Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0356581 Helianthus annuus HOM05D001116 ORTHO05D222556 1.2e-51 206.1 97 100.0
HanXRQChr14g0451321 Helianthus annuus HOM05D001116 ORTHO05D021127 2.1e-14 82.4 60 63.3
AL3G46550 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 5.0e-08 61.2 64 53.1
HanXRQChr12g0356591 Helianthus annuus HOM05D001116 ORTHO05D021127 1.9e-07 59.3 57 57.9
Lsat_1_v5_gn_2_94540 Lactuca sativa HOM05D001116 ORTHO05D001028 3.6e-06 55.1 31 83.9
Actinidia19559 Actinidia chinensis HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
Actinidia37729 Actinidia chinensis HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
EL10Ac5g11314 Beta vulgaris HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
EL10Ac5g11316 Beta vulgaris HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
Cc07_g01200 Coffea canephora HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
HanXRQChr07g0198041 Helianthus annuus HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
HanXRQChr07g0198051 Helianthus annuus HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
HanXRQChr15g0475751 Helianthus annuus HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
HanXRQChr17g0550801 Helianthus annuus HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
Nn3g16309 Nelumbo nucifera HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
Peaxi162Scf00420g00847 Petunia axillaris HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
Potri.001G322300 Populus trichocarpa HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
Sabra16G0204500 Salix brachista HOM05D001116 ORTHO05D001028 4.6e-06 54.7 31 83.9
Aqoxy5G03184 Aquilegia oxysepala HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
CSS0002674 Camellia sinensis var. sinensis HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
CSS0036799 Camellia sinensis var. sinensis HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
AUR62034775 Chenopodium quinoa HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
Haze_14936 Corylus avellana HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
ECA232G1139 Erigeron canadensis HOM05D001116 ORTHO05D001028 6.1e-06 54.3 56 51.8
Lsat_1_v5_gn_0_12221 Lactuca sativa HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
Lj7C616T12 Lonicera japonica HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
PSO017G5046 Papaver somniferum HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
PSO478G5269 Papaver somniferum HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
RcHm_v2.0_Chr2g0176371 Rosa chinensis HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
Solyc02g094470.3 Solanum lycopersicum HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
Sopen02g039130 Solanum pennellii HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
PGSC0003DMG400020196 Solanum tuberosum HOM05D001116 ORTHO05D001028 6.1e-06 54.3 31 80.6
Atru.chr6.2637 Acer truncatum HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
MSTRG.3046 Avicennia marina HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
AUR62009510 Chenopodium quinoa HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
AUR62034776 Chenopodium quinoa HOM05D001116 ORTHO05D001028 7.9e-06 53.9 56 53.6
COL.COLO4_16701 Corchorus olitorius HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
FvH4_6g54190 Fragaria vesca HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
FAN02G4567 Fragaria x ananassa HOM05D001116 ORTHO05D000003 7.9e-06 53.9 31 80.6
FAN05G3677 Fragaria x ananassa HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
FAN09G2385 Fragaria x ananassa HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
FAN14G5639 Fragaria x ananassa HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
MD09G1004400 Malus domestica HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
MD17G1007900 Malus domestica HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
Manes.14G046100 Manihot esculenta HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 83.9
Nitab4.5_0000519g0280 Nicotiana tabacum HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
Nitab4.5_0002172g0140 Nicotiana tabacum HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
PSO384G0946 Papaver somniferum HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
PSO443G0004 Papaver somniferum HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
PGR142G2003 Punica granatum HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
Rhsim08G0039900 Rhododendron simsii HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
TWI39G0498 Tripterygium wilfordii HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
vmacro18371 Vaccinium macrocarpon HOM05D001116 ORTHO05D001028 7.9e-06 53.9 31 80.6
HPP92_005943 Vanilla planifolia HOM05D001116 ORTHO05D001028 7.9e-06 53.9 41 68.3


User provided reference genes

Program Settings