Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 4.8e-188 661.0 332 100.0
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 5.1e-105 385.2 245 84.1
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.1e-86 324.3 244 69.3
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 7.7e-85 318.2 245 69.0
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 5.0e-84 315.5 241 70.5
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.2e-82 310.8 245 67.3
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 8.0e-82 308.1 243 66.7
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 1.8e-81 307.0 242 69.4
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 6.7e-81 305.1 242 66.1
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 2.8e-79 299.7 239 66.9
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.7e-79 299.3 231 68.4
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 3.7e-79 299.3 231 68.4
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 4.8e-79 298.9 231 68.4
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 6.3e-79 298.5 240 66.2
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.1e-78 297.7 245 67.8
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 3.1e-78 296.2 282 58.5
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 9.1e-78 294.7 246 64.2
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 1.2e-77 294.3 239 66.1
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.2e-77 294.3 240 65.4
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.6e-77 293.9 216 71.3
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 1.6e-77 293.9 240 65.0
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 1.6e-77 293.9 240 65.0
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 5.9e-77 292.0 173 87.9
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 5.9e-77 292.0 248 63.3
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 1.0e-76 291.2 250 64.4
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.7e-76 290.4 239 65.3
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 2.2e-76 290.0 239 63.2
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 2.2e-76 290.0 242 66.1
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.9e-76 289.7 286 57.7
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 3.8e-76 289.3 238 65.1
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 6.5e-76 288.5 241 66.0
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.1e-75 287.7 241 67.6
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.5e-75 287.3 271 60.1
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 4.2e-75 285.8 246 63.0
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 4.2e-75 285.8 242 65.7
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 5.5e-75 285.4 240 64.6
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 5.5e-75 285.4 255 62.4
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 7.2e-75 285.0 244 63.5
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 7.2e-75 285.0 249 65.5
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 7.2e-75 285.0 242 65.7
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.2e-74 284.3 243 63.8
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.1e-74 283.5 221 67.4
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.7e-74 283.1 241 64.7
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 3.6e-74 282.7 239 64.4
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 3.6e-74 282.7 196 72.4
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 6.1e-74 282.0 264 62.1
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 8.0e-74 281.6 243 63.0
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 1.0e-73 281.2 242 62.8
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 3.0e-73 279.6 267 59.6
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 6.8e-73 278.5 244 63.9
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.0e-72 276.9 261 60.2
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 2.0e-72 276.9 240 65.0
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 2.6e-72 276.6 239 62.8
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.4e-72 276.2 244 63.5
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 5.7e-72 275.4 224 65.2
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 7.5e-72 275.0 247 62.3
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.3e-71 274.2 263 59.3
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.3e-71 274.2 263 59.3
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 1.3e-71 274.2 233 64.4
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 1.7e-71 273.9 238 64.3
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 2.8e-71 273.1 238 63.4
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 3.7e-71 272.7 241 62.7
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 3.7e-71 272.7 241 62.7
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 3.7e-71 272.7 250 61.2
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 3.7e-71 272.7 238 63.4
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 3.7e-71 272.7 238 63.4
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.8e-71 272.3 272 57.0
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.8e-71 272.3 272 57.0
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 4.8e-71 272.3 256 60.9
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 1.4e-70 270.8 238 63.9
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 1.4e-70 270.8 243 62.1
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 1.8e-70 270.4 243 60.9
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.1e-70 269.6 225 63.1
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 4.1e-70 269.2 245 62.0
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 4.1e-70 269.2 238 63.4
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 5.4e-70 268.9 191 68.6
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 9.1e-70 268.1 238 63.4
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 9.1e-70 268.1 244 60.7
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 9.1e-70 268.1 244 60.7
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.2e-69 267.7 270 55.9
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.6e-69 267.3 239 62.8
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 2.0e-69 266.9 234 60.3
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.3e-68 264.2 247 61.9
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 1.7e-68 263.8 215 66.0
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 1.7e-68 263.8 292 52.4
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 3.8e-68 262.7 328 50.3
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 8.6e-68 261.5 237 60.8
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 1.1e-67 261.2 265 56.2
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 1.1e-67 261.2 164 76.8
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 2.5e-67 260.0 160 77.5
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 5.5e-67 258.8 251 59.8
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 8.0e-66 255.0 241 60.2
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.2e-64 251.1 248 53.6
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 6.3e-63 245.4 243 56.0
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.1e-62 244.6 248 52.8
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 1.8e-62 243.8 252 56.0
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 2.6e-56 223.4 190 67.4
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 3.4e-56 223.0 221 55.7
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 1.7e-55 220.7 238 55.0
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 4.9e-55 219.2 128 82.0
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 7.0e-54 215.3 243 55.1
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 2.7e-53 213.4 236 52.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 1.3e-52 211.1 211 51.7
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 1.5e-51 207.6 130 75.4
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 1.2e-50 204.5 268 46.6
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 5.8e-48 195.7 108 84.3
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 3.7e-47 193.0 131 71.0
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 5.6e-43 179.1 193 58.0
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 6.8e-41 172.2 186 55.4
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 7.5e-40 168.7 165 55.8
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 7.3e-35 152.1 89 78.7
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.6e-34 149.8 151 57.6
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.2e-29 134.8 112 58.0
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 2.3e-28 130.6 90 67.8
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 9.6e-27 125.2 155 46.5
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 4.2e-22 109.8 112 58.0
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 1.0e-20 105.1 54 92.6
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 8.1e-18 95.5 84 56.0
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 2.9e-15 87.0 47 76.6
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 2.7e-13 80.5 55 70.9
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 1.1e-09 68.6 38 71.1
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-09 65.5 102 47.1
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 2.2e-07 60.8 69 44.9
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 3.8e-07 60.1 31 83.9
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-07 59.3 81 53.1


User provided reference genes

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