Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 1.2e-33 146.0 79 100.0
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 2.2e-30 135.2 79 88.6
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 2.9e-30 134.8 79 88.6
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 6.4e-30 133.7 79 88.6
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 1.4e-29 132.5 79 87.3
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 1.4e-29 132.5 74 94.6
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 1.4e-29 132.5 79 88.6
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 2.1e-28 128.6 79 83.5
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 2.7e-28 128.3 79 84.8
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 2.7e-28 128.3 79 84.8
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 2.7e-28 128.3 79 82.3
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 3.5e-28 127.9 77 89.6
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 4.6e-28 127.5 79 84.8
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 6.0e-28 127.1 79 82.3
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 6.0e-28 127.1 79 83.5
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 6.0e-28 127.1 79 83.5
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 7.8e-28 126.7 79 81.0
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 7.8e-28 126.7 79 82.3
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 7.8e-28 126.7 79 83.5
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 7.8e-28 126.7 78 83.3
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 1.0e-27 126.3 79 83.5
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.3e-27 125.9 79 83.5
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.3e-27 125.9 79 83.5
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 1.3e-27 125.9 79 83.5
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 1.3e-27 125.9 79 83.5
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 1.7e-27 125.6 79 83.5
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 3.9e-27 124.4 79 77.2
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 3.9e-27 124.4 79 81.0
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 8.7e-27 123.2 80 86.2
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 1.1e-26 122.9 74 87.8
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 1.1e-26 122.9 74 87.8
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.5e-26 122.5 74 85.1
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 1.5e-26 122.5 74 85.1
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.9e-26 122.1 74 85.1
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 1.9e-26 122.1 74 81.1
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 1.9e-26 122.1 74 89.2
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 1.9e-26 122.1 74 89.2
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 2.5e-26 121.7 79 81.0
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 2.5e-26 121.7 79 81.0
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 2.5e-26 121.7 74 81.1
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 3.3e-26 121.3 74 85.1
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.3e-26 121.3 79 79.7
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 3.3e-26 121.3 73 84.9
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 4.3e-26 120.9 76 81.6
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 4.3e-26 120.9 76 81.6
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 4.3e-26 120.9 79 79.7
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 7.3e-26 120.2 74 83.8
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 7.3e-26 120.2 74 83.8
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 7.3e-26 120.2 74 83.8
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 7.3e-26 120.2 74 83.8
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 9.6e-26 119.8 76 80.3
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.2e-25 119.4 79 79.7
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 1.2e-25 119.4 74 83.8
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 1.6e-25 119.0 74 82.4
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 1.6e-25 119.0 74 82.4
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 1.6e-25 119.0 79 74.7
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 1.6e-25 119.0 79 77.2
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 2.1e-25 118.6 79 75.9
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 2.1e-25 118.6 76 82.9
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 2.1e-25 118.6 79 73.4
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 2.1e-25 118.6 74 81.1
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 2.8e-25 118.2 77 80.5
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 3.6e-25 117.9 79 73.4
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 3.6e-25 117.9 78 78.2
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 4.7e-25 117.5 78 75.6
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 8.1e-25 116.7 74 79.7
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 1.1e-24 116.3 79 77.2
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 1.1e-24 116.3 78 78.2
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 1.4e-24 115.9 74 81.1
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 1.8e-24 115.5 76 82.9
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 2.4e-24 115.2 79 77.2
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 2.4e-24 115.2 79 74.7
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 5.2e-24 114.0 78 76.9
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 5.2e-24 114.0 79 73.4
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 9.0e-24 113.2 78 76.9
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.2e-23 112.8 77 77.9
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 1.2e-23 112.8 76 80.3
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 1.5e-23 112.5 76 80.3
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 1.5e-23 112.5 76 80.3
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 2.0e-23 112.1 76 80.3
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 2.0e-23 112.1 76 76.3
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 2.0e-23 112.1 79 72.2
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 3.4e-23 111.3 76 78.9
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 3.4e-23 111.3 76 78.9
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 4.4e-23 110.9 76 78.9
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 4.4e-23 110.9 76 76.3
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 5.8e-23 110.5 75 78.7
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 7.6e-23 110.2 77 76.6
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 9.9e-23 109.8 76 77.6
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 9.9e-23 109.8 74 78.4
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.3e-22 109.4 74 77.0
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.3e-22 109.4 74 77.0
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 1.3e-22 109.4 74 75.7
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 2.2e-22 108.6 76 73.7
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 2.9e-22 108.2 79 73.4
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 2.9e-22 108.2 79 72.2
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 8.4e-22 106.7 76 76.3
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 8.4e-22 106.7 77 75.3
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 8.4e-22 106.7 76 76.3
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 8.4e-22 106.7 76 71.1
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 1.4e-21 105.9 74 73.0
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 1.4e-21 105.9 75 72.0
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 2.4e-21 105.1 77 74.0
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 4.2e-21 104.4 76 71.1
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 4.2e-21 104.4 68 77.9
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 5.4e-21 104.0 71 74.6
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 7.1e-21 103.6 76 71.1
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 7.1e-21 103.6 63 87.3
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 2.7e-20 101.7 76 69.7
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 4.6e-20 100.9 74 68.9
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 7.8e-20 100.1 79 67.1
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 7.8e-20 100.1 63 82.5
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 3.0e-19 98.2 63 84.1
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 3.0e-19 98.2 98 61.2
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 3.0e-19 98.2 58 82.8
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 6.6e-19 97.1 68 73.5
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 6.6e-19 97.1 62 82.3
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 8.7e-19 96.7 102 58.8
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.9e-18 95.5 60 78.3
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 4.3e-18 94.4 73 67.1
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 7.3e-18 93.6 63 82.5
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 7.3e-18 93.6 56 92.9
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 2.1e-17 92.0 98 59.2
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 8.1e-17 90.1 74 67.6
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 1.2e-15 86.3 75 60.0
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 1.3e-14 82.8 63 76.2
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 5.4e-13 77.4 47 89.4
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 5.1e-11 70.9 96 52.1
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 1.5e-10 69.3 46 80.4
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 7.4e-10 67.0 37 94.6
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 2.1e-09 65.5 47 72.3
Pp3c7_2400 Physcomitrium patens HOM05D006545 ORTHO05D007985 2.4e-08 62.0 128 35.2
Actinidia25251 Actinidia chinensis HOM05D006545 ORTHO05D007985 4.5e-07 57.8 46 76.1
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 9.9e-07 56.6 36 66.7
Sed0013060 Sechium edule HOM05D000140 ORTHO05D000087 4.9e-06 54.3 32 75.0


User provided reference genes

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