Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0354001 Helianthus annuus HOM05D002367 ORTHO05D227959 4.2e-69 264.6 137 100.0
HanXRQChr04g0124771 Helianthus annuus HOM05D002367 ORTHO05D002566 1.2e-07 60.5 46 67.4
SGA_v2.0_scaffold105G30326 Striga asiatica HOM05D002367 ORTHO05D002566 1.6e-07 60.1 44 70.5
Actinidia09273 Actinidia chinensis HOM05D002367 ORTHO05D002566 2.7e-07 59.3 44 65.9
ECA236G4941 Erigeron canadensis HOM05D002367 ORTHO05D002566 2.7e-07 59.3 46 65.2
Lsat_1_v5_gn_8_82540 Lactuca sativa HOM05D002367 ORTHO05D002566 3.5e-07 58.9 44 68.2
Lj1g0021568 Lotus japonicus HOM05D002367 ORTHO05D002566 4.5e-07 58.5 44 68.2
vmacro09032 Vaccinium macrocarpon HOM05D002367 ORTHO05D002566 4.5e-07 58.5 44 65.9
SGA_v2.0_scaffold69G23142 Striga asiatica HOM05D001717 ORTHO05D003569 5.9e-07 58.2 44 65.9
MSTRG.6384 Avicennia marina HOM05D002367 ORTHO05D002566 1.0e-06 57.4 44 63.6
CSS0032034 Camellia sinensis var. sinensis HOM05D002367 ORTHO05D002566 1.0e-06 57.4 44 65.9
Migut.J01679 Erythranthe guttata HOM05D002367 ORTHO05D002566 1.0e-06 57.4 44 63.6
arahy.Tifrunner.gnm1.ann1.RJF4AH Arachis hypogaea HOM05D002367 ORTHO05D002566 1.3e-06 57.0 45 62.2
Duzib093G2144 Durio zibethinus HOM05D002367 ORTHO05D002566 1.3e-06 57.0 45 62.2
Glyma.03G129400 Glycine max HOM05D002367 ORTHO05D002566 1.3e-06 57.0 44 65.9
Glyma.19G131600 Glycine max HOM05D002367 ORTHO05D002566 1.3e-06 57.0 44 65.9
Oeu029494.1 Olea europaea HOM05D002367 ORTHO05D002566 1.3e-06 57.0 44 63.6
Psat3g077840 Pisum sativum HOM05D002367 ORTHO05D002566 1.3e-06 57.0 44 63.6
Hma1.2p1_0115F.1_g056010 Hydrangea macrophylla HOM05D002367 ORTHO05D002566 1.7e-06 56.6 44 63.6
TWI53G1562 Tripterygium wilfordii HOM05D002367 ORTHO05D002566 1.7e-06 56.6 44 63.6
COL.COLO4_35827 Corchorus olitorius HOM05D002367 ORTHO05D002566 2.3e-06 56.2 44 63.6
Rhsim04G0110400 Rhododendron simsii HOM05D002367 ORTHO05D002566 2.3e-06 56.2 44 63.6
CiPaw.10G038700 Carya illinoinensis HOM05D002367 ORTHO05D002566 2.9e-06 55.8 44 63.6
Duzib128G1317 Durio zibethinus HOM05D002367 ORTHO05D002566 2.9e-06 55.8 44 61.4
QL07p008440 Quercus lobata HOM05D002367 ORTHO05D002566 2.9e-06 55.8 44 63.6
SGA_v2.0_scaffold8G04553 Striga asiatica HOM05D002367 ORTHO05D002566 2.9e-06 55.8 44 63.6
MELO3C015136.2 Cucumis melo HOM05D002367 ORTHO05D002566 3.8e-06 55.5 44 61.4
CsaV3_1G043230 Cucumis sativus L. HOM05D002367 ORTHO05D002566 3.8e-06 55.5 44 61.4
Migut.D00649 Erythranthe guttata HOM05D002367 ORTHO05D002566 3.8e-06 55.5 44 61.4
Solyc10g079550.3 Solanum lycopersicum HOM05D002367 ORTHO05D002566 3.8e-06 55.5 49 61.2
VMungo1383G3168 Vigna mungo HOM05D002367 ORTHO05D002566 3.8e-06 55.5 44 63.6
ClCG03G012730 Citrullus lanatus HOM05D002367 ORTHO05D002566 5.0e-06 55.1 44 61.4
Haze_19721 Corylus avellana HOM05D002367 ORTHO05D002566 5.0e-06 55.1 59 49.2
Duzib056G0005 Durio zibethinus HOM05D002367 ORTHO05D002566 5.0e-06 55.1 44 61.4
Sc19g0008310 Simmondsia chinensis HOM05D002367 ORTHO05D002566 5.0e-06 55.1 44 61.4
EL10Ac3g07195 Beta vulgaris HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
Cfa016698 Carpinus fangiana HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
AUR62030358 Chenopodium quinoa HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
AUR62040841 Chenopodium quinoa HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
Phvul.008G200000 Phaseolus vulgaris HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
Sabra16G0040500 Salix brachista HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 63.6
Sabra16G0045300 Salix brachista HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 63.6
Sed0021006 Sechium edule HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
Sopen10g030190 Solanum pennellii HOM05D002367 ORTHO05D002566 6.6e-06 54.7 49 61.2
Thecc.05G140200 Theobroma cacao HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
unitig_52.g16898 Utricularia gibba HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
unitig_62.g23899 Utricularia gibba HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
HPP92_012102 Vanilla planifolia HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
VMungo0647G2399 Vigna mungo HOM05D002367 ORTHO05D002566 6.6e-06 54.7 44 61.4
Ah.13g076990 Amaranthus hybridus HOM05D002367 ORTHO05D002566 8.6e-06 54.3 44 61.4
Cpa.g.sc5.202 Carica papaya HOM05D002367 ORTHO05D002566 8.6e-06 54.3 44 61.4
Ciclev10022600m.g Citrus clementina HOM05D002367 ORTHO05D002566 8.6e-06 54.3 44 61.4
HanXRQChr06g0176551 Helianthus annuus HOM05D002367 ORTHO05D002566 8.6e-06 54.3 44 59.1
Hma1.2p1_0470F.1_g159230 Hydrangea macrophylla HOM05D002367 ORTHO05D002566 8.6e-06 54.3 44 59.1
vmacro04018 Vaccinium macrocarpon HOM05D002367 ORTHO05D002566 8.6e-06 54.3 44 61.4


User provided reference genes

Program Settings