Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 4.0e-139 498.0 242 100.0
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 4.3e-53 212.2 232 53.0
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 3.1e-51 206.1 214 54.7
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.7e-44 183.7 245 42.9
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 3.7e-44 182.6 245 42.9
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.5e-42 177.2 241 42.7
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 2.0e-42 176.8 241 42.7
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 3.4e-42 176.0 241 42.7
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 5.9e-42 175.3 239 41.8
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.3e-41 174.1 226 43.4
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 1.7e-41 173.7 232 40.1
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 2.9e-41 172.9 243 40.3
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 3.8e-41 172.6 205 44.9
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 6.5e-41 171.8 243 41.6
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.1e-40 171.0 205 45.4
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 1.9e-40 170.2 222 42.3
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.5e-40 169.9 244 39.8
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 3.2e-40 169.5 243 39.5
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 4.2e-40 169.1 244 38.5
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 4.2e-40 169.1 240 39.6
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 4.2e-40 169.1 243 40.7
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 5.5e-40 168.7 243 40.7
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 5.5e-40 168.7 244 38.1
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 5.5e-40 168.7 239 40.2
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 7.2e-40 168.3 243 40.3
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 9.4e-40 167.9 243 40.3
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 9.4e-40 167.9 239 40.2
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.2e-39 167.5 244 38.9
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 1.6e-39 167.2 240 40.4
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 2.1e-39 166.8 239 39.7
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 2.7e-39 166.4 238 38.2
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 2.7e-39 166.4 240 40.0
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 4.7e-39 165.6 216 42.1
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 6.1e-39 165.2 204 43.1
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 6.1e-39 165.2 244 38.9
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 7.9e-39 164.9 220 41.8
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.0e-38 164.5 240 39.6
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 1.4e-38 164.1 240 40.0
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 2.3e-38 163.3 242 39.7
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.3e-38 163.3 237 38.8
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 3.9e-38 162.5 216 40.7
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 5.1e-38 162.2 222 41.4
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 5.1e-38 162.2 235 37.9
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 6.7e-38 161.8 237 38.4
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 6.7e-38 161.8 216 39.8
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 8.8e-38 161.4 242 37.2
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 1.1e-37 161.0 230 36.5
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 1.5e-37 160.6 209 42.6
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 1.5e-37 160.6 209 42.6
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 2.6e-37 159.8 238 37.4
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 2.6e-37 159.8 210 41.9
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.3e-37 159.5 237 38.0
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 3.3e-37 159.5 210 41.4
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 4.4e-37 159.1 237 37.6
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 5.7e-37 158.7 237 38.8
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.7e-37 158.7 212 40.6
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 5.7e-37 158.7 208 41.3
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 9.7e-37 157.9 236 37.3
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 9.7e-37 157.9 236 37.3
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 9.7e-37 157.9 236 38.6
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 9.7e-37 157.9 232 38.4
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 9.7e-37 157.9 210 41.4
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 1.3e-36 157.5 233 37.8
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 1.3e-36 157.5 236 38.1
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.3e-36 157.5 215 40.0
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 2.8e-36 156.4 240 38.8
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.8e-36 156.4 250 36.0
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 2.8e-36 156.4 205 42.4
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 2.8e-36 156.4 249 36.9
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 3.7e-36 156.0 235 37.9
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 3.7e-36 156.0 221 38.5
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 8.2e-36 154.8 238 36.6
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.4e-35 154.1 238 36.6
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 1.8e-35 153.7 237 37.6
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 2.4e-35 153.3 239 36.0
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 3.1e-35 152.9 215 40.9
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 3.1e-35 152.9 242 37.6
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 4.1e-35 152.5 241 36.1
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 7.0e-35 151.8 242 36.0
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 7.0e-35 151.8 185 47.0
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 7.0e-35 151.8 237 37.6
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 1.2e-34 151.0 241 36.5
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 1.6e-34 150.6 240 37.9
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.7e-33 147.1 241 35.7
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 2.9e-33 146.4 240 34.2
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 5.0e-33 145.6 240 34.6
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 5.0e-33 145.6 235 36.2
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 6.5e-33 145.2 240 35.4
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 5.5e-32 142.1 193 45.6
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.6e-31 140.6 245 35.5
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 3.6e-31 139.4 209 36.4
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 2.3e-30 136.7 196 39.3
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 2.0e-29 133.7 243 33.7
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 5.7e-29 132.1 208 38.5
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 1.1e-27 127.9 166 38.6
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 9.1e-27 124.8 246 33.7
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 2.2e-25 120.2 246 30.1
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.2e-25 120.2 147 46.3
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.9e-24 117.1 166 40.4
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.9e-24 117.1 243 31.7
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 1.6e-23 114.0 130 48.5
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 6.1e-23 112.1 204 35.3
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 6.1e-23 112.1 82 73.2
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 1.0e-22 111.3 151 42.4
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 1.8e-22 110.5 147 43.5
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.3e-22 110.2 167 36.5
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 7.5e-21 105.1 137 43.8
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.1e-16 91.3 149 32.2
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 5.5e-16 89.0 117 38.5
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.4e-14 84.3 107 38.3
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 3.4e-13 79.7 210 27.6
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.4e-13 79.3 85 42.4
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 2.8e-12 76.6 216 27.3
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.7e-10 70.1 85 36.5
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.7e-10 68.6 86 46.5
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 2.8e-07 60.1 69 39.1
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 4.7e-07 59.3 69 47.8
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 4.0e-06 56.2 85 32.9


User provided reference genes

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