Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 3.0e-179 631.7 318 100.0
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 1.9e-101 373.2 331 63.4
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 1.9e-101 373.2 331 63.4
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 3.7e-92 342.4 329 59.6
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 8.7e-86 321.2 344 58.1
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 4.0e-83 312.4 331 58.9
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 1.1e-80 304.3 333 56.5
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 1.1e-80 304.3 333 56.5
ECA233G1390 Erigeron canadensis HOM05D004568 ORTHO05D005343 2.7e-63 246.5 255 62.0
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 1.7e-57 227.3 396 43.2
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 1.1e-56 224.6 333 47.7
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 3.3e-53 213.0 365 44.9
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 1.7e-52 210.7 398 41.0
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 2.2e-52 210.3 367 44.1
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 2.2e-52 210.3 371 44.5
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 7.0e-51 205.3 411 38.9
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 1.6e-50 204.1 371 43.4
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 6.5e-49 198.7 394 40.1
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 1.5e-48 197.6 347 45.5
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 1.9e-48 197.2 347 44.4
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 1.6e-47 194.1 419 37.7
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 1.6e-47 194.1 402 38.3
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 2.1e-47 193.7 337 43.3
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 1.0e-46 191.4 364 41.5
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 8.8e-46 188.3 349 43.6
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 1.5e-45 187.6 336 39.6
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 2.6e-45 186.8 384 39.3
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 1.7e-44 184.1 388 39.2
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 1.7e-44 184.1 375 38.1
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 2.2e-44 183.7 394 38.8
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 2.8e-44 183.3 378 38.9
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 3.7e-44 183.0 355 43.4
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 4.8e-44 182.6 401 39.9
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 4.8e-44 182.6 401 39.9
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 4.8e-44 182.6 372 39.8
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 3.1e-43 179.9 401 38.2
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 4.1e-43 179.5 397 38.5
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 7.0e-43 178.7 364 41.5
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 5.9e-42 175.6 401 38.4
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 1.7e-41 174.1 368 38.9
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 2.2e-41 173.7 395 37.5
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 2.9e-41 173.3 370 38.9
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 3.8e-41 172.9 361 39.6
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 5.0e-41 172.6 324 41.4
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.1e-40 171.4 396 36.4
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 1.9e-40 170.6 385 37.1
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.9e-40 170.6 396 36.4
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 4.2e-40 169.5 359 40.7
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 4.2e-40 169.5 421 37.1
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 5.5e-40 169.1 416 36.1
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 9.4e-40 168.3 388 36.1
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 4.7e-39 166.0 269 46.8
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 1.4e-38 164.5 406 36.5
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 6.8e-38 162.2 384 35.7
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 1.5e-37 161.0 381 36.2
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 3.4e-37 159.8 326 39.9
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 4.4e-37 159.5 402 35.6
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 5.7e-37 159.1 415 34.5
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 9.8e-37 158.3 389 35.5
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 9.8e-37 158.3 410 35.4
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.7e-36 157.5 393 35.1
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 3.7e-36 156.4 410 34.9
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 3.7e-36 156.4 334 38.3
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 3.7e-36 156.4 334 38.3
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 8.3e-36 155.2 413 33.9
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 1.1e-35 154.8 409 34.0
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 1.4e-35 154.5 318 37.1
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.4e-35 154.5 384 35.7
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 1.4e-35 154.5 384 35.7
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.8e-35 154.1 352 35.8
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 2.4e-35 153.7 399 34.6
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 3.1e-35 153.3 340 38.8
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 4.1e-35 152.9 390 34.6
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 1.6e-34 151.0 343 37.3
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.7e-34 150.2 352 34.9
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.7e-34 150.2 352 34.9
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 2.7e-34 150.2 352 34.9
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 1.7e-33 147.5 387 34.1
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 2.3e-33 147.1 399 34.1
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 2.9e-33 146.7 410 33.2
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 8.6e-33 145.2 323 37.2
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 1.1e-32 144.8 361 34.9
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 1.9e-32 144.1 372 34.1
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 3.3e-32 143.3 376 33.5
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 7.2e-32 142.1 337 35.9
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 2.1e-31 140.6 358 39.7
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 2.1e-31 140.6 323 36.5
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 2.8e-31 140.2 359 39.6
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 3.6e-31 139.8 331 38.1
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 1.0e-30 138.3 359 34.3
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.8e-30 137.5 340 35.9
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 2.3e-30 137.1 390 32.3
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 2.3e-30 137.1 400 34.5
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 5.2e-30 136.0 413 33.7
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 6.8e-30 135.6 254 39.4
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 6.8e-30 135.6 339 35.4
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 8.9e-30 135.2 376 37.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 5.7e-29 132.5 284 40.5
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.3e-28 131.3 342 35.7
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 1.3e-28 131.3 320 34.7
CDE04G2972 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 1.1e-27 128.3 269 37.9
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.1e-27 128.3 385 33.5
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 4.1e-27 126.3 340 37.9
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 1.2e-26 124.8 373 30.8
Haze_11819 Corylus avellana HOM05D004568 ORTHO05D005343 4.5e-26 122.9 115 60.0
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 4.5e-26 122.9 332 37.3
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 5.9e-26 122.5 408 31.9
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 1.0e-25 121.7 265 40.8
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 1.7e-25 120.9 245 38.0
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 1.7e-25 120.9 332 37.3
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 1.5e-24 117.9 256 36.3
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 1.9e-24 117.5 256 37.9
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 2.5e-24 117.1 222 40.5
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 5.6e-24 115.9 245 36.7
BcaC06g33977 Brassica carinata HOM05D004568 ORTHO05D005343 5.6e-24 115.9 223 40.8
C07p34410 Brassica napus HOM05D004568 ORTHO05D005343 5.6e-24 115.9 223 40.8
BolC7t43969H Brassica oleracea HOM05D004568 ORTHO05D005343 5.6e-24 115.9 223 40.8
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 7.3e-24 115.5 369 32.5
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 1.6e-23 114.4 339 33.0
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 2.1e-23 114.0 427 28.8
A06p42720 Brassica napus HOM05D004568 ORTHO05D005343 2.1e-23 114.0 224 39.7
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 2.8e-23 113.6 263 35.4
BcaC04g21428 Brassica carinata HOM05D004568 ORTHO05D005343 1.0e-22 111.7 335 33.1
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.0e-22 111.7 227 41.4
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 1.4e-22 111.3 236 38.1
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 1.4e-22 111.3 312 34.3
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 1.2e-21 108.2 296 35.1
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 3.4e-21 106.7 341 31.1
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 4.4e-21 106.3 321 33.0
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 7.5e-21 105.5 330 32.7
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 1.3e-20 104.8 263 34.6
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 6.4e-20 102.4 253 34.4
AL5G14100 Arabidopsis lyrata HOM05D004568 ORTHO05D005343 3.2e-19 100.1 255 35.3
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 3.2e-19 100.1 253 34.0
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 3.5e-18 96.7 229 33.6
C02p52170 Brassica napus HOM05D004568 ORTHO05D005343 3.0e-17 93.6 233 35.6
Carub.0005s0337 Capsella rubella HOM05D004568 ORTHO05D005343 5.0e-17 92.8 234 34.2
Lj3P1023T52 Lonicera japonica HOM05D004568 ORTHO05D005343 1.5e-16 91.3 179 43.0
Thhalv10004268m.g Eutrema salsugineum HOM05D004568 ORTHO05D005343 5.6e-16 89.4 255 34.5
unitig_26.g10277 Utricularia gibba HOM05D004568 ORTHO05D005343 1.8e-14 84.3 320 29.4
BraA02t08408Z Brassica rapa HOM05D004568 ORTHO05D005343 1.5e-13 81.3 256 32.4
Ah.12g062580 Amaranthus hybridus HOM05D004568 ORTHO05D005343 2.0e-13 80.9 184 37.0
A02p33910 Brassica napus HOM05D004568 ORTHO05D005343 2.0e-13 80.9 256 32.4
SEGI_17788 Sequoiadendron giganteum HOM05D004568 ORTHO05D005343 3.4e-13 80.1 146 37.0
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 5.8e-13 79.3 104 51.0
Haze_11818 Corylus avellana HOM05D004568 ORTHO05D005343 8.3e-12 75.5 224 33.5
Ah.06g195100 Amaranthus hybridus HOM05D004568 ORTHO05D005343 1.1e-11 75.1 325 30.5
Sp2g14860 Schrenkiella parvula HOM05D004568 ORTHO05D005343 4.1e-11 73.2 269 30.9
unitig_699.g19898 Utricularia gibba HOM05D004568 ORTHO05D005343 4.1e-11 73.2 126 34.1
BcaB07g30637 Brassica carinata HOM05D004568 ORTHO05D005343 1.7e-09 67.8 257 29.2
CDE04G2720 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 5.1e-09 66.2 130 34.6
BcaC06g31131 Brassica carinata HOM05D004568 ORTHO05D005343 2.5e-08 63.9 255 29.0


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