Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 1.4e-38 162.5 83 100.0
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.4e-32 142.5 81 87.7
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 9.4e-32 139.8 81 86.4
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 3.3e-29 131.3 76 86.8
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 9.1e-27 123.2 80 73.8
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 4.5e-26 120.9 79 73.4
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 5.9e-26 120.6 80 75.0
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 2.9e-25 118.2 82 68.3
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 2.9e-25 118.2 82 68.3
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 5.0e-25 117.5 80 71.2
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 6.5e-25 117.1 78 73.1
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 6.5e-25 117.1 74 75.7
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 1.1e-24 116.3 79 72.2
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.5e-24 115.9 78 73.1
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 1.5e-24 115.9 78 73.1
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 1.9e-24 115.5 79 69.6
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 1.9e-24 115.5 78 73.1
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 2.5e-24 115.2 79 70.9
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 3.2e-24 114.8 80 71.2
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 3.2e-24 114.8 79 70.9
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 3.2e-24 114.8 79 68.4
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 5.5e-24 114.0 71 76.1
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 5.5e-24 114.0 79 70.9
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 5.5e-24 114.0 78 69.2
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 7.2e-24 113.6 79 70.9
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 7.2e-24 113.6 79 70.9
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 9.4e-24 113.2 80 70.0
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 1.2e-23 112.8 79 70.9
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 1.6e-23 112.5 78 69.2
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 6.1e-23 110.5 71 74.6
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 8.0e-23 110.2 72 72.2
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 1.0e-22 109.8 78 67.9
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 2.3e-22 108.6 77 67.5
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 2.3e-22 108.6 84 67.9
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 3.0e-22 108.2 69 73.9
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 4.0e-22 107.8 79 65.8
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 5.2e-22 107.5 75 72.0
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 6.7e-22 107.1 82 65.9
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 6.7e-22 107.1 78 70.5
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 8.8e-22 106.7 79 67.1
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.1e-21 106.3 75 72.0
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 1.5e-21 105.9 78 65.4
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 2.0e-21 105.5 80 61.2
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 2.6e-21 105.1 77 64.9
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 2.6e-21 105.1 78 65.4
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 2.6e-21 105.1 70 74.3
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 4.4e-21 104.4 109 52.3
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 4.4e-21 104.4 76 64.5
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 4.4e-21 104.4 78 60.3
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 9.7e-21 103.2 75 70.7
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 9.7e-21 103.2 68 73.5
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.7e-20 102.4 77 62.3
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 2.2e-20 102.1 80 65.0
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 3.7e-20 101.3 69 75.4
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 4.8e-20 100.9 78 61.5
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 8.2e-20 100.1 71 69.0
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 8.2e-20 100.1 78 61.5
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 8.2e-20 100.1 81 65.4
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 1.1e-19 99.8 73 68.5
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 1.4e-19 99.4 79 65.8
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.8e-19 99.0 75 64.0
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 2.4e-19 98.6 78 59.0
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 2.4e-19 98.6 73 63.0
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 3.1e-19 98.2 64 68.8
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 5.3e-19 97.4 78 59.0
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 5.3e-19 97.4 74 63.5
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 1.2e-18 96.3 78 57.7
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 1.6e-18 95.9 78 57.7
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.6e-18 95.9 78 56.4
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.6e-18 95.9 73 64.4
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 2.0e-18 95.5 79 55.7
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 2.0e-18 95.5 79 55.7
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 5.9e-18 94.0 65 75.4
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 5.9e-18 94.0 63 74.6
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 7.7e-18 93.6 79 54.4
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 1.7e-17 92.4 54 79.6
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 1.7e-17 92.4 79 57.0
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 5.0e-17 90.9 79 53.2
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 6.5e-17 90.5 81 58.0
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 8.5e-17 90.1 79 54.4
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 3.2e-16 88.2 52 78.8
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 4.2e-16 87.8 61 70.5
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 7.2e-16 87.0 58 72.4
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 9.4e-16 86.7 76 56.6
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.6e-15 85.9 61 67.2
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 2.7e-15 85.1 63 61.9
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 2.7e-15 85.1 63 61.9
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 8.0e-15 83.6 63 60.3
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 8.0e-15 83.6 63 60.3
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 8.0e-15 83.6 62 66.1
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.2e-13 79.7 49 79.6
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 1.2e-13 79.7 64 65.6
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 1.5e-13 79.3 57 64.9
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.7e-12 74.7 59 59.3
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.7e-12 74.7 59 57.6
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 4.8e-12 74.3 46 76.1
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 1.1e-11 73.2 51 62.7
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 2.4e-11 72.0 48 72.9
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 1.5e-08 62.8 46 56.5
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 7.2e-08 60.5 50 58.0
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 2.7e-07 58.5 48 47.9


User provided reference genes

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