Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 0.0e+00 1316.6 767 100.0
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 2.8e-247 859.0 711 75.4
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 2.1e-234 816.2 774 69.5
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.4e-150 537.7 780 52.4
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 9.9e-144 515.0 789 52.5
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.1e-142 511.5 749 52.3
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.5e-139 501.1 784 49.1
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 5.3e-137 492.7 730 51.0
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 4.5e-136 489.6 729 49.7
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 2.9e-135 486.9 740 50.8
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 2.9e-135 486.9 730 50.3
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 3.5e-133 479.9 733 49.9
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.1e-130 470.7 798 48.7
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 8.2e-130 468.8 711 51.1
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 2.6e-128 463.8 744 50.3
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.3e-127 461.5 729 50.8
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 1.7e-127 461.1 711 50.5
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 2.9e-127 460.3 738 49.1
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.9e-127 459.5 762 47.9
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 2.7e-125 453.8 866 46.5
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 5.1e-124 449.5 779 47.2
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.1e-121 440.3 761 46.9
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.9e-120 436.0 761 48.0
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 1.9e-118 431.0 784 46.6
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.9e-118 431.0 888 43.6
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 2.5e-118 430.6 678 50.6
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 3.2e-118 430.3 728 47.7
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 1.2e-117 428.3 760 47.8
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 2.1e-117 427.6 744 45.8
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 4.6e-117 426.4 786 45.9
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.9e-115 421.0 841 34.7
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 4.3e-115 419.9 774 46.4
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 7.4e-115 419.1 696 49.6
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.6e-114 417.9 761 46.1
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.2e-111 407.5 704 47.9
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 3.8e-111 406.8 691 50.8
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 6.5e-111 406.0 788 46.7
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 4.2e-110 403.3 728 47.3
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 4.2e-110 403.3 746 47.1
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 7.2e-110 402.5 706 46.7
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 9.4e-110 402.1 732 47.4
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 3.6e-109 400.2 631 51.7
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 3.6e-109 400.2 765 46.8
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 6.1e-109 399.4 660 53.0
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.4e-108 398.3 700 46.6
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 1.4e-108 398.3 697 47.8
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 3.0e-108 397.1 645 43.6
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 6.7e-108 396.0 690 47.2
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 7.4e-107 392.5 685 47.6
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.3e-106 391.7 722 46.5
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.7e-106 391.3 685 47.6
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.7e-106 391.3 659 39.9
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 4.8e-106 389.8 761 46.0
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 8.2e-106 389.0 712 47.2
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 8.2e-106 389.0 690 47.0
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 9.1e-105 385.6 733 46.4
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 4.5e-104 383.3 685 46.3
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 5.9e-104 382.9 695 45.5
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.3e-103 381.7 765 44.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.7e-103 381.3 828 43.4
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.7e-103 381.3 679 47.3
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.7e-103 381.3 687 38.0
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 2.9e-103 380.6 765 44.4
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 3.8e-103 380.2 715 45.7
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 1.1e-102 378.6 691 45.2
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.1e-101 374.4 813 43.4
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 6.1e-101 372.9 763 43.5
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 7.9e-101 372.5 663 47.7
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 7.9e-101 372.5 637 48.8
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.4e-100 371.7 661 39.3
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 8.8e-100 369.0 632 47.8
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 1.5e-99 368.2 770 42.7
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 1.4e-97 361.7 698 44.4
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.6e-96 358.2 612 36.8
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.5e-94 351.7 647 47.8
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 5.7e-91 339.7 703 44.8
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 3.7e-90 337.0 616 46.3
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 5.9e-88 329.7 548 51.3
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 3.5e-80 303.9 640 44.8
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.9e-78 298.1 579 49.2
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 9.5e-78 295.8 579 47.5
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 8.0e-77 292.7 479 38.8
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 4.0e-76 290.4 593 34.9
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 2.4e-73 281.2 682 41.8
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 2.3e-71 274.6 536 48.1
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.6e-69 268.5 468 37.8
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.5e-67 261.9 567 43.4
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.7e-64 251.1 718 36.2
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 6.6e-63 246.5 696 32.8
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.4e-57 228.0 243 50.2
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 9.5e-54 216.1 454 49.6
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 1.7e-47 195.3 277 45.8
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 2.5e-46 191.4 339 37.2
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 5.6e-46 190.3 442 33.9
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 2.1e-45 188.3 440 31.4
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.2e-41 174.5 176 54.0
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 6.9e-36 156.8 413 48.2
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 6.0e-32 143.7 435 43.2
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 3.4e-27 127.9 661 25.4
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 8.7e-23 113.2 220 40.9
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 2.7e-16 91.7 312 31.1
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.5e-14 85.9 59 67.8
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.3e-14 84.7 229 31.9
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 4.3e-14 84.3 47 76.6
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 4.3e-14 84.3 95 53.7
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 2.1e-13 82.0 249 30.5
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 2.6e-11 75.1 114 44.7
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 4.5e-11 74.3 108 42.6
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 4.5e-11 74.3 81 44.4
HanXRQChr04g0127681 Helianthus annuus HOM05D006757 ORTHO05D004651 2.5e-09 68.6 41 92.7
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 1.8e-07 62.4 281 26.0
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 4.3e-06 57.8 193 30.6
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 4.3e-06 57.8 164 29.9


User provided reference genes

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