Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0352371 Helianthus annuus HOM05D007678 ORTHO05D009658 9.0e-56 219.9 105 100.0
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 8.5e-14 80.5 52 78.8
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 4.4e-10 68.2 52 65.4
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 7.5e-10 67.4 52 69.2
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.1e-08 63.5 52 57.7
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 3.1e-08 62.0 52 55.8
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 7.0e-08 60.8 52 55.8
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 7.0e-08 60.8 69 49.3
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 9.2e-08 60.5 65 46.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.2e-07 60.1 52 57.7
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 2.0e-07 59.3 59 49.2
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 3.5e-07 58.5 52 57.7
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 4.5e-07 58.2 52 53.8
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 4.5e-07 58.2 54 53.7
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 4.5e-07 58.2 50 56.0
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 4.5e-07 58.2 52 51.9
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.5e-07 58.2 52 55.8
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 7.7e-07 57.4 59 49.2
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 7.7e-07 57.4 52 51.9
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.0e-06 57.0 52 50.0
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.0e-06 57.0 52 50.0
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.0e-06 57.0 53 50.9
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 1.7e-06 56.2 52 51.9
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 2.3e-06 55.8 52 51.9
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 2.9e-06 55.5 52 50.0
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 2.9e-06 55.5 52 48.1
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.9e-06 55.5 54 50.0
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 2.9e-06 55.5 52 50.0
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 2.9e-06 55.5 56 48.2
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 3.8e-06 55.1 52 50.0
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 3.8e-06 55.1 52 48.1
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 5.0e-06 54.7 52 50.0
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 5.0e-06 54.7 56 46.4
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 6.6e-06 54.3 56 46.4
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 6.6e-06 54.3 52 51.9
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 6.6e-06 54.3 50 48.0
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 8.6e-06 53.9 50 52.0
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 8.6e-06 53.9 50 48.0


User provided reference genes

Program Settings