Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 3.8e-102 374.8 180 100.0
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 1.4e-93 346.3 180 91.1
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 9.0e-88 327.0 180 85.0
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 3.8e-86 321.6 180 83.3
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 6.4e-86 320.9 180 82.8
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 1.9e-85 319.3 180 82.8
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 1.9e-85 319.3 180 80.0
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 2.4e-85 318.9 180 82.2
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 2.4e-85 318.9 180 82.8
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 3.2e-85 318.5 180 79.4
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 5.5e-85 317.8 180 83.3
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 5.5e-85 317.8 180 81.1
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 7.1e-85 317.4 180 81.1
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 7.1e-85 317.4 180 82.8
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 7.1e-85 317.4 180 82.8
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 9.3e-85 317.0 199 76.9
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 1.2e-84 316.6 180 80.6
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 1.2e-84 316.6 180 82.2
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 2.1e-84 315.8 180 82.2
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 2.1e-84 315.8 180 81.1
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 2.1e-84 315.8 180 80.6
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 2.7e-84 315.5 180 80.6
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 3.5e-84 315.1 179 80.4
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 3.5e-84 315.1 180 82.2
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 6.0e-84 314.3 180 81.7
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 6.0e-84 314.3 180 81.7
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 6.0e-84 314.3 180 81.1
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 7.9e-84 313.9 180 82.8
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 1.8e-83 312.8 180 81.1
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 1.8e-83 312.8 180 81.1
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 3.0e-83 312.0 180 80.6
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 3.9e-83 311.6 180 81.7
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 6.7e-83 310.8 180 78.3
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 6.7e-83 310.8 180 80.6
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 6.7e-83 310.8 187 80.2
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 1.1e-82 310.1 180 78.3
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 1.5e-82 309.7 180 78.9
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 3.3e-82 308.5 180 80.6
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 4.3e-82 308.1 180 78.3
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 5.6e-82 307.8 180 78.3
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 5.6e-82 307.8 180 78.9
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 9.6e-82 307.0 180 78.3
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 9.6e-82 307.0 181 79.6
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 9.6e-82 307.0 180 78.3
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 9.6e-82 307.0 180 77.2
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 9.6e-82 307.0 180 77.8
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 1.3e-81 306.6 180 78.3
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 1.3e-81 306.6 180 78.9
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 2.1e-81 305.8 180 78.9
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 2.8e-81 305.4 180 79.4
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 3.7e-81 305.1 180 78.3
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.7e-81 305.1 180 78.9
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.7e-81 305.1 180 78.9
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 3.7e-81 305.1 180 78.3
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 4.8e-81 304.7 180 78.3
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 6.2e-81 304.3 180 77.8
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 6.2e-81 304.3 180 80.0
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 8.1e-81 303.9 180 77.8
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 8.1e-81 303.9 180 77.8
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 8.1e-81 303.9 180 77.2
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 1.1e-80 303.5 180 77.8
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 1.4e-80 303.1 180 77.8
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 1.8e-80 302.8 180 78.3
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 1.8e-80 302.8 180 76.7
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 5.3e-80 301.2 180 77.8
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 6.9e-80 300.8 180 77.2
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 6.9e-80 300.8 156 91.0
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 9.0e-80 300.4 180 77.2
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 1.2e-79 300.1 181 78.5
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 5.8e-79 297.7 180 76.1
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 3.8e-78 295.0 179 75.4
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 7.1e-77 290.8 160 84.4
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 3.5e-76 288.5 180 75.0
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 6.0e-76 287.7 159 84.9
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 1.0e-75 287.0 165 79.4
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 1.8e-75 286.2 203 68.0
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 3.0e-75 285.4 159 85.5
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 1.9e-74 282.7 206 67.5
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 7.4e-74 280.8 160 81.2
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 9.6e-74 280.4 180 73.3
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 6.3e-73 277.7 177 75.1
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 6.3e-73 277.7 161 77.6
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 1.4e-72 276.6 175 74.3
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 3.4e-71 271.9 160 76.9
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 3.4e-71 271.9 172 77.3
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 1.3e-70 270.0 167 76.0
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 5.0e-70 268.1 162 74.1
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 6.5e-70 267.7 175 68.0
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 8.5e-70 267.3 164 75.6
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 8.5e-70 267.3 176 68.8
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 1.1e-69 266.9 180 72.2
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 7.2e-69 264.2 180 68.9
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 1.6e-65 253.1 174 64.9
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 5.3e-64 248.1 153 76.5
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 1.5e-63 246.5 174 61.5
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 2.9e-62 242.3 139 79.1
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 8.5e-62 240.7 218 58.3
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 7.2e-61 237.7 139 77.7
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 4.6e-60 235.0 176 60.2
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 3.3e-58 228.8 181 65.7
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 1.5e-50 203.4 121 75.2
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 9.7e-50 200.7 118 75.4
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 1.4e-48 196.8 173 51.4
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 5.3e-48 194.9 117 72.6
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 3.8e-46 188.7 118 70.3
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 1.8e-43 179.9 185 53.0
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 1.8e-43 179.9 185 53.0
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 1.7e-38 163.3 175 45.1
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 3.8e-38 162.2 115 69.6
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 2.5e-37 159.5 92 76.1
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 4.7e-36 155.2 95 73.7
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 2.0e-34 149.8 176 42.6
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 3.4e-34 149.1 116 61.2
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 5.7e-34 148.3 91 73.6
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 4.8e-33 145.2 177 46.3
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.2e-28 130.6 79 73.4
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 5.9e-23 111.7 69 69.6
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 5.6e-21 105.1 65 75.4
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 9.5e-21 104.4 92 59.8
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 1.4e-19 100.5 56 83.9
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 7.5e-18 94.7 93 59.1
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 2.9e-17 92.8 56 80.4
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 3.2e-16 89.4 50 82.0
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 1.2e-15 87.4 46 87.0
Gohir.D12G043050 Gossypium hirsutum HOM05D006675 ORTHO05D008302 1.6e-07 60.5 38 73.7
Phvul.002G134150 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 6.6e-06 55.1 57 50.9


User provided reference genes

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