Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0368271 Helianthus annuus HOM05D021830 ORTHO05D008409 2.8e-20 101.7 57 100.0
Lsat_1_v5_gn_8_24340 Lactuca sativa HOM05D021830 ORTHO05D025293 4.3e-13 77.8 55 76.4
ECA233G1498 Erigeron canadensis HOM05D021830 ORTHO05D025293 4.9e-09 64.3 55 70.9
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 6.0e-07 57.4 57 64.9
Lsat_1_v5_gn_2_104161 Lactuca sativa HOM05D021830 ORTHO05D025293 1.0e-06 56.6 58 60.3
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 1.0e-06 56.6 57 57.9
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 1.7e-06 55.8 57 57.9
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 2.3e-06 55.5 57 63.2
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 3.0e-06 55.1 57 63.2
arahy.Tifrunner.gnm1.ann1.DEP6R1 Arachis hypogaea HOM05D007506 ORTHO05D008409 3.9e-06 54.7 57 57.9
arahy.Tifrunner.gnm1.ann1.MBF964 Arachis hypogaea HOM05D007506 ORTHO05D008409 3.9e-06 54.7 57 57.9
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 3.9e-06 54.7 57 63.2
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 3.9e-06 54.7 57 57.9
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 3.9e-06 54.7 58 58.6
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 5.1e-06 54.3 57 57.9
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 5.1e-06 54.3 57 56.1
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 5.1e-06 54.3 56 58.9
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 5.1e-06 54.3 61 59.0
Psat6g238400 Pisum sativum HOM05D007506 ORTHO05D008409 6.6e-06 53.9 57 54.4
Oeu027974.1 Olea europaea HOM05D007506 ORTHO05D008409 8.6e-06 53.5 57 57.9
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 8.6e-06 53.5 57 61.4


User provided reference genes

Program Settings