Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 4.0e-240 834.3 413 100.0
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.5e-181 639.0 411 76.4
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 4.2e-165 585.1 416 69.7
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 8.5e-150 534.3 401 66.8
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 4.5e-143 511.9 399 64.2
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.5e-141 506.1 384 63.8
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 7.2e-141 504.6 390 61.8
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.2e-140 503.8 392 61.7
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.6e-140 503.4 411 61.1
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.8e-139 500.0 394 60.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.3e-139 499.6 413 61.0
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 3.0e-139 499.2 413 57.4
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 5.2e-139 498.4 415 60.2
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 5.7e-138 495.0 383 61.4
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 2.2e-137 493.0 403 61.3
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 3.7e-137 492.3 389 61.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 4.8e-137 491.9 383 61.1
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 6.3e-137 491.5 412 60.4
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.1e-136 490.7 407 59.5
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 3.1e-136 489.2 387 61.8
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 9.1e-136 487.6 392 61.2
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.2e-135 487.3 383 60.6
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.6e-135 486.9 391 59.1
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.6e-135 486.9 414 59.4
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 4.5e-135 485.3 381 62.2
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.0e-134 484.2 391 59.1
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.0e-134 484.2 414 58.9
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 1.0e-134 484.2 408 58.6
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.7e-134 483.4 391 60.6
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 3.2e-133 479.2 397 58.7
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.6e-132 476.9 398 59.5
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.1e-132 476.5 404 57.9
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.6e-132 475.7 434 56.7
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 4.7e-132 475.3 382 60.5
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 4.7e-132 475.3 409 57.7
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 4.7e-132 475.3 409 57.9
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 6.1e-132 474.9 391 60.1
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 8.0e-132 474.6 396 59.6
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.0e-131 474.2 408 57.8
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 1.4e-131 473.8 386 58.8
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.4e-131 473.8 408 57.1
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.8e-131 473.4 398 57.8
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 3.0e-131 472.6 398 58.0
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 5.2e-131 471.9 380 59.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.2e-130 470.7 396 59.6
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.6e-130 469.5 398 58.5
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 3.4e-130 469.2 392 57.7
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 3.4e-130 469.2 386 58.5
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 9.8e-130 467.6 390 59.0
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.7e-129 466.8 391 58.6
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.7e-129 466.8 396 56.8
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 3.5e-127 459.1 382 59.9
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 5.6e-125 451.8 412 56.1
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 3.6e-124 449.1 413 54.7
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 3.6e-124 449.1 408 56.4
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 3.6e-124 449.1 393 56.2
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 6.1e-124 448.4 405 56.0
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.4e-123 447.2 406 56.2
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 5.2e-123 445.3 380 58.2
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 5.7e-122 441.8 412 54.9
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 7.5e-122 441.4 397 55.9
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 2.2e-121 439.9 391 56.0
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.4e-120 437.2 381 58.0
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 1.4e-120 437.2 384 56.5
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 4.6e-119 432.2 445 51.7
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 5.9e-119 431.8 390 55.4
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 2.5e-117 426.4 381 54.9
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 4.7e-116 422.2 344 58.4
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 8.0e-116 421.4 410 53.9
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.4e-115 420.6 391 54.7
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.4e-115 420.6 414 53.6
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.4e-115 420.6 414 53.6
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 4.4e-114 415.6 452 49.1
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 9.8e-114 414.5 388 56.7
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.1e-112 411.0 381 52.8
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.4e-112 408.7 385 52.2
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 7.0e-112 408.3 409 52.8
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 6.0e-111 405.2 447 49.2
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.2e-107 392.1 400 52.5
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.2e-107 392.1 385 53.0
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.5e-106 390.6 296 61.8
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.9e-102 375.9 295 59.3
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 3.3e-101 372.9 286 60.5
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 4.3e-101 372.5 290 60.7
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 4.7e-100 369.0 295 59.3
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 6.8e-99 365.2 295 58.0
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 7.3e-85 318.5 270 60.0
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.3e-84 317.8 296 50.3
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.1e-79 300.4 236 59.7
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.7e-73 280.8 395 41.3
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 8.7e-70 268.5 293 50.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.5e-69 266.9 230 55.7
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 1.3e-68 264.6 268 49.6
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.0e-66 257.3 240 55.0
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 3.2e-64 250.0 213 56.3
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 4.3e-61 239.6 399 35.8
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.2e-55 221.5 201 53.7
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 7.7e-50 202.2 156 62.8
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 4.8e-44 183.0 184 52.7
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 6.3e-36 156.0 148 52.7
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.1e-35 155.2 141 52.5
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 5.3e-35 152.9 389 29.3
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 2.6e-29 134.0 135 47.4
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.0e-26 124.4 83 69.9
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 3.8e-25 120.2 84 64.3
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.6e-21 107.5 411 25.3
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 2.4e-19 100.9 86 54.7
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.0e-17 93.2 87 48.3
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 8.0e-15 85.9 67 65.7
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 8.0e-15 85.9 398 24.4
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 4.0e-14 83.6 427 25.8
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.5e-13 81.6 84 47.6
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.5e-13 81.6 412 24.5
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 2.0e-13 81.3 68 52.9
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 4.1e-11 73.6 109 34.9
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 4.5e-10 70.1 64 45.3
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 2.9e-09 67.4 47 66.0
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 5.2e-06 56.6 61 52.5


User provided reference genes

Program Settings