Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0361771 Helianthus annuus HOM05D003448 ORTHO05D004028 3.8e-163 578.2 308 100.0
Lsat_1_v5_gn_8_49260 Lactuca sativa HOM05D003448 ORTHO05D004028 1.8e-83 313.5 318 55.7
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 1.4e-75 287.3 323 55.4
Lsat_1_v5_gn_8_49200 Lactuca sativa HOM05D003448 ORTHO05D004028 3.7e-65 252.7 314 49.7
Lsat_1_v5_gn_8_49240 Lactuca sativa HOM05D003448 ORTHO05D004028 6.3e-65 251.9 316 49.1
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 3.1e-64 249.6 327 49.5
HanXRQChr12g0362021 Helianthus annuus HOM05D003448 ORTHO05D004028 5.3e-64 248.8 215 66.0
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 9.4e-61 238.0 330 46.1
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 1.7e-57 227.3 325 45.8
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.2e-55 221.1 322 45.7
HanXRQChr12g0379221 Helianthus annuus HOM05D003448 ORTHO05D004028 2.6e-55 219.9 329 45.3
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 4.2e-53 212.6 340 42.9
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 1.0e-51 208.0 340 42.9
HanXRQChr12g0361861 Helianthus annuus HOM05D003448 ORTHO05D004028 6.7e-51 205.3 164 70.7
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.3e-49 201.1 338 42.0
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 6.3e-49 198.7 328 42.4
Lsat_1_v5_gn_8_49220 Lactuca sativa HOM05D003448 ORTHO05D004028 1.8e-48 197.2 333 41.7
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 2.4e-48 196.8 326 42.3
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 3.1e-48 196.4 327 41.6
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 7.0e-48 195.3 319 44.5
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 2.2e-46 190.3 325 40.9
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 3.8e-46 189.5 322 42.5
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 1.5e-45 187.6 322 40.4
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 5.5e-45 185.7 326 40.2
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 8.0e-44 181.8 344 39.8
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 4.0e-43 179.5 337 39.5
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 6.8e-43 178.7 322 40.7
Actinidia12305 Actinidia chinensis HOM05D003448 ORTHO05D004028 1.5e-42 177.6 308 40.9
HanXRQChr12g0361791 Helianthus annuus HOM05D003448 ORTHO05D004028 5.7e-42 175.6 181 58.6
Lj6P783T35 Lonicera japonica HOM05D003448 ORTHO05D004028 1.3e-41 174.5 237 48.9
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 1.7e-41 174.1 318 39.6
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 2.8e-41 173.3 313 39.6
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 2.8e-41 173.3 313 39.6
DCAR_023813 Daucus carota HOM05D003448 ORTHO05D004028 6.3e-41 172.2 331 39.9
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 2.4e-40 170.2 316 40.2
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 5.9e-39 165.6 334 38.9
Aqoxy3G03502 Aquilegia oxysepala HOM05D003448 ORTHO05D004028 1.3e-38 164.5 323 39.9
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 1.7e-38 164.1 338 37.6
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 2.3e-38 163.7 326 38.3
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 2.3e-38 163.7 321 38.0
CSS0006655 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 8.6e-38 161.8 326 39.0
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.9e-37 160.6 320 38.8
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 2.5e-37 160.2 334 34.7
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 3.3e-37 159.8 334 39.8
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 4.2e-37 159.5 320 35.6
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 5.5e-37 159.1 320 38.4
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 1.2e-36 157.9 330 37.9
AUR62032847 Chenopodium quinoa HOM05D003448 ORTHO05D004028 1.6e-36 157.5 339 37.5
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 1.6e-36 157.5 306 40.5
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 2.1e-36 157.1 326 39.0
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 2.8e-36 156.8 326 37.4
Eucgr.G02471 Eucalyptus grandis HOM05D003448 ORTHO05D004028 4.7e-36 156.0 337 39.2
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 8.0e-36 155.2 333 39.9
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 5.2e-35 152.5 322 36.6
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 6.8e-35 152.1 330 35.8
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 2.0e-34 150.6 324 37.7
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 3.4e-34 149.8 333 36.3
Aa31LG2G7210 Aethionema arabicum HOM05D003448 ORTHO05D004028 4.4e-34 149.4 334 36.8
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 4.4e-34 149.4 307 37.5
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 5.7e-34 149.1 324 37.7
Thhalv10005445m.g Eutrema salsugineum HOM05D003448 ORTHO05D004028 9.8e-34 148.3 335 37.0
AL5G13040 Arabidopsis lyrata HOM05D003448 ORTHO05D004028 4.9e-33 146.0 322 37.3
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 4.9e-33 146.0 334 37.1
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 8.3e-33 145.2 334 35.9
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 1.1e-32 144.8 335 36.7
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 1.1e-32 144.8 325 36.6
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 2.4e-32 143.7 344 36.0
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 2.0e-31 140.6 323 37.8
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 2.7e-31 140.2 327 35.8
Ca_25944_v3 Cicer arietinum L. HOM05D003448 ORTHO05D004028 2.9e-30 136.7 329 36.5
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 3.9e-30 136.3 339 36.9
Carub.0005s0231 Capsella rubella HOM05D003448 ORTHO05D004028 6.6e-30 135.6 329 35.3
AT3G11810 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 1.5e-29 134.4 329 36.5
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.9e-29 134.0 318 38.1
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 4.3e-29 132.9 320 37.8
Lj4g0008688 Lotus japonicus HOM05D003448 ORTHO05D004028 5.6e-29 132.5 304 37.5
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 5.6e-29 132.5 275 35.6
Phvul.002G103700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 7.3e-29 132.1 321 35.2
BcaC04g21492 Brassica carinata HOM05D003448 ORTHO05D004028 1.2e-28 131.3 330 35.2
BolC9t55975H Brassica oleracea HOM05D003448 ORTHO05D004028 1.2e-28 131.3 330 35.2
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 2.1e-28 130.6 323 35.0
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.8e-28 130.2 312 34.0
Ah.03g134640 Amaranthus hybridus HOM05D003448 ORTHO05D004028 3.6e-28 129.8 340 35.6
Lalb_Chr05g0220171 Lupinus albus HOM05D003448 ORTHO05D004028 8.0e-28 128.6 335 35.2
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 1.8e-27 127.5 321 34.6
Gohir.A13G078300 Gossypium hirsutum HOM05D003448 ORTHO05D004028 8.9e-27 125.2 312 37.5
Glyma.07G227750 Glycine max HOM05D003448 ORTHO05D004028 4.4e-26 122.9 329 34.7
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.4e-26 122.9 312 34.0
ECA246G1613 Erigeron canadensis HOM05D003448 ORTHO05D004028 9.8e-26 121.7 137 56.2
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 9.8e-26 121.7 311 34.4
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.9e-25 120.2 318 35.8
Haze_11952 Corylus avellana HOM05D003448 ORTHO05D004028 3.7e-25 119.8 167 44.9
C09p31190 Brassica napus HOM05D003448 ORTHO05D004028 4.9e-25 119.4 322 34.2
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 4.9e-25 119.4 314 34.7
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 8.3e-25 118.6 314 34.7
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.4e-24 117.9 318 35.2
CARHR145690 Cardamine hirsuta HOM05D003448 ORTHO05D004028 1.9e-24 117.5 330 33.3
COL.COLO4_27963 Corchorus olitorius HOM05D003448 ORTHO05D004028 2.4e-24 117.1 310 34.8
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.4e-24 117.1 314 35.0
arahy.Tifrunner.gnm1.ann1.57BZA4 Arachis hypogaea HOM05D003448 ORTHO05D004028 4.1e-24 116.3 335 32.5
ATR0730G136 Amborella trichopoda HOM05D003448 ORTHO05D004028 5.4e-24 115.9 335 31.6
Cc11_g07300 Coffea canephora HOM05D003448 ORTHO05D004028 9.2e-24 115.2 280 35.7
Peaxi162Scf00222g00119 Petunia axillaris HOM05D003448 ORTHO05D004028 1.2e-23 114.8 279 32.6
SGA_v2.0_scaffold36G14418 Striga asiatica HOM05D003448 ORTHO05D004028 2.0e-23 114.0 298 35.6
Glyma.20G030600 Glycine max HOM05D003448 ORTHO05D004028 3.5e-23 113.2 324 33.3
Phvul.002G168700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 3.5e-23 113.2 327 33.9
TAR371G0373 Trochodendron aralioides HOM05D003448 ORTHO05D004028 3.5e-23 113.2 235 38.3
Glyma.20G030700 Glycine max HOM05D003448 ORTHO05D004028 1.3e-22 111.3 299 32.4
Peaxi162Scf00187g00126 Petunia axillaris HOM05D003448 ORTHO05D004028 1.3e-22 111.3 302 33.1
BcaC03g17206 Brassica carinata HOM05D003448 ORTHO05D004028 1.7e-22 110.9 311 35.0
Nitab4.5_0000391g0110 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.3e-22 110.5 314 31.5
THA.LOC104824071 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 1.5e-21 107.8 326 34.4
AUR62005855 Chenopodium quinoa HOM05D003448 ORTHO05D004028 1.9e-21 107.5 218 39.9
Peaxi162Scf00222g00125 Petunia axillaris HOM05D003448 ORTHO05D004028 4.3e-21 106.3 304 31.6
PGSC0003DMG400046292 Solanum tuberosum HOM05D003448 ORTHO05D004028 9.5e-21 105.1 303 30.7
Sopen05g007650 Solanum pennellii HOM05D003448 ORTHO05D004028 2.1e-20 104.0 242 33.5
Medtr4g082355 Medicago truncatula HOM05D003448 ORTHO05D004028 3.6e-20 103.2 291 36.4
CANSAT64G0892 Cannabis sativa HOM05D003448 ORTHO05D004028 4.7e-20 102.8 348 31.0
Migut.L01240 Erythranthe guttata HOM05D003448 ORTHO05D004028 6.2e-20 102.4 304 32.6
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 8.0e-20 102.1 297 31.0
Sopen05g007670 Solanum pennellii HOM05D003448 ORTHO05D004028 1.1e-19 101.7 319 30.1
CSS0034838 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.4e-19 101.3 265 32.8
VMungo0251G3339 Vigna mungo HOM05D003448 ORTHO05D004028 2.3e-19 100.5 310 33.5
Psat7g135520 Pisum sativum HOM05D003448 ORTHO05D004028 4.0e-19 99.8 269 36.1
Psat7g153440 Pisum sativum HOM05D003448 ORTHO05D004028 4.0e-19 99.8 269 37.9
Sopen05g007690 Solanum pennellii HOM05D003448 ORTHO05D004028 1.2e-18 98.2 300 32.3
COL.COLO4_27962 Corchorus olitorius HOM05D003448 ORTHO05D004028 2.0e-18 97.4 327 30.9
Eucgr.G02473 Eucalyptus grandis HOM05D003448 ORTHO05D004028 2.6e-18 97.1 248 35.5
SalBow2G2694 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.6e-18 97.1 311 31.5
VMungo0251G1914 Vigna mungo HOM05D003448 ORTHO05D004028 3.4e-18 96.7 311 31.8
BcaC03g17209 Brassica carinata HOM05D003448 ORTHO05D004028 9.8e-18 95.1 254 35.0
Medtr4g082360 Medicago truncatula HOM05D003448 ORTHO05D004028 9.8e-18 95.1 281 34.2
Sopen05g007660 Solanum pennellii HOM05D003448 ORTHO05D004028 9.8e-18 95.1 318 28.9
AT2G03330 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 2.2e-17 94.0 191 37.7
TPR.G36791 Trifolium pratense HOM05D003448 ORTHO05D004028 2.9e-17 93.6 278 35.3
Nitab4.5_0000014g0220 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.9e-17 92.8 220 36.8
Solyc05g012860.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 4.9e-17 92.8 217 35.0
SalBow2G2818 Salvia bowleyana HOM05D003448 ORTHO05D004028 6.4e-17 92.4 286 32.9
SEGI_06194 Sequoiadendron giganteum HOM05D003448 ORTHO05D004028 6.4e-17 92.4 334 30.2
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.1e-16 91.7 208 34.1
PGSC0003DMG400028404 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.1e-16 91.7 305 30.5
Migut.L01238 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.4e-16 91.3 292 33.2
SalBow2G2515 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.9e-16 90.9 286 32.2
TPR.G11298 Trifolium pratense HOM05D003448 ORTHO05D004028 7.0e-16 89.0 281 35.2
Solyc04g005530.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.6e-15 87.8 182 39.0
C02p51340 Brassica napus HOM05D003448 ORTHO05D004028 3.5e-15 86.7 137 43.8
C02p51370 Brassica napus HOM05D003448 ORTHO05D004028 3.5e-15 86.7 137 43.8
Migut.L01237 Erythranthe guttata HOM05D003448 ORTHO05D004028 3.5e-15 86.7 283 31.8
TPR.G38090 Trifolium pratense HOM05D003448 ORTHO05D004028 6.0e-15 85.9 277 35.0
ECA233G3599 Erigeron canadensis HOM05D003448 ORTHO05D004028 7.8e-15 85.5 65 66.2
Medtr4g082365 Medicago truncatula HOM05D003448 ORTHO05D004028 1.0e-14 85.1 256 32.8
Solyc05g012810.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.0e-14 85.1 158 36.7
FAN22G1572 Fragaria x ananassa HOM05D003448 ORTHO05D004028 6.6e-14 82.4 105 49.5
FAN07G2405 Fragaria x ananassa HOM05D003448 ORTHO05D004028 1.9e-13 80.9 105 49.5
FAN17G1640 Fragaria x ananassa HOM05D003448 ORTHO05D004028 2.5e-13 80.5 105 48.6
MD16G1066700 Malus domestica HOM05D003448 ORTHO05D004028 3.6e-12 76.6 171 35.7
Hma1.2p1_0261F.1_g104800 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 1.4e-11 74.7 64 59.4
Lalb_Chr09g0329141 Lupinus albus HOM05D003448 ORTHO05D004028 1.8e-11 74.3 199 33.7
FAN12G3596 Fragaria x ananassa HOM05D003448 ORTHO05D004028 3.1e-11 73.6 102 47.1
Solyc05g012850.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 4.0e-11 73.2 219 28.3
Nitab4.5_0014231g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.2e-10 71.6 199 32.2
Migut.L01239 Erythranthe guttata HOM05D003448 ORTHO05D004028 2.0e-10 70.9 307 30.3
CANSAT64G2624 Cannabis sativa HOM05D003448 ORTHO05D004028 2.2e-09 67.4 328 31.1
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.2e-09 67.4 163 33.7
Nitab4.5_0005448g0040 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.9e-09 66.2 112 38.4
TAR629G0321 Trochodendron aralioides HOM05D003448 ORTHO05D004028 4.9e-09 66.2 104 42.3
Lalb_Chr05g0220181 Lupinus albus HOM05D003448 ORTHO05D004028 2.4e-08 63.9 280 27.9
SalBow1G1885 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.4e-08 63.9 113 38.9
Gohir.A03G102650 Gossypium hirsutum HOM05D003448 ORTHO05D004028 5.4e-08 62.8 98 40.8
COL.COLO4_27958 Corchorus olitorius HOM05D003448 ORTHO05D004028 9.2e-08 62.0 69 53.6
SEGI_11541 Sequoiadendron giganteum HOM05D000043 ORTHO05D001371 1.2e-07 61.6 154 34.4
Nitab4.5_0000391g0100 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.6e-07 59.7 131 35.9
HanXRQChr12g0381561 Helianthus annuus HOM05D001062 ORTHO05D000884 7.8e-07 58.9 292 28.4
Zm00001eb408540 Zea mays HOM05D003448 ORTHO05D004028 3.9e-06 56.6 229 31.0
unitig_699.g19913 Utricularia gibba HOM05D003448 ORTHO05D004028 6.6e-06 55.8 138 29.7


User provided reference genes

Program Settings