Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 0.0e+00 2033.8 1015 100.0
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 0.0e+00 1459.9 1013 73.2
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 0.0e+00 1337.4 1032 67.7
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 3.0e-273 945.7 1200 46.2
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.8e-268 928.7 1149 46.9
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.7e-266 922.5 1088 47.9
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 4.8e-263 911.8 1151 45.9
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 1.4e-257 893.6 1137 46.0
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 5.7e-256 888.3 1148 45.8
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 7.5e-248 861.3 1129 44.6
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 1.2e-242 844.0 1146 44.1
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 4.0e-241 839.0 1233 42.7
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 3.1e-238 829.3 1240 41.8
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 5.4e-238 828.6 1139 44.9
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 7.0e-238 828.2 1145 44.5
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 1.6e-237 827.0 1113 43.2
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 2.9e-236 822.8 1108 44.0
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 3.8e-236 822.4 1128 43.8
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 1.5e-235 820.5 1084 44.6
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.6e-234 817.0 1126 43.2
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 1.0e-233 814.3 1144 42.7
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 1.8e-233 813.5 1109 43.6
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 8.9e-233 811.2 1143 43.3
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 8.9e-233 811.2 1144 42.8
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 3.7e-231 805.8 1109 43.1
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 3.7e-231 805.8 1141 42.6
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 5.4e-230 802.0 1116 43.4
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 1.0e-228 797.7 1149 42.3
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.3e-228 796.6 1148 41.6
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 3.9e-228 795.8 1133 42.2
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 3.9e-228 795.8 1118 42.7
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 1.9e-227 793.5 1114 42.5
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.5e-227 793.1 1140 42.5
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 7.3e-227 791.6 1115 42.6
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 1.4e-225 787.3 1116 42.9
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 8.9e-225 784.6 1150 41.0
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 8.3e-223 778.1 1095 42.6
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 1.1e-222 777.7 1124 41.2
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 3.2e-222 776.2 1119 41.2
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 1.6e-221 773.9 1116 42.5
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 1.7e-220 770.4 1135 41.9
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 5.2e-217 758.8 1120 41.0
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 5.8e-216 755.4 1128 40.1
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 6.4e-215 751.9 1130 41.4
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 3.2e-214 749.6 1145 40.3
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 1.3e-212 744.2 1090 41.3
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.7e-212 743.8 1122 40.6
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 2.3e-212 743.4 1163 38.7
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 1.9e-206 723.8 1128 38.5
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 7.3e-203 711.8 1014 42.4
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.4e-201 707.6 1113 40.1
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 6.8e-201 705.3 976 42.9
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 3.5e-197 693.0 970 43.1
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 2.4e-193 680.2 1129 37.4
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 4.4e-192 676.0 1044 41.5
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 5.1e-188 662.5 992 40.3
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 9.6e-187 658.3 833 44.7
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.2e-168 598.2 818 42.5
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 1.7e-167 594.3 764 43.8
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 3.3e-163 580.1 851 42.2
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 1.7e-159 567.8 682 46.2
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 2.1e-157 560.8 871 38.8
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 5.1e-156 556.2 1027 37.4
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 2.0e-152 544.3 1036 35.3
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.3e-148 530.8 1064 36.0
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 8.2e-146 522.3 1074 32.4
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.8e-145 521.2 846 38.8
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 5.9e-144 516.2 862 38.5
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 2.6e-139 500.7 888 37.2
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.5e-134 485.0 1202 29.5
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 1.1e-129 468.8 1067 33.9
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 8.5e-127 459.1 633 41.5
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 2.0e-115 421.4 1131 29.4
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 1.5e-107 395.2 409 53.1
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 2.4e-105 387.9 860 32.9
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 3.9e-95 354.0 304 59.2
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 1.2e-88 332.4 318 54.1
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 1.8e-71 275.4 1026 25.3
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 6.7e-71 273.5 266 57.1
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 9.0e-68 263.1 199 62.8
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.7e-64 251.5 260 54.6
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 1.5e-59 235.7 228 57.9
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.7e-58 232.3 255 51.8
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 1.1e-57 229.6 549 29.7
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 3.0e-55 221.5 319 42.9
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.3e-50 206.1 418 30.9
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 7.4e-46 190.3 214 52.3
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 5.3e-44 184.1 371 33.7
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 5.0e-42 177.6 372 33.6
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 1.3e-37 162.9 162 52.5
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 1.3e-37 162.9 162 52.5
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 3.7e-37 161.4 162 53.7
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 5.5e-33 147.5 392 29.3
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 6.1e-32 144.1 147 54.4
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 2.3e-31 142.1 158 47.5
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 9.7e-30 136.7 220 40.9
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 1.4e-28 132.9 252 31.7
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 1.2e-24 119.8 85 68.2
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 6.1e-24 117.5 117 56.4
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 5.9e-19 100.9 797 19.4
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 5.2e-15 87.8 96 52.1
Lsat_1_v5_gn_4_156541 Lactuca sativa HOM05D007419 ORTHO05D009327 3.6e-08 65.1 53 67.9


User provided reference genes

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