Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0351331 Helianthus annuus HOM05D005527 ORTHO05D006480 1.5e-29 132.1 62 100.0
Lsat_1_v5_gn_3_129561 Lactuca sativa HOM05D005527 ORTHO05D006480 6.8e-11 70.1 56 67.9
HanXRQChr13g0422791 Helianthus annuus HOM05D005527 ORTHO05D006480 1.2e-10 69.3 54 70.4
CSS0037426 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 1.5e-10 68.9 58 62.1
CSS0049638 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 3.4e-10 67.8 56 60.7
ECA240G4071 Erigeron canadensis HOM05D005527 ORTHO05D006480 7.5e-10 66.6 55 63.6
Ca_09921_v3 Cicer arietinum L. HOM05D005527 ORTHO05D006480 1.3e-09 65.9 56 64.3
PSO063G6553 Papaver somniferum HOM05D005527 ORTHO05D006480 1.3e-09 65.9 56 66.1
Phvul.L007001 Phaseolus vulgaris HOM05D005527 ORTHO05D006480 1.3e-09 65.9 56 64.3
Psat6g111240 Pisum sativum HOM05D005527 ORTHO05D006480 1.3e-09 65.9 56 64.3
Cfa016649 Carpinus fangiana HOM05D002184 ORTHO05D006480 1.7e-09 65.5 56 60.7
CiPaw.03G272900 Carya illinoinensis HOM05D005527 ORTHO05D006480 1.7e-09 65.5 56 62.5
Eucgr.D01510 Eucalyptus grandis HOM05D005527 ORTHO05D006480 1.7e-09 65.5 56 60.7
VMungo0720G0088 Vigna mungo HOM05D005527 ORTHO05D006480 1.7e-09 65.5 56 62.5
arahy.Tifrunner.gnm1.ann1.PVA962 Arachis hypogaea HOM05D005527 ORTHO05D006480 2.2e-09 65.1 56 62.5
arahy.Tifrunner.gnm1.ann1.TVCQ13 Arachis hypogaea HOM05D005527 ORTHO05D006480 2.2e-09 65.1 56 62.5
Lalb_Chr21g0311731 Lupinus albus HOM05D005527 ORTHO05D006480 2.2e-09 65.1 56 64.3
Hma1.2p1_1740F.1_g300050 Hydrangea macrophylla HOM05D005527 ORTHO05D006480 2.9e-09 64.7 58 58.6
ClCG08G008500 Citrullus lanatus HOM05D005527 ORTHO05D006480 3.7e-09 64.3 56 64.3
MELO3C019920.2 Cucumis melo HOM05D005527 ORTHO05D006480 3.7e-09 64.3 56 64.3
CsaV3_6G004490 Cucumis sativus L. HOM05D005527 ORTHO05D006480 3.7e-09 64.3 56 64.3
DCAR_025077 Daucus carota HOM05D005527 ORTHO05D006480 3.7e-09 64.3 56 57.1
Actinidia12159 Actinidia chinensis HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 60.7
Cpa.g.sc5.224 Carica papaya HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 62.5
DCAR_025031 Daucus carota HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 57.1
Glyma.10G175000 Glycine max HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 62.5
Lalb_Chr02g0149681 Lupinus albus HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 62.5
Sp6g00070 Schrenkiella parvula HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 64.3
vmacro13481 Vaccinium macrocarpon HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 62.5
HPP92_021019 Vanilla planifolia HOM05D005527 ORTHO05D006480 4.9e-09 63.9 56 58.9
Thhalv10028875m.g Eutrema salsugineum HOM05D005527 ORTHO05D006480 6.4e-09 63.5 56 64.3
Glyma.20G215800 Glycine max HOM05D005527 ORTHO05D006480 6.4e-09 63.5 56 62.5
Lju41A43T28 Lonicera japonica HOM05D005527 ORTHO05D006480 6.4e-09 63.5 56 58.9
Nitab4.5_0001818g0050 Nicotiana tabacum HOM05D005527 ORTHO05D006480 6.4e-09 63.5 56 58.9
Nitab4.5_0002874g0100 Nicotiana tabacum HOM05D005527 ORTHO05D006480 6.4e-09 63.5 56 58.9
Peaxi162Scf00392g00124 Petunia axillaris HOM05D005527 ORTHO05D006480 6.4e-09 63.5 56 58.9
vmacro21047 Vaccinium macrocarpon HOM05D005527 ORTHO05D006480 6.4e-09 63.5 56 58.9
Actinidia40393 Actinidia chinensis HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 60.7
BcaB01g02184 Brassica carinata HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 64.3
BcaB01g02205 Brassica carinata HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 64.3
C09p00040 Brassica napus HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 64.3
BolC9t52939H Brassica oleracea HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 64.3
BraA09t35678Z Brassica rapa HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 64.3
Dinv43641 Davidia involucrata HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 57.1
Lj5g0022618 Lotus japonicus HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 62.5
Medtr1g077430 Medicago truncatula HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 62.5
PGR004G2692 Punica granatum HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 60.7
QL09p042955 Quercus lobata HOM05D005527 ORTHO05D006480 8.3e-09 63.2 56 58.9
Nn6g33862 Nelumbo nucifera HOM05D005527 ORTHO05D006480 1.1e-08 62.8 56 57.1
Rhsim01G0137400 Rhododendron simsii HOM05D005527 ORTHO05D006480 1.1e-08 62.8 41 73.2
EL10Ac7g17978 Beta vulgaris HOM05D005527 ORTHO05D006480 1.4e-08 62.4 56 60.7
Hund14311 Selenicereus undatus HOM05D005527 ORTHO05D006480 1.4e-08 62.4 41 70.7
MD10G1173000 Malus domestica HOM05D005527 ORTHO05D006480 1.9e-08 62.0 58 56.9
Potri.002G140700 Populus trichocarpa HOM05D005527 ORTHO05D006480 1.9e-08 62.0 56 58.9
Potri.014G054400 Populus trichocarpa HOM05D005527 ORTHO05D006480 1.9e-08 62.0 56 58.9
Sabra14G0040300 Salix brachista HOM05D005527 ORTHO05D006480 1.9e-08 62.0 56 58.9
GSVIVG01022807001 Vitis vinifera HOM05D005527 ORTHO05D006480 1.9e-08 62.0 56 58.9
Ah.08g218760 Amaranthus hybridus HOM05D005527 ORTHO05D006480 2.4e-08 61.6 58 55.2
A09p47660 Brassica napus HOM05D005527 ORTHO05D006480 2.4e-08 61.6 56 62.5
MD05G1185000 Malus domestica HOM05D005527 ORTHO05D006480 2.4e-08 61.6 58 55.2
SHI13602 Sapria himalayana HOM05D005527 ORTHO05D006480 2.4e-08 61.6 58 53.4
THA.LOC104814072 Tarenaya hassleriana HOM05D005527 ORTHO05D006480 2.4e-08 61.6 56 60.7
Aa31LG5G80 Aethionema arabicum HOM05D005527 ORTHO05D006480 3.2e-08 61.2 56 62.5
C08p29870 Brassica napus HOM05D005527 ORTHO05D006480 3.2e-08 61.2 56 62.5
TPR.G8872 Trifolium pratense HOM05D005527 ORTHO05D006480 3.2e-08 61.2 56 62.5
TWI59G1399 Tripterygium wilfordii HOM05D005527 ORTHO05D006480 3.2e-08 61.2 56 60.7
AL6G53490 Arabidopsis lyrata HOM05D005527 ORTHO05D006480 4.1e-08 60.8 56 62.5
AT4G00026 Arabidopsis thaliana HOM05D005527 ORTHO05D006480 4.1e-08 60.8 56 62.5
Carub.0006s3720 Capsella rubella HOM05D005527 ORTHO05D006480 4.1e-08 60.8 56 62.5
AUR62001190 Chenopodium quinoa HOM05D005527 ORTHO05D006480 4.1e-08 60.8 56 57.1
AUR62022137 Chenopodium quinoa HOM05D005527 ORTHO05D006480 4.1e-08 60.8 56 57.1
Solyc08g081430.3 Solanum lycopersicum HOM05D005527 ORTHO05D006480 4.1e-08 60.8 39 71.8
Sopen08g029750 Solanum pennellii HOM05D005527 ORTHO05D006480 4.1e-08 60.8 39 71.8
PGSC0003DMG401012327 Solanum tuberosum HOM05D005527 ORTHO05D006480 4.1e-08 60.8 39 71.8
BolC8t50598H Brassica oleracea HOM05D005527 ORTHO05D006480 5.4e-08 60.5 56 62.5
Oeu018737.2 Olea europaea HOM05D005527 ORTHO05D006480 5.4e-08 60.5 41 73.2
Oeu018739.1 Olea europaea HOM05D005527 ORTHO05D006480 5.4e-08 60.5 41 73.2
Prupe.8G211200 Prunus persica HOM05D005527 ORTHO05D006480 5.4e-08 60.5 56 55.4
RcHm_v2.0_Chr6g0285911 Rosa chinensis HOM05D005527 ORTHO05D006480 5.4e-08 60.5 56 57.1
CARHR248050 Cardamine hirsuta HOM05D005527 ORTHO05D006480 7.1e-08 60.1 56 62.5
CDE11G0157 Ceratophyllum demersum HOM05D005527 ORTHO05D006480 7.1e-08 60.1 56 55.4
Ciclev10021461m.g Citrus clementina HOM05D005527 ORTHO05D006480 7.1e-08 60.1 56 60.7
Nn1g00907 Nelumbo nucifera HOM05D005527 ORTHO05D006480 7.1e-08 60.1 56 53.6
Oeu063991.1 Olea europaea HOM05D005527 ORTHO05D006480 7.1e-08 60.1 56 58.9
ATR0767G019 Amborella trichopoda HOM05D005527 ORTHO05D006480 9.2e-08 59.7 41 68.3
BcaC07g39791 Brassica carinata HOM05D005527 ORTHO05D006480 9.2e-08 59.7 54 63.0
SGA_v2.0_scaffold116G32305 Striga asiatica HOM05D005527 ORTHO05D006480 9.2e-08 59.7 43 62.8
Zm00001eb010980 Zea mays HOM05D005527 ORTHO05D006480 9.2e-08 59.7 39 71.8
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 1.2e-07 59.3 56 58.9
FvH4_7g06430 Fragaria vesca HOM05D005527 ORTHO05D006480 1.2e-07 59.3 56 57.1
FAN01G2831 Fragaria x ananassa HOM05D005527 ORTHO05D006480 1.2e-07 59.3 56 57.1
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.2e-07 59.3 56 57.1
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.2e-07 59.3 56 57.1
Rhsim07G0034300 Rhododendron simsii HOM05D005527 ORTHO05D006480 1.2e-07 59.3 56 57.1
SalBow5G2512 Salvia bowleyana HOM05D005527 ORTHO05D006480 1.2e-07 59.3 56 53.6
SalBow5G5418 Salvia bowleyana HOM05D005527 ORTHO05D006480 1.2e-07 59.3 56 53.6
SGA_v2.0_scaffold44G16622 Striga asiatica HOM05D005527 ORTHO05D006480 1.2e-07 59.3 57 56.1
CANSAT01G0875 Cannabis sativa HOM05D005527 ORTHO05D006480 1.6e-07 58.9 41 68.3
CANSAT01G3075 Cannabis sativa HOM05D005527 ORTHO05D006480 1.6e-07 58.9 41 68.3
CAN.G532.17 Capsicum annuum HOM05D005527 ORTHO05D006480 1.6e-07 58.9 39 69.2
Duzib133G0823 Durio zibethinus HOM05D005527 ORTHO05D006480 1.6e-07 58.9 41 70.7
Migut.N01756 Erythranthe guttata HOM05D005527 ORTHO05D006480 1.6e-07 58.9 58 53.4
Sabra02G0109800 Salix brachista HOM05D005527 ORTHO05D006480 1.6e-07 58.9 56 55.4
Sed0026275 Sechium edule HOM05D005527 ORTHO05D006480 1.6e-07 58.9 58 56.9
SEGI_20492 Sequoiadendron giganteum HOM05D005527 ORTHO05D006480 1.6e-07 58.9 56 57.1
Thecc.01G389600 Theobroma cacao HOM05D005527 ORTHO05D006480 1.6e-07 58.9 41 70.7
MSTRG.4922 Avicennia marina HOM05D005527 ORTHO05D006480 2.1e-07 58.5 58 51.7
Duzib138G0956 Durio zibethinus HOM05D005527 ORTHO05D006480 2.1e-07 58.5 41 68.3
Gohir.A08G059500 Gossypium hirsutum HOM05D005527 ORTHO05D006480 2.1e-07 58.5 41 70.7
Gohir.D08G068700 Gossypium hirsutum HOM05D005527 ORTHO05D006480 2.1e-07 58.5 41 70.7
Gorai.004G072000 Gossypium raimondii HOM05D005527 ORTHO05D006480 2.1e-07 58.5 41 70.7
Manes.05G052500 Manihot esculenta HOM05D005527 ORTHO05D006480 2.1e-07 58.5 56 58.9
unitig_0.g2761 Utricularia gibba HOM05D005527 ORTHO05D006480 2.1e-07 58.5 43 65.1
TAR375G0575 Trochodendron aralioides HOM05D005527 ORTHO05D006480 2.7e-07 58.2 56 55.4
BraA09t40222Z Brassica rapa HOM05D005527 ORTHO05D006480 3.5e-07 57.8 56 60.7
FAN03G2170 Fragaria x ananassa HOM05D005527 ORTHO05D006480 4.6e-07 57.4 39 69.2
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 4.6e-07 57.4 39 69.2
Cc00_g20470 Coffea canephora HOM05D005527 ORTHO05D006480 6.0e-07 57.0 55 56.4
Pp3c2_16760 Physcomitrium patens HOM05D005527 ORTHO05D006480 6.0e-07 57.0 55 58.2
SMO201G0136 Selaginella moellendorffii HOM05D005527 ORTHO05D006480 1.3e-06 55.8 55 50.9
AagrBONN_evm.TU.Sc2ySwM_117.1379 Anthoceros agrestis HOM05D005527 ORTHO05D006480 1.7e-06 55.5 55 54.5


User provided reference genes

Program Settings