Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.6e-214 749.2 387 100.0
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 1.7e-163 579.7 360 83.9
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 2.4e-162 575.9 337 87.8
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 2.8e-147 525.8 337 80.7
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 3.7e-147 525.4 348 77.9
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 6.3e-147 524.6 337 81.0
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.2e-145 520.4 329 80.2
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.6e-145 520.0 337 80.1
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.9e-143 513.1 337 78.9
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 2.5e-143 512.7 337 78.9
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 4.2e-143 511.9 337 78.3
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 9.4e-143 510.8 337 79.8
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.4e-141 506.9 336 77.4
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 4.0e-141 505.4 337 76.6
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 6.8e-141 504.6 337 77.7
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 8.8e-141 504.2 337 76.3
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 2.6e-140 502.7 337 77.2
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 5.7e-140 501.5 337 77.7
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 9.8e-140 500.7 334 76.6
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 1.7e-139 500.0 335 77.0
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 6.3e-139 498.0 337 76.9
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 6.3e-139 498.0 337 76.9
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 8.3e-139 497.7 331 74.3
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.1e-138 497.3 334 75.4
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 1.1e-138 497.3 337 75.1
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.4e-138 496.9 337 77.4
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 2.4e-138 496.1 374 72.2
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 3.1e-138 495.7 323 78.6
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 4.1e-138 495.4 333 76.9
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 5.4e-138 495.0 344 73.8
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 9.1e-138 494.2 337 76.3
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 1.6e-137 493.4 337 76.3
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 1.6e-137 493.4 333 76.3
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.6e-137 493.4 321 78.5
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 2.7e-137 492.7 332 75.3
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 3.5e-137 492.3 337 76.3
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 5.9e-137 491.5 336 74.1
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 7.7e-137 491.1 336 74.4
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.3e-136 490.3 334 75.4
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 1.7e-136 490.0 323 78.0
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 3.8e-136 488.8 335 74.0
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 6.6e-136 488.0 336 74.1
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.1e-135 487.3 336 74.7
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 1.9e-135 486.5 337 74.2
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 4.2e-135 485.3 333 76.3
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 5.5e-135 485.0 321 76.3
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 7.2e-135 484.6 337 76.3
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.6e-134 483.4 336 75.0
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 3.6e-134 482.3 328 76.2
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 4.7e-134 481.9 338 73.7
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 4.7e-134 481.9 338 73.4
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 6.1e-134 481.5 336 74.4
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 8.0e-134 481.1 323 76.8
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 8.0e-134 481.1 338 73.4
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 8.0e-134 481.1 331 73.7
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.4e-133 480.3 329 74.2
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 2.3e-133 479.6 336 74.4
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.3e-133 479.6 331 74.9
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 3.0e-133 479.2 316 78.5
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 3.0e-133 479.2 329 73.6
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 5.2e-133 478.4 337 73.3
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 6.8e-133 478.0 329 73.6
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 6.8e-133 478.0 336 73.8
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 8.9e-133 477.6 334 73.7
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 3.4e-132 475.7 328 74.7
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 3.4e-132 475.7 337 73.3
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 5.7e-132 474.9 322 75.8
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 9.8e-132 474.2 338 73.1
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 4.9e-131 471.9 337 71.2
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 2.0e-129 466.5 327 74.3
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 7.8e-129 464.5 332 70.5
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 3.8e-128 462.2 353 69.4
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 6.6e-128 461.5 346 71.1
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.5e-127 460.3 345 68.1
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 2.5e-127 459.5 357 67.8
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.2e-124 450.7 398 63.1
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.3e-123 447.2 332 70.2
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.7e-121 439.5 337 68.2
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 7.8e-121 438.0 337 70.9
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 3.3e-119 432.6 321 70.1
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.4e-114 416.4 334 67.1
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 7.0e-114 414.8 282 76.6
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 6.0e-113 411.8 302 70.2
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 1.3e-112 410.6 341 64.5
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 2.5e-111 406.4 336 65.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 1.2e-110 404.1 340 63.5
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 5.4e-106 388.7 329 62.9
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 4.0e-101 372.5 331 56.8
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 8.9e-101 371.3 255 73.3
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.9e-95 353.6 333 53.2
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.9e-90 337.0 321 53.6
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 2.7e-89 333.2 242 71.1
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.7e-88 330.5 207 79.7
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.5e-84 317.4 194 80.4
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 3.2e-82 309.7 241 69.3
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.2e-81 307.8 334 48.8
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 1.3e-78 297.7 185 78.9
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.7e-78 296.2 326 47.5
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 1.1e-74 284.6 201 76.6
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 3.1e-69 266.5 327 47.4
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.5e-66 255.8 326 42.9
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 3.5e-65 253.1 370 45.4
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 3.9e-64 249.6 358 39.9
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.1e-58 231.5 173 65.9
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 2.4e-53 213.8 153 73.2
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.6e-49 201.1 172 53.5
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.9e-43 180.3 300 41.7
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 8.5e-43 178.7 283 42.4
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 2.1e-41 174.1 332 31.6
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 4.4e-39 166.4 126 71.4
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.1e-34 151.8 124 66.9
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.2e-31 141.7 89 77.5
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 5.4e-21 106.3 341 26.4
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 5.9e-20 102.8 74 63.5
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.7e-14 84.7 67 64.2
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.5e-12 76.6 68 60.3
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.5e-12 76.6 68 60.3


User provided reference genes

Program Settings