Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 7.0e-93 344.0 177 100.0
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 3.6e-65 251.9 184 73.4
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 2.1e-57 226.1 175 72.0
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 4.4e-47 191.8 126 73.8
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 4.4e-47 191.8 126 73.8
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 7.1e-45 184.5 176 59.1
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 2.7e-44 182.6 135 67.4
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 3.5e-44 182.2 130 67.7
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 2.3e-43 179.5 182 58.8
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 6.6e-43 177.9 129 69.0
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 8.7e-43 177.6 180 52.2
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 1.9e-42 176.4 128 66.4
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 2.5e-42 176.0 125 67.2
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 5.6e-42 174.9 132 68.2
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.3e-41 173.7 104 77.9
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 1.6e-41 173.3 176 54.5
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.1e-41 172.9 133 65.4
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.1e-41 172.9 133 65.4
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 3.6e-41 172.2 169 57.4
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 4.8e-41 171.8 116 71.6
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 6.2e-41 171.4 120 69.2
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 6.2e-41 171.4 120 69.2
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 6.2e-41 171.4 120 69.2
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 8.1e-41 171.0 165 57.0
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 8.1e-41 171.0 125 64.8
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 8.1e-41 171.0 125 64.8
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 1.4e-40 170.2 137 61.3
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 1.4e-40 170.2 125 64.8
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.4e-40 170.2 129 66.7
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 1.8e-40 169.9 109 74.3
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 2.4e-40 169.5 127 66.1
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 2.4e-40 169.5 125 65.6
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 3.1e-40 169.1 111 72.1
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 4.0e-40 168.7 120 68.3
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 4.0e-40 168.7 110 72.7
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 5.3e-40 168.3 123 66.7
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 6.9e-40 167.9 168 54.2
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 1.2e-39 167.2 180 53.3
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.5e-39 166.8 126 63.5
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.5e-39 166.8 177 53.7
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 2.0e-39 166.4 125 64.0
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 2.0e-39 166.4 125 64.0
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 2.0e-39 166.4 117 68.4
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.0e-39 166.4 104 75.0
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 2.6e-39 166.0 116 69.8
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 2.6e-39 166.0 130 64.6
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 3.4e-39 165.6 120 69.2
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 3.4e-39 165.6 125 63.2
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 3.4e-39 165.6 125 64.8
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 3.4e-39 165.6 117 66.7
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 4.4e-39 165.2 176 54.0
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 4.4e-39 165.2 121 66.9
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 4.4e-39 165.2 101 77.2
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 5.8e-39 164.9 109 73.4
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 7.6e-39 164.5 129 62.8
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 7.6e-39 164.5 135 62.2
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 7.6e-39 164.5 176 54.0
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 7.6e-39 164.5 124 63.7
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 2.9e-38 162.5 109 72.5
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 2.9e-38 162.5 136 61.8
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 2.9e-38 162.5 123 64.2
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 2.9e-38 162.5 142 59.2
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 2.9e-38 162.5 160 53.1
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 2.9e-38 162.5 133 63.2
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 3.8e-38 162.2 109 71.6
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 4.9e-38 161.8 116 66.4
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 4.9e-38 161.8 129 62.0
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 6.4e-38 161.4 177 49.7
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 8.4e-38 161.0 136 61.0
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 1.4e-37 160.2 105 72.4
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 1.4e-37 160.2 104 68.3
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 1.9e-37 159.8 121 64.5
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 3.2e-37 159.1 133 60.9
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 3.2e-37 159.1 173 52.6
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 4.2e-37 158.7 114 66.7
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 4.2e-37 158.7 122 60.7
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 4.2e-37 158.7 122 60.7
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 5.4e-37 158.3 110 68.2
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 7.1e-37 157.9 114 66.7
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 9.3e-37 157.5 137 59.1
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 1.2e-36 157.1 130 62.3
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 2.1e-36 156.4 101 75.2
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 2.1e-36 156.4 114 65.8
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 3.5e-36 155.6 124 64.5
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 4.6e-36 155.2 101 73.3
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 4.6e-36 155.2 151 55.6
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 7.9e-36 154.5 176 51.7
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 3.0e-35 152.5 161 54.0
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 3.0e-35 152.5 161 54.0
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 3.0e-35 152.5 161 54.0
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 3.9e-35 152.1 178 48.3
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 5.1e-35 151.8 85 82.4
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 5.1e-35 151.8 172 50.0
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.5e-34 149.4 104 64.4
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 4.3e-34 148.7 85 82.4
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 1.3e-33 147.1 108 65.7
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 2.8e-33 146.0 88 77.3
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.4e-32 143.7 89 75.3
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 1.5e-31 140.2 106 57.5
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 2.4e-29 132.9 122 50.0
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 2.4e-29 132.9 122 50.0
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 2.1e-28 129.8 114 51.8
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 9.6e-26 120.9 100 51.0
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 2.1e-25 119.8 111 51.4
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 8.7e-11 71.2 53 62.3


User provided reference genes

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