Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 1.0e-120 436.8 227 100.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 2.1e-57 226.5 153 82.4
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 5.1e-56 221.9 151 81.5
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.7e-51 206.8 153 75.2
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 3.5e-44 182.6 153 68.0
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 3.8e-43 179.1 153 66.7
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.1e-42 177.6 165 62.4
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 4.0e-40 169.1 151 66.2
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 4.0e-40 169.1 149 65.8
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 1.7e-38 163.7 153 63.4
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 8.2e-38 161.4 151 63.6
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.4e-37 160.6 155 60.6
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.8e-37 160.2 155 60.0
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 7.0e-37 158.3 152 60.5
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.2e-36 157.5 151 62.9
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 5.9e-36 155.2 154 62.3
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 7.7e-36 154.8 152 63.2
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 7.7e-36 154.8 155 61.9
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.7e-35 153.7 123 70.7
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.8e-35 152.5 151 60.9
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.1e-34 151.0 117 71.8
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.9e-34 150.2 123 69.1
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 9.4e-34 147.9 154 57.8
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 2.1e-33 146.7 122 69.7
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.6e-33 146.0 147 61.9
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.6e-33 146.0 120 68.3
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.4e-32 144.1 147 61.2
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.4e-32 144.1 131 65.6
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.8e-32 143.7 147 61.2
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.3e-32 143.3 152 59.9
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 4.0e-32 142.5 158 60.8
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.0e-32 142.5 147 61.2
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.0e-32 142.5 147 61.2
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 5.2e-32 142.1 149 60.4
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 8.8e-32 141.4 133 63.2
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 8.8e-32 141.4 149 59.1
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.2e-31 141.0 136 61.8
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.5e-31 140.6 149 59.7
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.6e-31 139.8 159 59.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 2.6e-31 139.8 145 60.0
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 4.4e-31 139.0 150 60.0
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 7.5e-31 138.3 145 60.7
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 7.5e-31 138.3 108 70.4
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 7.5e-31 138.3 139 61.9
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.3e-30 137.5 133 63.9
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.2e-30 136.7 134 63.4
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 3.7e-30 136.0 149 57.0
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 3.7e-30 136.0 133 63.2
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.7e-30 136.0 147 58.5
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 3.7e-30 136.0 116 70.7
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 4.8e-30 135.6 108 70.4
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 4.8e-30 135.6 136 60.3
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 6.3e-30 135.2 108 69.4
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 6.3e-30 135.2 131 64.9
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 6.3e-30 135.2 152 59.9
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 8.3e-30 134.8 144 57.6
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 8.3e-30 134.8 133 61.7
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.4e-29 134.0 141 58.9
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.4e-29 134.0 141 58.9
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.4e-29 134.0 151 58.3
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.8e-29 133.7 127 64.6
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.8e-29 133.7 133 63.2
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.1e-29 132.9 148 56.1
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 3.1e-29 132.9 155 55.5
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 5.4e-29 132.1 113 69.0
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 5.4e-29 132.1 133 59.4
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 5.4e-29 132.1 133 59.4
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 5.4e-29 132.1 120 64.2
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 5.4e-29 132.1 151 57.6
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 7.0e-29 131.7 154 55.8
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 7.0e-29 131.7 129 65.9
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 9.1e-29 131.3 133 59.4
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 9.1e-29 131.3 125 63.2
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.2e-28 131.0 150 58.7
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.2e-28 131.0 115 67.0
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.6e-28 130.6 131 61.1
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 2.0e-28 130.2 129 60.5
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.0e-28 130.2 110 70.9
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 2.0e-28 130.2 126 65.9
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 2.7e-28 129.8 132 59.8
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 2.7e-28 129.8 132 59.8
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 2.7e-28 129.8 153 56.9
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 3.5e-28 129.4 126 62.7
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 3.5e-28 129.4 108 69.4
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.5e-28 129.0 112 67.0
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 5.9e-28 128.6 149 55.7
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 7.7e-28 128.3 107 70.1
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.0e-27 127.9 112 67.0
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 1.0e-27 127.9 155 55.5
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 1.7e-27 127.1 148 54.1
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.7e-27 127.1 115 63.5
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 2.2e-27 126.7 147 57.8
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.2e-27 126.7 133 59.4
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.9e-27 126.3 147 57.8
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.8e-27 125.9 155 52.9
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 5.0e-27 125.6 155 53.5
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 5.0e-27 125.6 132 59.1
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 6.5e-27 125.2 148 54.1
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.5e-26 124.0 123 61.0
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 3.2e-26 122.9 94 71.3
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 9.4e-26 121.3 123 62.6
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 2.7e-25 119.8 91 72.5
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 4.0e-24 115.9 127 54.3
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.5e-23 114.0 129 59.7
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.4e-23 112.8 131 57.3
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.1e-21 107.8 66 87.9
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.1e-21 107.8 66 87.9
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 4.1e-21 105.9 93 66.7
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 5.4e-21 105.5 220 39.1
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 5.4e-21 105.5 70 78.6
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 3.5e-20 102.8 117 59.8
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 7.7e-20 101.7 117 55.6
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.7e-19 100.5 91 67.0
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 6.6e-19 98.6 86 61.6
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 4.3e-18 95.9 85 63.5
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 8.0e-17 91.7 126 47.6
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.2e-15 87.8 125 50.4
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.5e-15 87.4 148 43.2
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.0e-15 87.0 107 51.4
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 5.9e-12 75.5 61 63.9
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 5.6e-10 68.9 73 53.4
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 3.6e-09 66.2 101 46.5
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 2.6e-07 60.1 61 50.8
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 3.7e-06 56.2 73 43.8


User provided reference genes

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