Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0357031 Helianthus annuus HOM05D003638 ORTHO05D003202 6.0e-67 257.3 123 100.0
ECA234G1438 Erigeron canadensis HOM05D003638 ORTHO05D003202 7.4e-25 117.5 102 64.7
HanXRQChr05g0137971 Helianthus annuus HOM05D003638 ORTHO05D003202 9.3e-20 100.5 98 53.1
HanXRQChr05g0137981 Helianthus annuus HOM05D003638 ORTHO05D003202 9.3e-20 100.5 125 46.4
Lsat_1_v5_gn_8_63100 Lactuca sativa HOM05D003638 ORTHO05D003202 1.6e-19 99.8 97 54.6
HanXRQChr10g0315321 Helianthus annuus HOM05D003638 ORTHO05D003202 6.1e-19 97.8 97 56.7
ECA236G1572 Erigeron canadensis HOM05D003638 ORTHO05D003202 3.7e-16 88.6 99 54.5
Duzib168G1473 Durio zibethinus HOM05D003638 ORTHO05D003202 1.1e-15 87.0 104 55.8
Thecc.09G141300 Theobroma cacao HOM05D003638 ORTHO05D003202 5.3e-15 84.7 102 52.9
Dinv41427 Davidia involucrata HOM05D003638 ORTHO05D003202 1.5e-14 83.2 136 45.6
GSVIVG01012890001 Vitis vinifera HOM05D003638 ORTHO05D003202 3.4e-14 82.0 104 49.0
CSS0018942 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 5.9e-14 81.3 103 48.5
Dinv42915 Davidia involucrata HOM05D003638 ORTHO05D003202 5.9e-14 81.3 105 50.5
Dinv43185 Davidia involucrata HOM05D003638 ORTHO05D003202 5.9e-14 81.3 105 50.5
CSS0003684 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 7.7e-14 80.9 102 49.0
Nitab4.5_0001021g0070 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.0e-13 80.5 97 51.5
Dinv22136 Davidia involucrata HOM05D003638 ORTHO05D003202 1.3e-13 80.1 105 50.5
Manes.06G041300 Manihot esculenta HOM05D003638 ORTHO05D003202 1.3e-13 80.1 128 46.9
Cc06_g07440 Coffea canephora HOM05D003638 ORTHO05D003202 1.7e-13 79.7 110 44.5
MELO3C004441.2 Cucumis melo HOM05D003638 ORTHO05D003202 1.7e-13 79.7 108 48.1
QL02p091197 Quercus lobata HOM05D003638 ORTHO05D003202 1.7e-13 79.7 108 48.1
Sopen07g003210 Solanum pennellii HOM05D003638 ORTHO05D003202 1.7e-13 79.7 115 47.0
Nitab4.5_0001555g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 2.2e-13 79.3 97 51.5
Solyc07g007160.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 2.2e-13 79.3 115 47.0
Cfa020896 Carpinus fangiana HOM05D003638 ORTHO05D003202 3.8e-13 78.6 137 41.6
Nitab4.5_0007535g0020 Nicotiana tabacum HOM05D003638 ORTHO05D003202 3.8e-13 78.6 97 50.5
CANSAT11G2120 Cannabis sativa HOM05D003638 ORTHO05D003202 5.0e-13 78.2 104 49.0
CsaV3_2G003550 Cucumis sativus L. HOM05D003638 ORTHO05D003202 5.0e-13 78.2 105 48.6
PGSC0003DMG401030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 5.0e-13 78.2 97 52.6
vmacro21884 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 6.5e-13 77.8 111 46.8
TAR626G0601 Trochodendron aralioides HOM05D003638 ORTHO05D003202 1.1e-12 77.0 110 45.5
Duzib187G0526 Durio zibethinus HOM05D003638 ORTHO05D003202 3.2e-12 75.5 104 48.1
CiPaw.16G118000 Carya illinoinensis HOM05D003638 ORTHO05D003202 4.2e-12 75.1 137 40.9
CSS0017335 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 5.5e-12 74.7 103 51.5
Haze_19322 Corylus avellana HOM05D003638 ORTHO05D003202 5.5e-12 74.7 101 48.5
Actinidia04244 Actinidia chinensis HOM05D003638 ORTHO05D003202 7.2e-12 74.3 110 51.8
ClCG02G017240 Citrullus lanatus HOM05D003638 ORTHO05D003202 7.2e-12 74.3 105 49.5
PGSC0003DMG402030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 7.2e-12 74.3 109 45.0
Gohir.A08G095362 Gossypium hirsutum HOM05D003638 ORTHO05D003202 1.2e-11 73.6 140 41.4
Peaxi162Scf00391g00019 Petunia axillaris HOM05D003638 ORTHO05D003202 1.2e-11 73.6 114 42.1
TAR383G0618 Trochodendron aralioides HOM05D003638 ORTHO05D003202 1.2e-11 73.6 112 45.5
Duzib150G0024 Durio zibethinus HOM05D003638 ORTHO05D003202 1.6e-11 73.2 127 48.8
Solyc07g007170.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 2.1e-11 72.8 96 46.9
Nitab4.5_0001751g0040 Nicotiana tabacum HOM05D003638 ORTHO05D003202 2.7e-11 72.4 96 47.9
Sopen06g024020 Solanum pennellii HOM05D003638 ORTHO05D003202 6.1e-11 71.2 96 46.9
Sed0014564 Sechium edule HOM05D003638 ORTHO05D003202 1.0e-10 70.5 105 45.7
Actinidia21912 Actinidia chinensis HOM05D003638 ORTHO05D003202 1.4e-10 70.1 99 49.5
Glyma.09G096300 Glycine max HOM05D003638 ORTHO05D003202 1.8e-10 69.7 137 39.4
CiPaw.15G182800 Carya illinoinensis HOM05D003638 ORTHO05D003202 2.3e-10 69.3 122 41.8
Sopen07g003220 Solanum pennellii HOM05D003638 ORTHO05D003202 3.0e-10 68.9 96 45.8
THA.LOC104808922 Tarenaya hassleriana HOM05D003638 ORTHO05D003202 5.1e-10 68.2 109 46.8
Gohir.D13G208400 Gossypium hirsutum HOM05D003638 ORTHO05D003202 6.7e-10 67.8 102 48.0
Gorai.013G237500 Gossypium raimondii HOM05D003638 ORTHO05D003202 6.7e-10 67.8 103 47.6
Gohir.A13G203100 Gossypium hirsutum HOM05D003638 ORTHO05D003202 8.8e-10 67.4 102 48.0
Cpa.g.sc46.85 Carica papaya HOM05D003638 ORTHO05D003202 1.5e-09 66.6 99 47.5
RcHm_v2.0_Chr2g0086711 Rosa chinensis HOM05D003638 ORTHO05D003202 1.5e-09 66.6 99 49.5
Gohir.A06G050200 Gossypium hirsutum HOM05D003638 ORTHO05D003202 2.0e-09 66.2 99 42.4
TWI63G0270 Tripterygium wilfordii HOM05D003638 ORTHO05D003202 2.0e-09 66.2 97 46.4
Hma1.2p1_0182F.1_g080450 Hydrangea macrophylla HOM05D003638 ORTHO05D003202 2.6e-09 65.9 104 41.3
Hund09319 Selenicereus undatus HOM05D003638 ORTHO05D003202 2.6e-09 65.9 101 43.6
Gorai.010G056400 Gossypium raimondii HOM05D003638 ORTHO05D003202 3.3e-09 65.5 99 42.4
MBI15_g25866_MAGBIO Magnolia biondii HOM05D003638 ORTHO05D003202 3.3e-09 65.5 113 44.2
Oeu051707.1 Olea europaea HOM05D003638 ORTHO05D003202 3.3e-09 65.5 131 39.7
Duzib187G0899 Durio zibethinus HOM05D003638 ORTHO05D003202 4.4e-09 65.1 104 47.1
Lalb_Chr23g0275841 Lupinus albus HOM05D003638 ORTHO05D003202 4.4e-09 65.1 132 36.4
MD02G1013200 Malus domestica HOM05D003638 ORTHO05D003202 4.4e-09 65.1 113 42.5
Oeu055917.1 Olea europaea HOM05D003638 ORTHO05D003202 4.4e-09 65.1 98 44.9
FAN19G2555 Fragaria x ananassa HOM05D003638 ORTHO05D003202 7.4e-09 64.3 104 47.1
FAN28G0590 Fragaria x ananassa HOM05D003638 ORTHO05D003202 7.4e-09 64.3 104 47.1
Glyma.17G105300 Glycine max HOM05D003638 ORTHO05D003202 7.4e-09 64.3 94 45.7
MD15G1160000 Malus domestica HOM05D003638 ORTHO05D003202 7.4e-09 64.3 113 41.6
FvH4_1g01750 Fragaria vesca HOM05D003638 ORTHO05D003202 9.7e-09 63.9 104 47.1
Lj6g0008260 Lotus japonicus HOM05D003638 ORTHO05D003202 9.7e-09 63.9 131 38.2
ClCG06G012030 Citrullus lanatus HOM05D003638 ORTHO05D003202 1.7e-08 63.2 95 43.2
Glyma.15G201800 Glycine max HOM05D003638 ORTHO05D003202 2.8e-08 62.4 137 37.2
Nitab4.5_0005330g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 2.8e-08 62.4 102 42.2
Psat1g023080 Pisum sativum HOM05D003638 ORTHO05D003202 2.8e-08 62.4 107 39.3
Cfa020895 Carpinus fangiana HOM05D003638 ORTHO05D003202 3.7e-08 62.0 104 44.2
Ciclev10009499m.g Citrus clementina HOM05D003638 ORTHO05D003202 4.8e-08 61.6 146 34.2
FAN23G0723 Fragaria x ananassa HOM05D003638 ORTHO05D003202 4.8e-08 61.6 104 47.1
FAN26G1151 Fragaria x ananassa HOM05D003638 ORTHO05D003202 4.8e-08 61.6 104 47.1
Sabra18G0097400 Salix brachista HOM05D003638 ORTHO05D003202 4.8e-08 61.6 112 42.0
Ah.14g078720 Amaranthus hybridus HOM05D003638 ORTHO05D003202 6.3e-08 61.2 106 40.6
Aqoxy7G03537 Aquilegia oxysepala HOM05D003638 ORTHO05D003202 6.3e-08 61.2 140 36.4
Eucgr.C04088 Eucalyptus grandis HOM05D003638 ORTHO05D003202 6.3e-08 61.2 104 43.3
Potri.018G114500 Populus trichocarpa HOM05D003638 ORTHO05D003202 8.2e-08 60.8 114 41.2
Nitab4.5_0001021g0080 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.4e-07 60.1 84 50.0
Rhsim01G0052400 Rhododendron simsii HOM05D003638 ORTHO05D003202 1.4e-07 60.1 111 39.6
Potri.006G190300 Populus trichocarpa HOM05D003638 ORTHO05D003202 1.8e-07 59.7 112 45.5
PGR102G3190 Punica granatum HOM05D003638 ORTHO05D003202 2.4e-07 59.3 102 42.2
Peaxi162Scf00108g00110 Petunia axillaris HOM05D003638 ORTHO05D003202 3.1e-07 58.9 101 45.5
MSTRG.6091 Avicennia marina HOM05D003638 ORTHO05D003202 5.3e-07 58.2 140 35.0
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea HOM05D003638 ORTHO05D003202 7.0e-07 57.8 135 35.6
MSTRG.26318 Avicennia marina HOM05D003638 ORTHO05D003202 1.2e-06 57.0 92 38.0
Haze_19323 Corylus avellana HOM05D003638 ORTHO05D003202 1.2e-06 57.0 120 40.0
PSO017G4113 Papaver somniferum HOM05D003638 ORTHO05D003202 1.2e-06 57.0 97 46.4
Medtr2g461020 Medicago truncatula HOM05D003638 ORTHO05D003202 1.5e-06 56.6 107 40.2
PSO170G3167 Papaver somniferum HOM05D003638 ORTHO05D003202 2.0e-06 56.2 97 46.4
arahy.Tifrunner.gnm1.ann1.ZD4V4J Arachis hypogaea HOM05D003638 ORTHO05D003202 2.6e-06 55.8 135 35.6
DCAR_014923 Daucus carota HOM05D003638 ORTHO05D003202 2.6e-06 55.8 97 46.4
Phvul.009G209800 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 2.6e-06 55.8 99 40.4
TPR.G15775 Trifolium pratense HOM05D003638 ORTHO05D003202 2.6e-06 55.8 105 41.9
VMungo1309G1330 Vigna mungo HOM05D003638 ORTHO05D003202 2.6e-06 55.8 91 42.9
Aa31LG8G12110 Aethionema arabicum HOM05D003638 ORTHO05D003202 3.4e-06 55.5 98 46.9
CsaV3_1G028490 Cucumis sativus L. HOM05D003638 ORTHO05D003202 3.4e-06 55.5 97 40.2
Gohir.D08G106900 Gossypium hirsutum HOM05D003638 ORTHO05D003202 7.7e-06 54.3 137 33.6
Gorai.004G114100 Gossypium raimondii HOM05D003638 ORTHO05D003202 7.7e-06 54.3 137 33.6
Lsat_1_v5_gn_5_94401 Lactuca sativa HOM05D003638 ORTHO05D003202 7.7e-06 54.3 53 52.8


User provided reference genes

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