Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 3.6e-77 291.6 154 100.0
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 5.7e-67 257.7 154 89.6
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 2.8e-66 255.4 152 89.5
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 1.9e-54 216.1 154 77.3
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.3e-54 215.3 129 87.6
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 4.3e-54 214.9 153 79.1
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 9.5e-54 213.8 138 81.9
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-53 213.4 128 85.9
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 2.8e-53 212.2 152 78.3
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 4.7e-53 211.5 157 73.9
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 4.7e-53 211.5 157 73.9
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 6.1e-53 211.1 131 84.0
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 8.0e-53 210.7 128 82.8
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 8.0e-53 210.7 154 76.0
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 1.0e-52 210.3 154 75.3
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.0e-52 210.3 154 72.7
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.4e-52 209.9 154 75.3
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.4e-52 209.9 130 86.9
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.4e-52 209.9 125 86.4
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 1.8e-52 209.5 157 73.9
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.8e-52 209.5 157 74.5
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 2.3e-52 209.1 154 76.6
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 2.3e-52 209.1 123 86.2
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 3.1e-52 208.8 157 73.9
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 3.1e-52 208.8 159 73.6
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 3.1e-52 208.8 154 76.0
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.0e-52 208.4 124 87.1
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 5.2e-52 208.0 127 85.0
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 5.2e-52 208.0 152 73.0
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 5.2e-52 208.0 137 83.2
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 5.2e-52 208.0 153 74.5
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 6.8e-52 207.6 159 74.8
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.2e-51 206.8 159 73.6
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.2e-51 206.8 157 75.2
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.2e-51 206.8 129 84.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 1.2e-51 206.8 154 75.3
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.5e-51 206.5 150 76.7
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 1.5e-51 206.5 154 73.4
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 75.2
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 75.2
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 2.6e-51 205.7 152 77.0
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 2.6e-51 205.7 125 85.6
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 2.6e-51 205.7 133 81.2
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 3.4e-51 205.3 117 88.9
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 4.4e-51 204.9 154 74.0
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 4.4e-51 204.9 149 75.8
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 4.4e-51 204.9 158 73.4
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 4.4e-51 204.9 136 80.9
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 4.4e-51 204.9 133 81.2
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 5.8e-51 204.5 157 73.2
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 5.8e-51 204.5 123 83.7
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 7.5e-51 204.1 132 84.1
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 7.5e-51 204.1 133 82.0
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 9.8e-51 203.8 117 86.3
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 9.8e-51 203.8 157 70.7
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.3e-50 203.4 152 75.0
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.3e-50 203.4 151 76.2
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.7e-50 203.0 125 85.6
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.2e-50 202.6 125 83.2
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 2.2e-50 202.6 154 74.7
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 118 88.1
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 2.2e-50 202.6 154 74.0
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.2e-50 202.6 125 81.6
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 3.7e-50 201.8 124 84.7
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 3.7e-50 201.8 133 78.2
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 4.9e-50 201.4 117 86.3
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 8.3e-50 200.7 154 73.4
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.9e-49 199.5 137 76.6
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.4e-49 199.1 136 79.4
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 2.4e-49 199.1 159 71.1
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 3.2e-49 198.7 136 78.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 3.2e-49 198.7 134 79.1
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 4.1e-49 198.4 151 74.8
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 7.0e-49 197.6 157 72.0
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 9.2e-49 197.2 116 87.9
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 1.2e-48 196.8 118 87.3
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.6e-48 196.4 116 88.8
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 2.0e-48 196.1 160 71.2
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 2.0e-48 196.1 132 80.3
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.7e-48 195.7 124 83.9
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.7e-48 195.7 124 83.9
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 3.5e-48 195.3 132 79.5
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 3.5e-48 195.3 159 69.2
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 4.6e-48 194.9 159 71.7
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 3.0e-47 192.2 115 88.7
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 6.6e-47 191.0 133 76.7
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 5.6e-46 188.0 124 81.5
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.6e-46 188.0 158 68.4
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 3.6e-45 185.3 116 80.2
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 1.9e-41 172.9 116 74.1
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 3.0e-39 165.6 117 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 6.6e-39 164.5 118 71.2
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 4.0e-36 155.2 104 72.1
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 8.9e-36 154.1 109 76.1
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.5e-35 153.3 146 62.3
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 5.8e-35 151.4 110 74.5
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 9.9e-35 150.6 130 69.2
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 9.9e-35 150.6 124 70.2
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.3e-34 150.2 130 68.5
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 3.7e-34 148.7 88 85.2
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 3.7e-34 148.7 96 79.2
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.1e-33 147.1 124 71.0
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 9.2e-33 144.1 98 76.5
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 2.7e-32 142.5 131 62.6
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.5e-32 142.1 131 63.4
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 1.0e-31 140.6 101 71.3
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 6.6e-31 137.9 122 63.9
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.4e-28 129.4 96 69.8
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 3.9e-15 85.5 64 75.0
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.8e-13 79.3 69 55.1
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 4.9e-10 68.6 105 40.0
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 5.6e-06 55.1 107 36.4


User provided reference genes

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