Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0365061 Helianthus annuus HOM05D004085 ORTHO05D005189 6.7e-187 657.1 317 100.0
ECA233G2807 Erigeron canadensis HOM05D004085 ORTHO05D005189 5.7e-162 574.3 317 84.2
Lsat_1_v5_gn_8_36601 Lactuca sativa HOM05D004085 ORTHO05D005189 1.8e-152 542.7 317 81.7
Dinv34021 Davidia involucrata HOM05D004085 ORTHO05D005189 6.3e-145 517.7 317 76.0
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 1.1e-144 516.9 315 75.6
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 5.0e-142 508.1 316 74.7
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 4.2e-141 505.0 316 74.4
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 6.1e-140 501.1 317 74.4
Hma1.2p1_0428F.1_g150850 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 2.3e-139 499.2 317 73.8
Lj3A1027G87 Lonicera japonica HOM05D004085 ORTHO05D005189 2.3e-139 499.2 367 64.9
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 2.3e-139 499.2 317 72.6
Nitab4.5_0001071g0010 Nicotiana tabacum HOM05D004085 ORTHO05D005189 2.3e-139 499.2 316 73.7
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 2.0e-138 496.1 316 73.1
Peaxi162Scf00873g00113 Petunia axillaris HOM05D004085 ORTHO05D005189 2.0e-138 496.1 320 72.8
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 2.6e-138 495.7 319 73.4
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 3.4e-138 495.4 315 72.7
Rhsim09G0122200 Rhododendron simsii HOM05D004085 ORTHO05D005189 3.4e-138 495.4 315 74.0
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 5.7e-138 494.6 315 72.1
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 2.8e-137 492.3 320 73.8
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 6.3e-137 491.1 319 72.1
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 1.1e-136 490.3 318 72.3
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 1.1e-136 490.3 318 72.6
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 1.8e-136 489.6 316 72.8
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 1.8e-136 489.6 318 72.0
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 4.1e-136 488.4 319 72.4
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 7.0e-136 487.6 318 71.7
Gohir.D02G131700 Gossypium hirsutum HOM05D004085 ORTHO05D005189 9.2e-136 487.3 319 72.1
Nitab4.5_0000591g0050 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.6e-135 486.5 314 72.3
Thecc.02G322800 Theobroma cacao HOM05D004085 ORTHO05D005189 2.0e-135 486.1 316 71.5
Ciclev10032152m.g Citrus clementina HOM05D004085 ORTHO05D005189 1.0e-134 483.8 316 71.2
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 1.3e-134 483.4 323 72.4
GSVIVG01008152001 Vitis vinifera HOM05D004085 ORTHO05D005189 1.3e-134 483.4 317 70.7
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 1.7e-134 483.0 320 71.9
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 2.3e-134 482.6 318 72.0
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 3.8e-134 481.9 315 71.7
Sc14g0007770 Simmondsia chinensis HOM05D004085 ORTHO05D005189 8.6e-134 480.7 316 72.2
PGR102G0161 Punica granatum HOM05D004085 ORTHO05D005189 1.1e-133 480.3 317 71.3
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 1.9e-133 479.6 314 71.7
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 1.9e-133 479.6 318 71.4
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 2.5e-133 479.2 315 70.2
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 2.5e-133 479.2 318 70.4
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 3.3e-133 478.8 320 71.2
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 1.2e-132 476.9 318 71.1
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 1.6e-132 476.5 317 70.3
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 1.6e-132 476.5 318 71.1
BcaC06g31165 Brassica carinata HOM05D004085 ORTHO05D005189 3.6e-132 475.3 316 69.6
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 4.7e-132 474.9 318 70.4
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 6.1e-132 474.6 323 71.5
BcaC06g31143 Brassica carinata HOM05D004085 ORTHO05D005189 1.0e-131 473.8 316 69.9
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 1.0e-131 473.8 315 69.2
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 1.4e-131 473.4 315 70.5
AL5G13590 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 1.8e-131 473.0 316 68.4
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 1.8e-131 473.0 340 67.1
MSTRG.779 Avicennia marina HOM05D004085 ORTHO05D005189 2.3e-131 472.6 318 70.8
C07p34240 Brassica napus HOM05D004085 ORTHO05D005189 3.0e-131 472.2 316 69.6
BolC7t43952H Brassica oleracea HOM05D004085 ORTHO05D005189 3.0e-131 472.2 316 69.6
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 5.2e-131 471.5 316 69.9
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 2.0e-130 469.5 316 70.3
THA.LOC104805212 Tarenaya hassleriana HOM05D004085 ORTHO05D005189 2.0e-130 469.5 319 69.9
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 2.6e-130 469.2 316 69.6
TAR629G1999 Trochodendron aralioides HOM05D004085 ORTHO05D005189 3.4e-130 468.8 315 69.2
MSTRG.7728 Avicennia marina HOM05D004085 ORTHO05D005189 4.4e-130 468.4 317 69.4
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 4.4e-130 468.4 315 66.7
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 5.7e-130 468.0 315 69.8
AL3G42500 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 7.5e-130 467.6 315 67.9
CARHR146210 Cardamine hirsuta HOM05D004085 ORTHO05D005189 7.5e-130 467.6 316 69.0
Carub.0005s0294 Capsella rubella HOM05D004085 ORTHO05D005189 9.8e-130 467.2 316 67.4
Aa31LG2G6920 Aethionema arabicum HOM05D004085 ORTHO05D005189 1.7e-129 466.5 331 65.0
SalBow2G2246 Salvia bowleyana HOM05D004085 ORTHO05D005189 1.7e-129 466.5 317 69.1
Sed0007813 Sechium edule HOM05D004085 ORTHO05D005189 1.7e-129 466.5 322 69.6
Cpa.g.sc1.168 Carica papaya HOM05D004085 ORTHO05D005189 2.2e-129 466.1 317 69.1
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 2.9e-129 465.7 317 69.7
Sp2g14620 Schrenkiella parvula HOM05D004085 ORTHO05D005189 2.9e-129 465.7 316 68.0
BcaC03g17242 Brassica carinata HOM05D004085 ORTHO05D005189 3.7e-129 465.3 316 68.4
AT2G03800 Arabidopsis thaliana HOM05D004085 ORTHO05D005189 1.1e-128 463.8 316 67.7
BolC2t11263H Brassica oleracea HOM05D004085 ORTHO05D005189 1.1e-128 463.8 316 68.0
Thhalv10004640m.g Eutrema salsugineum HOM05D004085 ORTHO05D005189 1.4e-128 463.4 316 68.4
A06p42850 Brassica napus HOM05D004085 ORTHO05D005189 1.8e-128 463.0 316 68.7
A02p33630 Brassica napus HOM05D004085 ORTHO05D005189 2.4e-128 462.6 316 67.7
BraA06t27197Z Brassica rapa HOM05D004085 ORTHO05D005189 4.1e-128 461.8 316 68.7
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 4.1e-128 461.8 317 69.4
Haze_11859 Corylus avellana HOM05D004085 ORTHO05D005189 4.1e-128 461.8 371 61.7
DCAR_011575 Daucus carota HOM05D004085 ORTHO05D005189 4.1e-128 461.8 316 68.0
CSS0028863 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.2e-127 460.3 315 68.9
C02p51780 Brassica napus HOM05D004085 ORTHO05D005189 2.7e-127 459.1 316 67.4
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 3.5e-127 458.8 315 69.2
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 4.6e-127 458.4 319 69.3
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 5.9e-127 458.0 315 68.9
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 7.8e-127 457.6 303 71.3
BcaB07g30279 Brassica carinata HOM05D004085 ORTHO05D005189 1.0e-126 457.2 316 67.7
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 1.0e-126 457.2 315 68.6
CDE01G0369 Ceratophyllum demersum HOM05D004085 ORTHO05D005189 6.6e-126 454.5 317 66.6
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 6.6e-126 454.5 319 67.4
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 3.6e-124 448.7 317 67.2
Duzib248G1362 Durio zibethinus HOM05D004085 ORTHO05D005189 6.2e-124 448.0 316 67.4
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 8.0e-124 447.6 317 67.2
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 4.0e-123 445.3 315 67.9
ATR0691G189 Amborella trichopoda HOM05D004085 ORTHO05D005189 2.6e-122 442.6 317 65.0
HanXRQChr05g0157451 Helianthus annuus HOM05D004085 ORTHO05D005189 4.4e-122 441.8 315 66.7
Hund25155 Selenicereus undatus HOM05D004085 ORTHO05D005189 7.5e-122 441.0 389 56.3
Potri.015G048700 Populus trichocarpa HOM05D004085 ORTHO05D005189 1.3e-121 440.3 315 65.7
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 1.7e-121 439.9 322 63.7
ECA246G2852 Erigeron canadensis HOM05D004085 ORTHO05D005189 3.7e-121 438.7 315 66.0
Os08g0339200 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 3.7e-121 438.7 320 66.6
Gohir.D11G037500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 6.4e-121 438.0 315 64.4
Gorai.007G040300 Gossypium raimondii HOM05D004085 ORTHO05D005189 6.4e-121 438.0 315 64.4
Sabra15G0078600 Salix brachista HOM05D004085 ORTHO05D005189 6.4e-121 438.0 315 65.4
CSS0030921 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.6e-119 433.3 317 66.6
AUR62007873 Chenopodium quinoa HOM05D004085 ORTHO05D005189 2.7e-119 432.6 315 66.7
Nitab4.5_0002449g0030 Nicotiana tabacum HOM05D004085 ORTHO05D005189 6.0e-119 431.4 317 66.9
Zm00001eb276680 Zea mays HOM05D004085 ORTHO05D005189 1.7e-118 429.9 321 64.5
Peaxi162Scf00013g00834 Petunia axillaris HOM05D004085 ORTHO05D005189 2.3e-118 429.5 307 67.1
EL10Ac6g14673 Beta vulgaris HOM05D004085 ORTHO05D005189 3.0e-118 429.1 336 62.8
Lsat_1_v5_gn_5_23401 Lactuca sativa HOM05D004085 ORTHO05D005189 3.0e-118 429.1 315 64.4
AUR62003058 Chenopodium quinoa HOM05D004085 ORTHO05D005189 3.9e-118 428.7 315 65.4
CSS0006421 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.6e-116 423.3 315 64.1
COL.COLO4_27493 Corchorus olitorius HOM05D004085 ORTHO05D005189 1.4e-115 420.2 289 65.7
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 1.5e-114 416.8 317 64.0
Manes.06G081100 Manihot esculenta HOM05D004085 ORTHO05D005189 9.8e-114 414.1 318 63.2
Migut.L01162 Erythranthe guttata HOM05D004085 ORTHO05D005189 8.3e-113 411.0 279 70.3
FAN07G2517 Fragaria x ananassa HOM05D004085 ORTHO05D005189 5.4e-112 408.3 406 53.4
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 1.7e-110 403.3 266 70.7
HPP92_003714 Vanilla planifolia HOM05D004085 ORTHO05D005189 4.3e-109 398.7 289 66.1
Mapoly0007s0171 Marchantia polymorpha HOM05D004085 ORTHO05D005189 8.1e-108 394.4 324 58.3
SHI14335 Sapria himalayana HOM05D004085 ORTHO05D005189 1.4e-104 383.6 333 56.5
Lj5A137T62 Lonicera japonica HOM05D004085 ORTHO05D005189 1.6e-103 380.2 289 64.7
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 6.0e-103 378.3 315 58.1
Cpa.g.sc3.236 Carica papaya HOM05D004085 ORTHO05D005189 6.6e-102 374.8 336 55.7
SMO146G0350 Selaginella moellendorffii HOM05D004085 ORTHO05D005189 1.5e-101 373.6 322 56.8
COL.COLO4_27802 Corchorus olitorius HOM05D004085 ORTHO05D005189 4.7e-100 368.6 321 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2928 Anthoceros agrestis HOM05D004085 ORTHO05D005189 1.2e-98 364.0 317 56.5
Pp3c3_10070 Physcomitrium patens HOM05D004085 ORTHO05D005189 8.4e-97 357.8 317 56.5
Pp3c4_31680 Physcomitrium patens HOM05D004085 ORTHO05D005189 4.2e-96 355.5 317 54.9
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 1.6e-95 353.6 300 62.0
Nn3g17533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 8.1e-92 341.3 289 58.5
BraA02t08382Z Brassica rapa HOM05D004085 ORTHO05D005189 1.2e-90 337.4 225 70.2
Eucgr.K02549 Eucalyptus grandis HOM05D004085 ORTHO05D005189 1.2e-90 337.4 317 53.0
Oeu045347.1 Olea europaea HOM05D004085 ORTHO05D005189 2.4e-88 329.7 243 65.4
CBR_g34346 Chara braunii HOM05D004085 ORTHO05D005189 5.6e-85 318.5 353 43.3
unitig_22.g6891 Utricularia gibba HOM05D004085 ORTHO05D005189 2.8e-76 289.7 218 61.9
FvH4_4g29300 Fragaria vesca HOM05D004085 ORTHO05D005189 3.1e-75 286.2 199 68.3
arahy.Tifrunner.gnm1.ann1.A9XC2E Arachis hypogaea HOM05D004085 ORTHO05D005189 1.1e-72 277.7 185 72.4
PGSC0003DMG401004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.8e-67 260.4 180 70.6
C07p34190 Brassica napus HOM05D004085 ORTHO05D005189 7.4e-61 238.4 185 64.3
Os09g0248000 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 1.2e-58 231.1 165 66.1
Solyc04g005300.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.6e-58 229.9 140 72.1
TPR.G27985 Trifolium pratense HOM05D004085 ORTHO05D005189 1.2e-55 221.1 151 70.2
CSS0002590 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 4.6e-55 219.2 305 43.9
Oeu045348.1 Olea europaea HOM05D004085 ORTHO05D005189 1.7e-52 210.7 144 69.4
MBI10_g36395_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 9.7e-45 184.9 148 56.8
BolC7t43946H Brassica oleracea HOM05D004085 ORTHO05D005189 4.0e-38 162.9 99 72.7
Peaxi162Scf00098g00096 Petunia axillaris HOM05D004085 ORTHO05D005189 1.5e-37 161.0 120 65.0
HPP92_003722 Vanilla planifolia HOM05D004085 ORTHO05D005189 2.4e-35 153.7 124 60.5
SEGI_05680 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 2.9e-33 146.7 110 63.6
MD05G1127700 Malus domestica HOM05D004085 ORTHO05D005189 8.0e-31 138.7 93 71.0
TPR.G40588 Trifolium pratense HOM05D004085 ORTHO05D005189 1.3e-28 131.3 75 74.7
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 4.8e-28 129.4 93 65.6
Lj3C737G8 Lonicera japonica HOM05D004085 ORTHO05D005189 1.8e-27 127.5 75 72.0
BolC7t43934H Brassica oleracea HOM05D004085 ORTHO05D005189 6.5e-25 119.0 105 59.0
Thecc.03G108100 Theobroma cacao HOM05D004085 ORTHO05D026373 4.4e-21 106.3 86 55.8
Duzib068G1264 Durio zibethinus HOM05D004085 ORTHO05D005189 3.7e-20 103.2 67 65.7
Actinidia04797 Actinidia chinensis HOM05D004085 ORTHO05D026373 4.9e-20 102.8 74 63.5
Lj5A720T31 Lonicera japonica HOM05D004085 ORTHO05D026373 2.4e-19 100.5 165 37.6
SEGI_34269 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 2.4e-19 100.5 57 75.4
BcaC06g31148 Brassica carinata HOM05D004085 ORTHO05D005189 5.7e-13 79.3 69 56.5
Ciclev10024148m.g Citrus clementina HOM05D004085 ORTHO05D043374 3.7e-12 76.6 42 78.6
CANSAT64G2585 Cannabis sativa HOM05D004085 ORTHO05D043374 4.6e-10 69.7 55 58.2
Eucgr.B03119 Eucalyptus grandis HOM05D004085 ORTHO05D195170 6.2e-07 59.3 104 38.5
HPP92_003723 Vanilla planifolia HOM05D004085 ORTHO05D005189 8.9e-06 55.5 79 46.8


User provided reference genes

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