Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.1e-206 723.4 479 100.0
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 1.6e-70 271.2 646 44.7
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 2.7e-46 190.7 432 49.8
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 1.4e-34 151.8 542 31.9
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 1.9e-31 141.4 474 36.9
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 1.9e-31 141.4 474 36.3
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 4.3e-28 130.2 435 36.3
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 2.1e-27 127.9 455 36.7
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 1.8e-26 124.8 479 34.9
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 8.9e-26 122.5 359 36.8
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 2.0e-25 121.3 464 33.8
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 5.8e-25 119.8 475 32.2
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 3.8e-24 117.1 550 34.4
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 5.4e-23 113.2 534 36.5
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 7.1e-23 112.8 561 30.7
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 9.3e-23 112.5 482 33.4
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.1e-22 111.3 549 33.9
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 7.8e-22 109.4 484 31.2
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 1.0e-21 109.0 489 31.3
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 1.0e-21 109.0 418 33.5
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 3.9e-21 107.1 549 30.6
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 5.1e-21 106.7 491 31.0
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.5e-20 104.4 558 32.3
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 3.3e-20 104.0 402 32.3
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.3e-20 103.6 547 33.3
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 5.6e-20 103.2 568 30.6
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 9.6e-20 102.4 478 31.0
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 1.3e-19 102.1 500 31.4
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 1.6e-19 101.7 410 33.4
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 1.6e-19 101.7 569 30.1
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 2.1e-19 101.3 483 32.3
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 2.8e-19 100.9 574 29.6
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 5.3e-18 96.7 363 33.9
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 6.9e-18 96.3 661 30.0
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 9.0e-18 95.9 403 30.8
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 9.0e-18 95.9 420 31.4
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 1.2e-17 95.5 655 27.3
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 5.8e-17 93.2 464 30.6
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 5.8e-17 93.2 451 31.7
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 1.3e-16 92.0 550 28.9
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 1.3e-16 92.0 465 30.3
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 1.7e-16 91.7 510 30.0
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 1.7e-16 91.7 396 32.3
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 6.4e-16 89.7 556 30.0
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 3.2e-15 87.4 534 29.2
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 9.3e-15 85.9 452 32.3
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 1.2e-14 85.5 543 30.4
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.2e-14 85.5 518 29.2
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 1.6e-14 85.1 484 27.9
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 2.1e-14 84.7 436 30.0
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 2.7e-14 84.3 482 28.0
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 4.6e-14 83.6 439 31.7
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 6.0e-14 83.2 488 27.0
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 1.0e-13 82.4 485 29.9
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 1.3e-13 82.0 540 28.9
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 1.8e-13 81.6 111 47.7
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 3.0e-13 80.9 416 28.4
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 5.1e-13 80.1 244 34.0
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 1.5e-12 78.6 518 29.7
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.9e-12 78.2 462 30.1
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 4.3e-12 77.0 440 30.9
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 4.3e-12 77.0 488 27.5
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 5.6e-12 76.6 54 75.9
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 1.6e-11 75.1 491 28.1
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 1.4e-10 72.0 333 27.0
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 1.8e-10 71.6 330 29.4
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 3.1e-10 70.9 334 27.8
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 6.9e-10 69.7 484 27.7
ATR0150G007 Amborella trichopoda HOM05D007892 ORTHO05D009211 9.0e-10 69.3 42 83.3
A02p10690 Brassica napus HOM05D012500 ORTHO05D009211 9.0e-10 69.3 353 27.8
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 9.0e-10 69.3 448 28.6
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 1.2e-09 68.9 560 27.7
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 3.4e-09 67.4 60 60.0
BraA02t06132Z Brassica rapa HOM05D012500 ORTHO05D009211 4.5e-09 67.0 353 27.8
PSO541G2379 Papaver somniferum HOM05D056025 ORTHO05D009211 9.9e-09 65.9 130 41.5
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 1.3e-08 65.5 457 28.9
PSO675G5502 Papaver somniferum HOM05D056025 ORTHO05D009211 1.7e-08 65.1 128 40.6
Os07g0107900 Oryza sativa ssp. japonica HOM05D061528 ORTHO05D009211 4.9e-08 63.5 82 47.6
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 6.4e-08 63.2 454 28.9
unitig_37.g12567 Utricularia gibba HOM05D007892 ORTHO05D009211 1.4e-07 62.0 387 27.6
Aa31LG3G10020 Aethionema arabicum HOM05D012500 ORTHO05D009211 3.2e-07 60.8 397 26.4
Nitab4.5_0005017g0030 Nicotiana tabacum HOM05D021138 ORTHO05D009211 7.1e-07 59.7 436 28.7
SGA_v2.0_scaffold73G24235 Striga asiatica HOM05D007892 ORTHO05D009211 1.2e-06 58.9 343 29.4
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 2.7e-06 57.8 552 26.3


User provided reference genes

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