Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 3.3e-170 601.7 312 100.0
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 3.4e-167 591.7 312 98.1
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 5.6e-154 547.7 312 89.1
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 8.1e-137 490.7 315 82.9
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 5.7e-130 468.0 333 75.1
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 9.6e-130 467.2 333 75.1
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 4.8e-129 464.9 333 75.1
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 9.0e-128 460.7 330 74.2
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 9.0e-128 460.7 331 74.9
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 1.0e-126 457.2 323 75.9
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.2e-124 450.3 318 76.7
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.3e-123 446.8 328 72.3
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 3.0e-123 445.7 329 73.6
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 8.7e-123 444.1 326 73.3
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.1e-122 443.7 327 73.1
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.5e-122 443.4 325 73.2
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 1.5e-122 443.4 325 73.5
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.9e-122 443.0 329 73.9
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 4.3e-122 441.8 322 72.4
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 7.4e-122 441.0 325 73.2
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 7.4e-122 441.0 329 73.6
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 7.4e-122 441.0 323 72.8
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 9.7e-122 440.7 266 82.3
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 9.7e-122 440.7 266 82.3
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 9.7e-122 440.7 284 77.8
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 1.3e-121 440.3 326 72.4
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.3e-121 440.3 329 73.3
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.6e-121 439.9 330 72.1
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 2.8e-121 439.1 273 81.3
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.7e-121 438.7 274 82.1
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.8e-121 438.3 294 76.5
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 4.8e-121 438.3 328 72.3
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 4.8e-121 438.3 340 68.5
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.1e-120 437.2 310 73.5
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 1.1e-120 437.2 328 72.0
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.8e-120 436.4 321 72.6
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.4e-120 436.0 283 78.1
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.1e-120 435.6 271 80.1
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 5.3e-120 434.9 329 71.1
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 9.0e-120 434.1 325 70.8
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.2e-119 433.7 271 80.1
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.5e-119 433.3 334 68.9
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 2.0e-119 433.0 267 81.3
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.0e-119 433.0 329 70.8
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 2.6e-119 432.6 266 80.5
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 3.4e-119 432.2 317 72.2
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.0e-118 430.6 310 73.2
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 2.9e-118 429.1 317 72.6
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 5.0e-118 428.3 304 73.4
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 8.5e-118 427.6 332 69.9
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 8.5e-118 427.6 282 77.7
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.1e-117 427.2 323 69.3
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 1.1e-117 427.2 317 70.3
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 2.5e-117 426.0 276 77.5
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 4.2e-117 425.2 322 71.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 7.2e-117 424.5 320 72.5
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 9.4e-117 424.1 295 74.2
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.2e-116 423.7 278 76.3
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 1.2e-116 423.7 292 74.0
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.6e-116 423.3 292 73.6
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 2.7e-116 422.5 328 68.9
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 4.6e-116 421.8 293 73.0
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 7.9e-116 421.0 322 69.3
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.0e-115 420.6 313 70.3
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.4e-115 420.2 313 70.3
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.3e-115 419.5 281 75.1
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 2.3e-115 419.5 268 78.4
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 3.0e-115 419.1 281 75.1
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.9e-115 418.7 281 74.7
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 3.9e-115 418.7 311 70.1
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 5.1e-115 418.3 292 73.3
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 6.7e-115 417.9 280 75.0
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 6.7e-115 417.9 280 75.0
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 8.8e-115 417.5 293 73.7
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.5e-114 416.8 313 70.0
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.5e-114 416.8 313 70.0
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.5e-114 416.8 313 70.3
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 9.7e-114 414.1 301 72.4
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.3e-113 413.7 314 67.5
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.2e-113 412.9 322 69.9
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.2e-111 407.1 260 80.4
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 2.6e-111 406.0 280 73.9
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 1.0e-110 404.1 292 71.6
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 4.7e-108 395.2 321 69.2
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 7.4e-106 387.9 322 64.0
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.7e-105 386.7 261 71.3
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 3.7e-105 385.6 285 70.9
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 6.3e-105 384.8 327 66.1
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 5.3e-104 381.7 231 80.5
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 5.3e-104 381.7 231 80.5
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 4.5e-103 378.6 322 62.7
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 7.7e-103 377.9 239 80.3
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.0e-102 377.5 230 80.4
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 1.3e-102 377.1 326 64.7
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 1.1e-101 374.0 277 69.0
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.6e-100 370.2 236 76.3
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 8.0e-100 367.9 233 79.4
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 1.3e-97 360.5 269 67.7
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 8.2e-97 357.8 278 65.1
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.4e-96 357.1 275 66.9
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 5.3e-96 355.1 276 64.9
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 4.5e-95 352.1 310 59.0
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.6e-90 336.3 207 80.7
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 5.7e-90 335.1 279 60.9
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 6.5e-86 321.6 274 62.8
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.9e-85 320.1 265 59.2
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 9.2e-80 301.2 245 62.0
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 5.2e-75 285.4 273 54.2
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 2.7e-63 246.5 308 49.4
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 8.6e-62 241.5 234 60.3
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.8e-60 236.5 230 59.1
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.6e-58 229.9 229 56.3
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 2.2e-57 226.9 205 66.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 2.4e-48 196.8 132 75.0
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.1e-35 154.8 101 68.3
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 8.7e-22 108.6 68 73.5
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.6e-18 97.1 82 58.5
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.2e-09 67.4 46 67.4
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 9.3e-08 62.0 64 56.2


User provided reference genes

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