Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 9.1e-122 440.3 224 100.0
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 4.8e-107 391.3 228 89.9
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 2.6e-100 369.0 227 83.3
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.9e-95 352.8 220 80.0
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.9e-95 352.8 243 74.5
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 9.4e-95 350.5 224 77.7
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 6.1e-94 347.8 224 77.7
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 1.0e-93 347.1 218 79.4
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 1.0e-93 347.1 224 78.1
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 2.3e-93 345.9 224 77.7
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 5.2e-93 344.7 224 77.2
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 5.2e-93 344.7 224 78.1
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 6.8e-93 344.4 221 77.8
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 6.8e-93 344.4 224 76.8
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 8.8e-93 344.0 223 75.8
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.2e-92 343.6 222 77.5
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 2.0e-92 342.8 224 76.3
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 2.0e-92 342.8 222 77.5
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.7e-92 341.3 224 76.8
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 5.7e-92 341.3 224 76.8
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 7.5e-92 340.9 224 76.8
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 7.5e-92 340.9 224 75.9
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 7.5e-92 340.9 221 76.9
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 7.5e-92 340.9 220 76.8
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 9.8e-92 340.5 224 75.9
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.3e-91 340.1 224 75.0
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.7e-91 339.7 230 75.2
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.2e-91 339.3 224 76.3
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 2.2e-91 339.3 214 78.5
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 3.7e-91 338.6 207 81.6
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 4.9e-91 338.2 224 75.9
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 6.3e-91 337.8 224 76.8
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.1e-90 337.0 214 78.5
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.4e-90 336.7 222 76.6
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 1.4e-90 336.7 221 77.8
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.4e-90 336.7 224 76.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 4.1e-90 335.1 212 79.2
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 9.2e-90 334.0 224 76.8
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 1.2e-89 333.6 215 76.7
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.6e-89 333.2 224 73.2
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 2.0e-89 332.8 221 76.9
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 3.5e-89 332.0 221 75.6
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 7.7e-89 330.9 220 75.0
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 7.7e-89 330.9 218 76.6
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 7.7e-89 330.9 224 72.3
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 1.7e-88 329.7 223 76.2
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.3e-88 329.3 221 74.7
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 6.6e-88 327.8 219 74.9
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 3.3e-87 325.5 224 71.0
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 5.6e-87 324.7 220 72.7
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 9.5e-87 323.9 218 74.3
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.6e-86 323.2 220 72.3
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 1.6e-86 323.2 224 74.1
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.8e-86 322.4 219 73.5
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 3.6e-86 322.0 224 74.1
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 4.7e-86 321.6 220 73.2
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 4.7e-86 321.6 216 74.1
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 6.1e-86 321.2 224 73.2
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 6.1e-86 321.2 222 71.6
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 6.1e-86 321.2 222 74.8
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 8.0e-86 320.9 219 72.6
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.4e-85 320.1 220 71.8
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.4e-84 315.5 245 67.3
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 7.5e-84 314.3 199 80.4
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 2.2e-83 312.8 222 73.0
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 2.4e-82 309.3 224 69.2
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 2.4e-82 309.3 224 69.2
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 5.4e-82 308.1 217 70.0
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 7.0e-82 307.8 224 68.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 3.0e-80 302.4 224 70.1
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 3.9e-80 302.0 221 70.6
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 8.6e-80 300.8 218 68.8
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 1.5e-79 300.1 193 75.6
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.3e-79 298.5 221 68.8
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 4.3e-79 298.5 217 69.1
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 4.3e-79 298.5 224 67.4
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 4.3e-79 298.5 260 63.1
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 9.5e-79 297.4 222 69.4
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 6.2e-78 294.7 195 74.9
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 4.0e-77 292.0 215 68.8
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 4.0e-77 292.0 246 63.4
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 1.5e-76 290.0 215 68.8
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.6e-76 289.3 217 67.7
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 2.6e-76 289.3 207 72.5
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 4.4e-76 288.5 260 61.2
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.3e-75 287.0 225 68.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 1.3e-75 287.0 248 63.3
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 3.2e-74 282.3 217 66.4
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 7.0e-74 281.2 220 67.7
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.5e-73 278.9 228 68.0
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.5e-73 278.9 211 68.2
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 8.6e-72 274.2 178 74.2
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.3e-71 271.9 207 66.7
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 2.1e-70 269.6 221 64.7
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 3.3e-63 245.7 219 60.3
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 6.2e-62 241.5 273 53.5
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 4.0e-61 238.8 208 63.0
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 4.9e-59 231.9 154 74.0
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 8.4e-59 231.1 160 71.9
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 7.8e-57 224.6 153 73.2
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 1.3e-56 223.8 221 53.8
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 3.0e-56 222.6 195 63.6
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 4.9e-51 205.3 227 52.0
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 4.2e-50 202.2 313 42.5
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 6.6e-48 194.9 143 66.4
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.3e-46 190.7 221 49.3
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 6.2e-46 188.3 201 57.2
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 3.8e-43 179.1 220 46.4
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 3.0e-40 169.5 146 54.8
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.9e-35 152.9 108 70.4
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 5.5e-34 148.7 85 83.5
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 3.5e-33 146.0 386 31.6
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.0e-28 130.2 97 61.9
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 5.7e-23 112.1 70 71.4
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.9e-20 102.1 143 44.8
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 2.2e-19 100.1 51 92.2
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 1.4e-18 97.4 116 52.6
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 7.2e-18 95.1 66 80.3
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 3.6e-17 92.8 53 84.9
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 3.6e-17 92.8 67 67.2
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 6.1e-17 92.0 67 71.6
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.3e-14 84.3 198 32.8
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 6.9e-13 78.6 53 75.5
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 3.4e-12 76.3 52 75.0
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.4e-10 70.9 102 40.2
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.5e-07 60.8 45 68.9
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.6e-07 60.1 57 57.9


User provided reference genes

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