7
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 5.4e-41 172.6 254 41.7
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 1.6e-40 171.0 259 43.6
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 6.6e-39 165.6 311 40.2
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 8.7e-39 165.2 312 39.1
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 2.8e-37 160.2 290 39.3
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 1.5e-35 154.5 256 41.8
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 2.1e-32 144.1 415 32.8
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.2e-27 128.3 382 31.7
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 5.5e-17 92.8 147 41.5
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 9.3e-17 92.0 282 31.2
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 3.9e-15 86.7 59 69.5
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 8.7e-15 85.5 100 49.0
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.5e-14 84.0 288 26.7
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 5.3e-12 76.3 352 25.6
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.1e-09 68.6 86 45.3
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 4.6e-08 63.2 44 63.6
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.4e-07 61.6 314 26.8
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 1.9e-06 57.8 241 27.8


User provided reference genes

Program Settings