Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 2.4e-273 944.9 470 100.0
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 2.7e-245 851.7 470 87.2
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 4.1e-241 837.8 473 86.9
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.2e-227 793.1 467 80.7
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.1e-225 786.6 464 80.2
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.9e-222 775.8 499 76.0
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.2e-221 773.1 470 78.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 1.8e-220 769.2 462 78.8
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 6.8e-220 767.3 469 77.2
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 8.9e-220 766.9 461 78.7
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 1.2e-219 766.5 464 77.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.0e-219 765.8 464 76.9
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 2.6e-219 765.4 461 78.7
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 2.6e-219 765.4 469 77.6
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 4.4e-219 764.6 461 77.9
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.3e-218 763.1 465 78.7
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 3.7e-218 761.5 465 77.8
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 3.7e-218 761.5 463 78.2
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 4.9e-218 761.1 470 76.8
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 7.0e-217 757.3 464 76.7
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.7e-216 755.4 461 77.7
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 7.8e-216 753.8 465 77.0
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 7.8e-216 753.8 465 77.2
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 1.0e-215 753.4 465 76.8
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.3e-215 753.1 461 76.1
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 3.0e-215 751.9 472 76.1
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 8.6e-215 750.4 461 75.9
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.9e-214 749.2 461 75.1
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.8e-213 745.3 468 75.0
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 3.1e-212 741.9 469 75.1
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 5.2e-212 741.1 494 72.9
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.2e-211 740.0 462 77.3
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.5e-211 739.6 468 73.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 9.8e-211 736.9 543 67.6
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 6.4e-210 734.2 461 74.8
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.4e-209 733.0 491 70.3
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.2e-208 729.9 491 70.5
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.6e-208 729.6 461 74.6
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.1e-208 729.2 494 70.4
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 4.6e-208 728.0 471 73.2
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 2.3e-207 725.7 493 70.6
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 2.3e-207 725.7 461 74.0
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.1e-206 723.4 461 73.8
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.5e-206 723.0 461 73.1
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.5e-206 722.2 461 74.0
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 9.5e-206 720.3 461 73.8
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 4.7e-205 718.0 461 72.2
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 8.1e-205 717.2 499 69.5
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 7.5e-203 710.7 461 72.9
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 1.7e-202 709.5 470 70.9
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 3.2e-201 705.3 466 73.2
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 4.6e-200 701.4 538 66.0
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 3.9e-199 698.4 470 70.6
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 7.3e-198 694.1 502 66.3
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 4.0e-196 688.3 461 69.8
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.2e-192 676.8 469 71.0
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.6e-189 666.4 460 67.2
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 6.2e-189 664.5 461 67.5
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 9.9e-187 657.1 393 79.4
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 9.9e-187 657.1 468 67.5
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.3e-186 656.8 409 76.3
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 3.2e-185 652.1 469 67.2
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.7e-184 649.0 461 66.6
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 3.5e-184 648.7 402 74.9
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 3.5e-184 648.7 459 64.5
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 4.6e-184 648.3 382 79.1
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.8e-180 636.3 400 75.2
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.8e-180 636.3 400 75.2
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 4.5e-179 631.7 461 67.5
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.4e-177 625.9 415 71.6
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 6.0e-176 621.3 461 66.2
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 9.6e-174 614.0 469 65.2
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.1e-169 600.5 513 60.4
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.5e-169 599.4 378 75.4
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 2.7e-168 595.9 365 78.9
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.1e-161 573.9 461 61.8
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 3.9e-159 565.5 324 82.4
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 9.4e-153 544.3 368 72.3
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 5.1e-151 538.5 333 76.6
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.4e-147 525.8 373 71.3
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.2e-118 431.0 268 75.0
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 8.9e-103 378.3 230 77.0
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 3.2e-76 290.0 156 92.9
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 9.6e-73 278.5 171 77.8
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 6.4e-69 265.8 445 33.3
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 5.8e-54 216.1 236 52.1
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.3e-50 204.1 159 66.7
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.4e-47 194.9 122 77.0
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.9e-28 131.3 426 26.5
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 2.8e-24 117.5 388 26.3
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 5.9e-22 109.8 77 62.3
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 6.7e-18 96.3 347 25.4
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 1.3e-16 92.0 393 24.4
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 7.7e-14 82.8 57 68.4
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 9.8e-09 65.9 353 24.4
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 8.3e-08 62.8 263 27.0
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 1.2e-06 58.9 50 48.0


User provided reference genes

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