Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0361791 Helianthus annuus HOM05D003448 ORTHO05D004028 2.2e-86 322.4 176 100.0
HanXRQChr12g0361771 Helianthus annuus HOM05D003448 ORTHO05D004028 9.5e-42 174.1 181 58.6
HanXRQChr12g0361861 Helianthus annuus HOM05D003448 ORTHO05D004028 5.1e-35 151.8 168 56.5
Lsat_1_v5_gn_8_49260 Lactuca sativa HOM05D003448 ORTHO05D004028 2.5e-34 149.4 186 51.1
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 1.6e-33 146.7 187 49.2
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 1.9e-29 133.3 193 48.7
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.9e-26 123.2 191 45.5
Lsat_1_v5_gn_8_49200 Lactuca sativa HOM05D003448 ORTHO05D004028 3.3e-26 122.5 170 47.1
Lj6P783T35 Lonicera japonica HOM05D003448 ORTHO05D004028 6.2e-25 118.2 186 46.8
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 1.4e-24 117.1 185 46.5
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.8e-24 116.7 185 45.4
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 1.8e-24 116.7 190 43.7
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 4.0e-24 115.5 196 41.3
Lsat_1_v5_gn_8_49240 Lactuca sativa HOM05D003448 ORTHO05D004028 6.9e-24 114.8 181 45.3
HanXRQChr12g0379221 Helianthus annuus HOM05D003448 ORTHO05D004028 1.5e-23 113.6 196 42.3
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 5.8e-23 111.7 193 42.0
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 7.6e-23 111.3 193 42.0
Actinidia12305 Actinidia chinensis HOM05D003448 ORTHO05D004028 1.3e-22 110.5 167 43.1
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 1.7e-22 110.2 192 41.7
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 2.2e-22 109.8 186 44.6
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 3.8e-22 109.0 182 41.2
CSS0006655 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.4e-21 107.1 170 44.1
ECA246G1613 Erigeron canadensis HOM05D003448 ORTHO05D004028 1.9e-21 106.7 142 47.9
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 7.1e-21 104.8 176 43.2
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 7.1e-21 104.8 176 43.2
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 1.6e-20 103.6 189 39.2
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 2.7e-20 102.8 169 41.4
Haze_11952 Corylus avellana HOM05D003448 ORTHO05D004028 2.7e-20 102.8 167 42.5
Eucgr.G02471 Eucalyptus grandis HOM05D003448 ORTHO05D004028 7.8e-20 101.3 168 44.6
DCAR_023813 Daucus carota HOM05D003448 ORTHO05D004028 1.3e-19 100.5 202 41.1
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 2.3e-19 99.8 194 39.7
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 3.9e-19 99.0 184 39.1
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 3.9e-19 99.0 184 39.1
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 5.1e-19 98.6 150 42.0
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 5.1e-19 98.6 178 40.4
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 6.6e-19 98.2 183 38.8
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 8.7e-19 97.8 193 41.5
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 8.7e-19 97.8 195 39.0
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 1.5e-18 97.1 198 38.9
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 2.5e-18 96.3 195 38.5
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 3.3e-18 95.9 160 40.6
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 3.3e-18 95.9 170 38.8
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 4.3e-18 95.5 161 41.0
Aqoxy3G03502 Aquilegia oxysepala HOM05D003448 ORTHO05D004028 5.6e-18 95.1 199 38.7
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 5.6e-18 95.1 190 38.9
Aa31LG2G7210 Aethionema arabicum HOM05D003448 ORTHO05D004028 9.6e-18 94.4 178 39.3
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 9.6e-18 94.4 188 39.4
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 9.6e-18 94.4 189 41.8
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 9.6e-18 94.4 191 39.8
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 1.3e-17 94.0 162 42.0
Carub.0005s0231 Capsella rubella HOM05D003448 ORTHO05D004028 1.6e-17 93.6 188 37.2
Thhalv10005445m.g Eutrema salsugineum HOM05D003448 ORTHO05D004028 1.6e-17 93.6 172 39.5
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 2.8e-17 92.8 176 40.9
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 2.8e-17 92.8 166 41.0
BcaC04g21492 Brassica carinata HOM05D003448 ORTHO05D004028 3.6e-17 92.4 183 38.8
BolC9t55975H Brassica oleracea HOM05D003448 ORTHO05D004028 3.6e-17 92.4 183 38.8
Ca_25944_v3 Cicer arietinum L. HOM05D003448 ORTHO05D004028 4.8e-17 92.0 158 39.9
AUR62005855 Chenopodium quinoa HOM05D003448 ORTHO05D004028 6.2e-17 91.7 165 41.8
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 1.8e-16 90.1 165 37.6
AT3G11810 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 2.4e-16 89.7 179 35.2
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 3.1e-16 89.4 177 39.0
Lsat_1_v5_gn_8_49220 Lactuca sativa HOM05D003448 ORTHO05D004028 3.1e-16 89.4 192 40.1
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 3.1e-16 89.4 194 36.1
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 3.1e-16 89.4 186 39.2
Glyma.07G227750 Glycine max HOM05D003448 ORTHO05D004028 5.3e-16 88.6 148 42.6
AUR62032847 Chenopodium quinoa HOM05D003448 ORTHO05D004028 9.0e-16 87.8 165 40.0
AL5G13040 Arabidopsis lyrata HOM05D003448 ORTHO05D004028 2.0e-15 86.7 192 36.5
Lj4g0008688 Lotus japonicus HOM05D003448 ORTHO05D004028 2.0e-15 86.7 184 38.6
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 2.6e-15 86.3 195 40.0
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 3.4e-15 85.9 196 34.7
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 3.4e-15 85.9 154 39.6
HanXRQChr12g0362021 Helianthus annuus HOM05D003448 ORTHO05D004028 5.8e-15 85.1 81 58.0
AT2G03330 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 7.6e-15 84.7 179 34.6
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 7.6e-15 84.7 197 34.5
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 1.3e-14 84.0 154 37.7
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 1.7e-14 83.6 171 38.6
Phvul.002G103700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 2.9e-14 82.8 147 40.1
Lalb_Chr05g0220171 Lupinus albus HOM05D003448 ORTHO05D004028 3.8e-14 82.4 177 36.2
Ah.03g134640 Amaranthus hybridus HOM05D003448 ORTHO05D004028 4.9e-14 82.0 166 41.6
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 6.4e-14 81.6 189 34.4
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 6.4e-14 81.6 188 34.6
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 6.4e-14 81.6 188 34.6
C09p31190 Brassica napus HOM05D003448 ORTHO05D004028 8.4e-14 81.3 173 37.0
ATR0730G136 Amborella trichopoda HOM05D003448 ORTHO05D004028 1.1e-13 80.9 179 36.3
C02p51340 Brassica napus HOM05D003448 ORTHO05D004028 2.4e-13 79.7 136 40.4
CARHR145690 Cardamine hirsuta HOM05D003448 ORTHO05D004028 2.4e-13 79.7 132 40.9
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 2.4e-13 79.7 190 38.4
C02p51370 Brassica napus HOM05D003448 ORTHO05D004028 3.2e-13 79.3 136 40.4
BcaC03g17206 Brassica carinata HOM05D003448 ORTHO05D004028 9.3e-13 77.8 147 38.8
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 9.3e-13 77.8 187 38.5
BcaC03g17209 Brassica carinata HOM05D003448 ORTHO05D004028 1.2e-12 77.4 147 38.8
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 1.2e-12 77.4 158 38.0
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 2.7e-12 76.3 186 38.2
arahy.Tifrunner.gnm1.ann1.57BZA4 Arachis hypogaea HOM05D003448 ORTHO05D004028 6.0e-12 75.1 143 35.7
Gohir.A13G078300 Gossypium hirsutum HOM05D003448 ORTHO05D004028 6.0e-12 75.1 180 36.1
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 3.0e-11 72.8 190 36.8
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.5e-10 70.5 182 35.2
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 1.9e-10 70.1 186 35.5
SEGI_06194 Sequoiadendron giganteum HOM05D003448 ORTHO05D004028 1.9e-10 70.1 186 29.6
SalBow2G2694 Salvia bowleyana HOM05D003448 ORTHO05D004028 5.6e-10 68.6 189 37.0
CSS0034838 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 7.4e-10 68.2 142 35.9
COL.COLO4_27963 Corchorus olitorius HOM05D003448 ORTHO05D004028 9.6e-10 67.8 180 35.0
ECA233G3599 Erigeron canadensis HOM05D003448 ORTHO05D004028 1.3e-09 67.4 65 53.8
Nitab4.5_0005448g0040 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.6e-09 67.0 113 37.2
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.1e-09 66.6 186 36.6
Zm00001eb408540 Zea mays HOM05D003448 ORTHO05D004028 2.1e-09 66.6 160 37.5
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.8e-09 66.2 191 35.6
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 2.8e-09 66.2 191 35.6
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 3.7e-09 65.9 186 36.0
FAN07G2405 Fragaria x ananassa HOM05D003448 ORTHO05D004028 6.2e-09 65.1 114 40.4
Sopen05g007650 Solanum pennellii HOM05D003448 ORTHO05D004028 1.4e-08 63.9 163 35.0
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.1e-08 62.8 153 34.6
Os12g0257500 Oryza sativa ssp. japonica HOM05D003448 ORTHO05D004028 3.1e-08 62.8 156 35.9
FAN22G1572 Fragaria x ananassa HOM05D003448 ORTHO05D004028 4.0e-08 62.4 108 42.6
Glyma.20G030700 Glycine max HOM05D003448 ORTHO05D004028 5.3e-08 62.0 154 37.0
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 6.9e-08 61.6 192 35.4
Hma1.2p1_0261F.1_g104800 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 6.9e-08 61.6 64 51.6
TAR629G0321 Trochodendron aralioides HOM05D003448 ORTHO05D004028 6.9e-08 61.6 107 41.1
THA.LOC104824071 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 9.0e-08 61.2 203 31.5
SGA_v2.0_scaffold36G14418 Striga asiatica HOM05D003448 ORTHO05D004028 1.2e-07 60.8 164 37.2
Eucgr.G02473 Eucalyptus grandis HOM05D003448 ORTHO05D004028 1.5e-07 60.5 70 51.4
FAN17G1640 Fragaria x ananassa HOM05D003448 ORTHO05D004028 1.5e-07 60.5 108 41.7
FAN12G3596 Fragaria x ananassa HOM05D003448 ORTHO05D004028 2.0e-07 60.1 65 53.8
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.0e-07 60.1 154 32.5
Nitab4.5_0014231g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.6e-07 59.7 180 33.3
Nitab4.5_0000391g0100 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.4e-07 59.3 131 34.4
COL.COLO4_27962 Corchorus olitorius HOM05D003448 ORTHO05D004028 4.5e-07 58.9 178 33.1
Migut.L01240 Erythranthe guttata HOM05D003448 ORTHO05D004028 4.5e-07 58.9 187 32.1
PGSC0003DMG400046292 Solanum tuberosum HOM05D003448 ORTHO05D004028 5.8e-07 58.5 184 33.2
Psat7g135520 Pisum sativum HOM05D003448 ORTHO05D004028 7.6e-07 58.2 148 38.5
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 9.9e-07 57.8 148 33.1
SalBow1G1885 Salvia bowleyana HOM05D003448 ORTHO05D004028 9.9e-07 57.8 113 37.2
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 2.2e-06 56.6 112 42.0
Peaxi162Scf00222g00125 Petunia axillaris HOM05D003448 ORTHO05D004028 2.2e-06 56.6 154 32.5
TAR371G0373 Trochodendron aralioides HOM05D003448 ORTHO05D004028 2.2e-06 56.6 101 39.6
Gohir.A03G102650 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.9e-06 56.2 58 51.7
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.9e-06 56.2 144 33.3
Peaxi162Scf00187g00126 Petunia axillaris HOM05D003448 ORTHO05D004028 2.9e-06 56.2 129 33.3
COL.COLO4_27958 Corchorus olitorius HOM05D003448 ORTHO05D004028 4.9e-06 55.5 53 54.7
Medtr4g082355 Medicago truncatula HOM05D003448 ORTHO05D004028 4.9e-06 55.5 129 35.7
Nitab4.5_0000391g0110 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.9e-06 55.5 144 33.3
Phvul.002G168700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 8.4e-06 54.7 189 32.8


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