Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.5e-83 312.8 156 100.0
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 3.6e-77 291.6 156 92.9
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 7.1e-73 277.3 156 87.8
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.5e-67 259.6 154 81.8
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 3.4e-67 258.5 146 86.3
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 7.6e-67 257.3 156 80.8
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 2.2e-66 255.8 154 80.5
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 3.8e-66 255.0 154 79.9
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 4.9e-66 254.6 156 78.8
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 6.4e-66 254.2 154 78.6
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 2.4e-65 252.3 156 78.8
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 3.2e-65 251.9 154 80.5
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 4.2e-65 251.5 145 83.4
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 7.1e-65 250.8 156 77.6
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 9.3e-65 250.4 152 80.3
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 9.3e-65 250.4 145 83.4
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 9.3e-65 250.4 156 78.8
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.6e-64 249.6 154 77.3
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.6e-64 249.6 154 77.9
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 6.0e-64 247.7 153 77.1
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 6.0e-64 247.7 154 77.3
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.0e-63 246.9 156 75.6
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.3e-63 246.5 153 76.5
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.3e-63 246.5 146 80.1
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.7e-63 246.1 149 79.9
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.3e-63 245.7 152 80.3
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 3.0e-63 245.4 156 75.0
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 3.9e-63 245.0 148 78.4
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 3.9e-63 245.0 156 75.6
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 5.1e-63 244.6 156 75.6
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 6.6e-63 244.2 146 78.8
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 6.6e-63 244.2 156 74.4
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 8.7e-63 243.8 156 73.7
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 8.7e-63 243.8 154 75.3
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 8.7e-63 243.8 156 75.0
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 1.1e-62 243.4 146 79.5
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.5e-62 243.0 154 74.7
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 1.9e-62 242.7 146 80.1
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.5e-62 242.3 154 75.3
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.5e-62 242.3 155 74.2
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.5e-62 242.3 152 75.0
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 3.3e-62 241.9 154 76.0
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 3.3e-62 241.9 147 79.6
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 3.3e-62 241.9 152 75.7
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 4.3e-62 241.5 154 75.3
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 4.3e-62 241.5 155 75.5
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 5.6e-62 241.1 154 75.3
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 5.6e-62 241.1 148 79.1
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 7.3e-62 240.7 148 78.4
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.6e-62 240.4 156 72.4
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.6e-62 240.4 156 72.4
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.3e-61 240.0 154 74.7
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.6e-61 239.6 156 71.8
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.8e-61 238.8 151 74.8
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 8.1e-61 237.3 156 73.1
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 1.4e-60 236.5 152 75.0
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.8e-60 236.1 152 73.7
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 2.4e-60 235.7 146 76.0
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 2.4e-60 235.7 176 68.2
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 3.1e-60 235.3 152 73.7
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 3.1e-60 235.3 143 80.4
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 4.0e-60 235.0 154 72.7
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 4.0e-60 235.0 156 72.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 6.9e-60 234.2 154 72.7
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 9.0e-60 233.8 171 69.0
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.5e-59 233.0 141 78.0
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.5e-59 233.0 145 75.2
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.5e-59 233.0 156 71.2
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.6e-59 232.3 142 76.8
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 3.4e-59 231.9 154 71.4
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.8e-59 231.1 184 63.6
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 7.6e-59 230.7 184 63.6
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 1.3e-58 229.9 154 72.1
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.3e-58 229.9 156 73.1
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 8.4e-58 227.3 150 70.0
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.1e-57 226.9 184 62.5
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 9.3e-57 223.8 190 61.1
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 1.6e-56 223.0 156 65.4
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 6.0e-56 221.1 154 69.5
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.3e-55 219.9 154 68.8
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.8e-47 193.0 220 48.6
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 8.2e-37 157.5 88 85.2
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.3e-34 150.2 122 63.9
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 7.4e-30 134.4 87 73.6
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 5.0e-18 95.1 141 36.9
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 2.2e-10 69.7 118 36.4
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 2.0e-06 56.6 37 73.0


User provided reference genes

Program Settings