Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 7.8e-60 233.8 135 100.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.3e-54 216.5 134 91.0
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.7e-36 155.6 122 63.1
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.2e-22 109.4 115 45.2
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.2e-22 109.4 113 46.0
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.4e-21 105.9 115 46.1
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 4.2e-21 105.1 111 45.9
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 7.1e-21 104.4 113 45.1
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 2.1e-20 102.8 113 46.0
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 4.6e-20 101.7 111 44.1
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 4.6e-20 101.7 111 43.2
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 7.9e-20 100.9 111 44.1
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 7.9e-20 100.9 113 45.1
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 7.9e-20 100.9 115 43.5
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 7.9e-20 100.9 111 42.3
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.0e-19 100.5 111 43.2
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.0e-19 100.5 111 42.3
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.0e-19 100.5 111 42.3
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 1.3e-19 100.1 51 78.4
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.8e-19 99.8 111 41.4
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.8e-19 99.8 112 44.6
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.3e-19 99.4 113 45.1
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 3.9e-19 98.6 111 45.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 3.9e-19 98.6 111 43.2
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 5.1e-19 98.2 111 42.3
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 5.1e-19 98.2 111 42.3
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 5.1e-19 98.2 111 42.3
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 6.7e-19 97.8 111 41.4
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 6.7e-19 97.8 115 42.6
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 8.7e-19 97.4 111 41.4
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 8.7e-19 97.4 111 41.4
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 8.7e-19 97.4 111 41.4
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 8.7e-19 97.4 111 43.2
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 8.7e-19 97.4 111 42.3
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.7e-19 97.4 111 42.3
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 8.7e-19 97.4 114 42.1
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.1e-18 97.1 112 43.8
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.1e-18 97.1 111 48.6
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 1.1e-18 97.1 111 42.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.9e-18 96.3 113 44.2
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.5e-18 95.9 111 45.0
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 2.5e-18 95.9 111 42.3
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.5e-18 95.9 111 44.1
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 3.3e-18 95.5 111 41.4
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 4.3e-18 95.1 111 41.4
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 5.6e-18 94.7 111 38.7
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 5.6e-18 94.7 111 38.7
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 7.4e-18 94.4 121 40.5
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 7.4e-18 94.4 111 42.3
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 7.4e-18 94.4 111 41.4
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.3e-17 93.6 110 40.9
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.3e-17 93.6 110 40.9
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.3e-17 93.6 110 40.9
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.6e-17 93.2 116 43.1
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.8e-17 92.4 111 42.3
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 3.6e-17 92.0 108 39.8
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 3.6e-17 92.0 110 41.8
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.6e-17 92.0 111 42.3
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.8e-17 91.7 125 40.0
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 4.8e-17 91.7 113 42.5
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 4.8e-17 91.7 109 37.6
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 4.8e-17 91.7 51 70.6
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 6.2e-17 91.3 109 40.4
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 6.2e-17 91.3 51 68.6
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 6.2e-17 91.3 51 70.6
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 8.1e-17 90.9 111 38.7
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 8.1e-17 90.9 57 64.9
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.1e-16 90.5 54 66.7
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.4e-16 90.1 51 68.6
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.8e-16 89.7 110 40.9
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.8e-16 89.7 111 40.5
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.4e-16 89.4 111 37.8
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 3.1e-16 89.0 111 40.5
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.1e-16 89.0 112 37.5
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 3.1e-16 89.0 118 36.4
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 4.0e-16 88.6 113 40.7
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 4.0e-16 88.6 113 40.7
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 5.3e-16 88.2 112 40.2
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 5.3e-16 88.2 127 38.6
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 5.3e-16 88.2 115 37.4
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.2e-15 87.0 115 40.0
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 1.2e-15 87.0 48 72.9
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.2e-15 87.0 119 38.7
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 2.0e-15 86.3 119 37.8
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.0e-15 86.3 45 68.9
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 2.6e-15 85.9 109 40.4
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.4e-15 85.5 49 73.5
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 3.4e-15 85.5 124 40.3
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 5.8e-15 84.7 119 37.0
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.8e-15 84.7 113 38.1
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 9.9e-15 84.0 49 67.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 9.9e-15 84.0 49 67.3
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-14 83.6 116 37.1
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.3e-14 83.6 116 37.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-14 83.6 51 66.7
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 1.3e-14 83.6 111 37.8
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.9e-14 82.4 50 62.0
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 2.9e-14 82.4 48 62.5
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.1e-13 80.5 111 34.2
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.9e-13 79.7 111 37.8
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 4.2e-13 78.6 110 34.5
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 2.1e-12 76.3 111 34.2
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.3e-11 73.6 111 34.2
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 1.3e-11 73.6 111 33.3
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 3.9e-11 72.0 101 35.6
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 4.3e-10 68.6 51 49.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 7.4e-10 67.8 111 30.6
ECA234G1608 Erigeron canadensis HOM05D000481 ORTHO05D000471 2.4e-08 62.8 43 67.4
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 3.8e-06 55.5 109 29.4


User provided reference genes

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