Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 2.0e-70 269.2 161 100.0
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 3.7e-24 115.5 173 46.8
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 1.5e-22 110.2 204 51.5
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 5.9e-14 81.6 184 34.2
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 2.5e-12 76.3 166 41.0
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 9.4e-12 74.3 71 62.0
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 1.2e-11 73.9 69 58.0
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 1.8e-10 70.1 177 36.2
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 1.8e-10 70.1 130 38.5
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 8.8e-10 67.8 58 65.5
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 1.5e-09 67.0 59 62.7
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 5.7e-09 65.1 61 59.0
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 5.7e-09 65.1 70 54.3
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 7.4e-09 64.7 75 54.7
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 9.7e-09 64.3 63 57.1
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 9.7e-09 64.3 70 52.9
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 9.7e-09 64.3 169 32.0
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 1.3e-08 63.9 70 57.1
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 1.3e-08 63.9 72 54.2
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 1.3e-08 63.9 69 53.6
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 1.3e-08 63.9 72 54.2
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 1.3e-08 63.9 72 54.2
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.7e-08 63.5 65 55.4
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.7e-08 63.5 65 60.0
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 2.2e-08 63.2 69 55.1
Lsat_1_v5_gn_6_32400 Lactuca sativa HOM05D004206 ORTHO05D003325 2.8e-08 62.8 139 38.8
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.8e-08 62.8 70 52.9
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 2.8e-08 62.8 65 58.5
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 2.8e-08 62.8 61 57.4
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 3.7e-08 62.4 66 53.0
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 4.8e-08 62.0 58 60.3
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 6.3e-08 61.6 58 60.3
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 6.3e-08 61.6 54 64.8
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 8.2e-08 61.2 68 54.4
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 8.2e-08 61.2 70 48.6
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 8.2e-08 61.2 63 57.1
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 1.1e-07 60.8 73 50.7
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 1.1e-07 60.8 91 46.2
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 1.1e-07 60.8 58 58.6
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.1e-07 60.8 130 36.2
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.1e-07 60.8 75 49.3
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.4e-07 60.5 68 55.9
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 2.4e-07 59.7 63 50.8
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.4e-07 59.7 84 44.0
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 2.4e-07 59.7 73 49.3
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 3.1e-07 59.3 68 54.4
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 3.1e-07 59.3 64 57.8
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 3.1e-07 59.3 61 57.4
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 4.1e-07 58.9 63 55.6
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 4.1e-07 58.9 60 60.0
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 4.1e-07 58.9 60 58.3
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 4.1e-07 58.9 71 54.9
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 5.3e-07 58.5 70 48.6
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 5.3e-07 58.5 56 60.7
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 5.3e-07 58.5 66 53.0
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 7.0e-07 58.2 62 53.2
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.0e-07 58.2 73 53.4
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 7.0e-07 58.2 70 48.6
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 9.1e-07 57.8 65 55.4
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 9.1e-07 57.8 135 36.3
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 9.1e-07 57.8 61 55.7
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.2e-06 57.4 105 42.9
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 1.2e-06 57.4 61 50.8
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 1.2e-06 57.4 44 65.9
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 1.2e-06 57.4 71 53.5
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 1.2e-06 57.4 71 52.1
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 1.6e-06 57.0 62 53.2
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 1.6e-06 57.0 57 59.6
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 2.0e-06 56.6 51 58.8
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 2.6e-06 56.2 52 59.6
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 2.6e-06 56.2 134 35.1
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.5e-06 55.8 56 53.6
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 3.5e-06 55.8 68 51.5
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 3.5e-06 55.8 53 60.4
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 3.5e-06 55.8 47 61.7
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 4.5e-06 55.5 47 66.0
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 4.5e-06 55.5 137 32.8
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 4.5e-06 55.5 71 47.9
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 5.9e-06 55.1 60 56.7
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 5.9e-06 55.1 66 51.5
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 5.9e-06 55.1 61 57.4
Sed0018769 Sechium edule HOM05D004206 ORTHO05D003325 5.9e-06 55.1 55 54.5
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 5.9e-06 55.1 71 47.9
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 7.7e-06 54.7 129 37.2
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 7.7e-06 54.7 60 51.7
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 7.7e-06 54.7 60 51.7
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.7e-06 54.7 68 50.0
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 7.7e-06 54.7 66 51.5
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 7.7e-06 54.7 53 60.4


User provided reference genes

Program Settings