Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 6.2e-249 863.6 416 100.0
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 8.5e-182 640.6 436 74.5
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 3.1e-160 568.9 421 64.6
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 4.0e-155 552.0 425 62.4
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 1.5e-154 550.1 345 77.1
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 5.4e-152 541.6 421 61.8
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 3.5e-151 538.9 433 62.1
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 1.0e-150 537.3 432 61.6
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 2.3e-150 536.2 429 62.0
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 2.9e-150 535.8 430 60.5
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 2.9e-150 535.8 429 60.8
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 6.6e-150 534.6 403 62.3
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 2.5e-149 532.7 445 60.0
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 3.3e-149 532.3 433 62.4
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 5.6e-149 531.6 430 60.0
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 9.5e-149 530.8 430 60.0
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 4.7e-148 528.5 432 60.9
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 1.8e-147 526.6 440 61.1
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 2.3e-147 526.2 434 61.1
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 3.0e-147 525.8 354 67.8
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 1.5e-146 523.5 412 63.1
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 1.3e-145 520.4 432 60.4
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 2.2e-145 519.6 404 62.1
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 6.4e-145 518.1 396 62.6
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 1.1e-144 517.3 433 60.5
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 5.4e-144 515.0 435 58.9
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 9.2e-144 514.2 437 58.8
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 1.6e-143 513.5 444 58.8
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 1.6e-143 513.5 402 61.9
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 1.6e-143 513.5 397 63.0
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 2.0e-143 513.1 398 60.3
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 2.0e-143 513.1 411 59.9
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 3.5e-143 512.3 428 59.1
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 4.6e-143 511.9 392 62.8
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 1.0e-142 510.8 515 52.6
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 3.0e-142 509.2 426 59.2
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 3.9e-142 508.8 426 58.2
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 8.6e-142 507.7 432 56.5
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 8.6e-142 507.7 356 66.3
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 1.5e-141 506.9 419 58.0
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 1.9e-141 506.5 430 56.7
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 2.5e-141 506.1 422 57.8
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 2.5e-141 506.1 396 61.4
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 4.3e-141 505.4 354 66.1
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 9.5e-141 504.2 434 57.6
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 1.6e-140 503.4 356 65.7
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 2.8e-140 502.7 426 57.7
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 3.6e-140 502.3 356 66.0
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 3.6e-140 502.3 399 59.4
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.6e-140 502.3 430 58.8
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 3.6e-140 502.3 417 59.7
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 4.7e-140 501.9 403 59.1
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.2e-140 501.5 417 59.7
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 1.0e-139 500.7 439 56.5
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 1.4e-139 500.4 435 57.9
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.3e-139 499.6 386 61.9
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 3.1e-139 499.2 461 55.1
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 4.0e-139 498.8 424 57.8
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 4.0e-139 498.8 354 65.0
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 5.2e-139 498.4 418 58.6
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 5.2e-139 498.4 344 66.6
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 8.9e-139 497.7 425 60.0
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.6e-138 496.1 426 58.7
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 9.8e-138 494.2 431 55.5
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 1.3e-137 493.8 426 58.7
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.7e-137 493.4 411 62.0
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 1.7e-137 493.4 398 59.0
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 2.9e-137 492.7 428 57.0
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 8.3e-137 491.1 426 59.2
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.4e-136 489.6 422 58.5
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 4.1e-136 488.8 428 56.3
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 4.1e-136 488.8 421 57.0
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 4.1e-136 488.8 441 55.6
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 1.6e-135 486.9 423 54.8
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 1.6e-135 486.9 422 55.2
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 1.6e-135 486.9 422 55.2
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 2.0e-135 486.5 321 71.0
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 2.7e-135 486.1 427 56.0
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 1.7e-134 483.4 356 62.9
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 3.0e-134 482.6 356 63.5
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 4.3e-133 478.8 420 57.9
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 1.6e-132 476.9 409 56.2
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 2.1e-132 476.5 373 60.9
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 3.6e-132 475.7 418 56.5
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 1.4e-131 473.8 388 60.1
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 4.0e-131 472.2 398 58.5
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 5.2e-131 471.9 393 59.5
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 5.8e-130 468.4 469 52.0
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 6.4e-129 464.9 321 67.6
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 7.3e-125 451.4 354 59.9
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 3.6e-124 449.1 399 56.6
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 3.6e-124 449.1 431 54.1
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 7.6e-122 441.4 423 53.2
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 8.9e-115 417.9 432 51.6
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 3.0e-102 376.3 331 55.0
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 3.6e-100 369.4 341 55.1
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 7.1e-96 355.1 358 48.0
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 2.3e-94 350.1 252 63.5
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 2.7e-87 326.6 401 43.9
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.5e-85 320.9 331 49.8
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 5.7e-85 318.9 328 49.7
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 1.3e-81 307.8 340 45.9
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.1e-80 304.7 272 56.6
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 6.5e-73 278.9 389 39.6
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 3.6e-71 273.1 424 38.9
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.7e-65 254.2 232 56.0
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 6.1e-55 219.2 344 34.6
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 6.8e-46 189.1 181 52.5
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 8.3e-36 155.6 122 62.3
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 2.7e-34 150.6 118 60.2
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 1.2e-29 135.2 133 52.6
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.5e-13 81.6 50 62.0
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 4.4e-13 80.1 58 62.1
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 1.2e-07 62.0 52 55.8


User provided reference genes

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