Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0349121 Helianthus annuus HOM05D000041 ORTHO05D224563 2.6e-40 168.7 85 100.0
HanXRQChr11g0349051 Helianthus annuus HOM05D000041 ORTHO05D000452 2.1e-26 122.5 88 71.6
HanXRQChr11g0352261 Helianthus annuus HOM05D000041 ORTHO05D000452 4.7e-26 121.3 88 72.7
HanXRQChr08g0233201 Helianthus annuus HOM05D000041 ORTHO05D000452 8.0e-26 120.6 85 71.8
HanXRQChr15g0495801 Helianthus annuus HOM05D000041 ORTHO05D000452 2.0e-24 115.9 88 68.2
HanXRQChr11g0352661 Helianthus annuus HOM05D000041 ORTHO05D015103 1.3e-20 103.2 88 63.6
HanXRQChr11g0352531 Helianthus annuus HOM05D000041 ORTHO05D015103 7.3e-19 97.4 65 78.5
HanXRQChr13g0391351 Helianthus annuus HOM05D000041 ORTHO05D015103 7.3e-19 97.4 65 78.5
HanXRQChr09g0249871 Helianthus annuus HOM05D000041 ORTHO05D223541 8.0e-18 94.0 61 73.8
HanXRQChr11g0352781 Helianthus annuus HOM05D000041 ORTHO05D000452 8.0e-18 94.0 65 72.3
HanXRQChr11g0352851 Helianthus annuus HOM05D000041 ORTHO05D223873 1.8e-17 92.8 65 72.3
HanXRQChr11g0352871 Helianthus annuus HOM05D000041 ORTHO05D000452 2.3e-17 92.4 65 72.3
HanXRQChr11g0353301 Helianthus annuus HOM05D000041 ORTHO05D015103 3.1e-17 92.0 65 72.3
HanXRQChr11g0353371 Helianthus annuus HOM05D000041 ORTHO05D226039 3.1e-17 92.0 60 75.0
HanXRQChr09g0249831 Helianthus annuus HOM05D000041 ORTHO05D000452 2.0e-16 89.4 62 67.7
HanXRQChr11g0352431 Helianthus annuus HOM05D000041 ORTHO05D015103 4.4e-16 88.2 65 70.8
HanXRQChr11g0352731 Helianthus annuus HOM05D000041 ORTHO05D000452 7.5e-16 87.4 64 65.6
HanXRQChr11g0352821 Helianthus annuus HOM05D000041 ORTHO05D000452 7.5e-16 87.4 64 65.6
HanXRQChr11g0352251 Helianthus annuus HOM05D000041 ORTHO05D015103 1.3e-15 86.7 65 70.8
HanXRQChr11g0352891 Helianthus annuus HOM05D000041 ORTHO05D000452 1.3e-15 86.7 61 67.2
HanXRQChr11g0353291 Helianthus annuus HOM05D000041 ORTHO05D223747 1.3e-15 86.7 61 65.6
HanXRQChr11g0352571 Helianthus annuus HOM05D000041 ORTHO05D220260 1.7e-15 86.3 64 64.1
HanXRQChr11g0352751 Helianthus annuus HOM05D000041 ORTHO05D223242 1.7e-15 86.3 64 64.1
HanXRQChr00c0211g0572601 Helianthus annuus HOM05D000041 ORTHO05D000452 4.9e-15 84.7 64 62.5
HanXRQChr11g0349091 Helianthus annuus HOM05D000041 ORTHO05D000452 4.9e-15 84.7 61 63.9
ECA233G5907 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.1e-14 83.6 80 52.5
HanXRQChr11g0353111 Helianthus annuus HOM05D000041 ORTHO05D000452 1.1e-14 83.6 61 62.3
HanXRQChr11g0353411 Helianthus annuus HOM05D000041 ORTHO05D000452 1.1e-14 83.6 61 62.3
HanXRQChr14g0435901 Helianthus annuus HOM05D000041 ORTHO05D000452 1.1e-14 83.6 82 53.7
ECA248G3637 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.9e-14 82.8 79 51.9
HanXRQChr11g0349161 Helianthus annuus HOM05D000041 ORTHO05D220996 1.9e-14 82.8 61 62.3
ECA248G1511 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.4e-14 82.4 64 62.5
HanXRQChr00c0211g0572591 Helianthus annuus HOM05D000041 ORTHO05D000452 3.2e-14 82.0 85 50.6
HanXRQChr09g0249881 Helianthus annuus HOM05D000041 ORTHO05D220329 3.2e-14 82.0 61 63.9
HanXRQChr11g0352461 Helianthus annuus HOM05D000041 ORTHO05D000452 4.1e-14 81.6 61 65.6
HanXRQChr11g0352921 Helianthus annuus HOM05D000041 ORTHO05D000452 4.1e-14 81.6 61 63.9
HanXRQChr11g0345991 Helianthus annuus HOM05D000041 ORTHO05D000452 5.4e-14 81.3 62 59.7
ECA248G3654 Erigeron canadensis HOM05D000041 ORTHO05D000452 7.0e-14 80.9 81 51.9
HanXRQChr02g0055491 Helianthus annuus HOM05D000041 ORTHO05D000452 7.0e-14 80.9 79 53.2
HanXRQChr11g0323611 Helianthus annuus HOM05D000041 ORTHO05D224431 7.0e-14 80.9 64 62.5
HanXRQChr13g0391361 Helianthus annuus HOM05D000041 ORTHO05D000452 9.2e-14 80.5 61 59.0
HanXRQChr11g0352721 Helianthus annuus HOM05D000041 ORTHO05D000452 1.2e-13 80.1 61 60.7
HanXRQChr11g0352791 Helianthus annuus HOM05D000041 ORTHO05D223289 1.2e-13 80.1 61 60.7
HanXRQChr11g0353311 Helianthus annuus HOM05D000041 ORTHO05D000452 1.2e-13 80.1 64 59.4
ECA248G3432 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.6e-13 79.7 80 51.2
HanXRQChr11g0353821 Helianthus annuus HOM05D000041 ORTHO05D000452 2.0e-13 79.3 61 57.4
HanXRQChr05g0137771 Helianthus annuus HOM05D000041 ORTHO05D222454 4.6e-13 78.2 74 50.0
HanXRQChr10g0299131 Helianthus annuus HOM05D000041 ORTHO05D000452 4.6e-13 78.2 75 53.3
HanXRQChr11g0353341 Helianthus annuus HOM05D000041 ORTHO05D000452 4.6e-13 78.2 61 57.4
HanXRQChr11g0353271 Helianthus annuus HOM05D000041 ORTHO05D226652 7.8e-13 77.4 61 60.7
HanXRQChr09g0249821 Helianthus annuus HOM05D000041 ORTHO05D223901 1.0e-12 77.0 61 55.7
ECA248G0745 Erigeron canadensis HOM05D000041 ORTHO05D015103 2.3e-12 75.9 61 57.4
ECA248G0564 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.9e-12 75.1 66 51.5
ECA248G1035 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.9e-12 75.1 78 48.7
HanXRQChr03g0067741 Helianthus annuus HOM05D000041 ORTHO05D000452 3.9e-12 75.1 62 54.8
HanXRQChr05g0137761 Helianthus annuus HOM05D000041 ORTHO05D000452 3.9e-12 75.1 61 54.1
ECA248G3666 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.6e-12 74.3 64 54.7
HanXRQChr11g0347851 Helianthus annuus HOM05D000041 ORTHO05D000452 6.6e-12 74.3 62 58.1
ECA248G3439 Erigeron canadensis HOM05D000191 ORTHO05D000452 1.1e-11 73.6 68 52.9
HanXRQChr02g0055501 Helianthus annuus HOM05D000041 ORTHO05D000452 1.1e-11 73.6 61 55.7
ECA248G0843 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.5e-11 73.2 78 47.4
ECA240G1130 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.3e-11 71.6 78 46.2
ECA248G1767 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.2e-10 70.1 68 50.0
ECA248G3921 Erigeron canadensis HOM05D000006 ORTHO05D000452 2.8e-10 68.9 62 54.8
ECA248G3325 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-10 67.8 62 48.4
ECA240G4337 Erigeron canadensis HOM05D000041 ORTHO05D015103 8.1e-10 67.4 72 50.0
HanXRQChr11g0353831 Helianthus annuus HOM05D000041 ORTHO05D000452 8.1e-10 67.4 63 50.8
Lsat_1_v5_gn_1_42741 Lactuca sativa HOM05D000041 ORTHO05D000452 8.1e-10 67.4 68 50.0
ECA246G2684 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.8e-09 66.2 68 48.5
Lsat_1_v5_gn_1_84440 Lactuca sativa HOM05D000041 ORTHO05D000452 1.8e-09 66.2 68 47.1
ECA238G0060 Erigeron canadensis HOM05D000041 ORTHO05D045248 4.0e-09 65.1 63 52.4
ECA248G0463 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.0e-09 65.1 68 51.5
ECA248G2363 Erigeron canadensis HOM05D000041 ORTHO05D187510 5.2e-09 64.7 62 53.2
ECA247G2572 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.8e-09 64.3 57 56.1
ECA248G3201 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.8e-09 64.3 64 50.0
HanXRQChr11g0347401 Helianthus annuus HOM05D000041 ORTHO05D000452 6.8e-09 64.3 62 48.4
ECA238G4845 Erigeron canadensis HOM05D000041 ORTHO05D000452 8.9e-09 63.9 68 48.5
HanXRQChr14g0439001 Helianthus annuus HOM05D000041 ORTHO05D000452 8.9e-09 63.9 65 49.2
HanXRQChr17g0546321 Helianthus annuus HOM05D000041 ORTHO05D000452 8.9e-09 63.9 68 47.1
Lsat_1_v5_gn_1_42641 Lactuca sativa HOM05D000041 ORTHO05D000452 8.9e-09 63.9 62 48.4
ECA234G2247 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.2e-08 63.5 68 50.0
HanXRQChr14g0439701 Helianthus annuus HOM05D000041 ORTHO05D000452 1.2e-08 63.5 65 49.2
Lsat_1_v5_gn_1_44000 Lactuca sativa HOM05D000041 ORTHO05D000452 1.2e-08 63.5 62 50.0
ECA248G2039 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.6e-08 62.4 45 60.0
ECA232G0913 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.4e-08 62.0 68 48.5
ECA248G2291 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.4e-08 62.0 77 42.9
ECA248G2349 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.4e-08 61.6 45 60.0
HanXRQChr01g0030331 Helianthus annuus HOM05D000041 ORTHO05D000452 4.4e-08 61.6 63 50.8
ECA248G2121 Erigeron canadensis HOM05D000041 ORTHO05D000452 9.9e-08 60.5 45 60.0
HanXRQChr01g0030301 Helianthus annuus HOM05D000041 ORTHO05D000452 9.9e-08 60.5 68 44.1
HanXRQChr11g0348951 Helianthus annuus HOM05D000041 ORTHO05D000452 9.9e-08 60.5 62 50.0
HanXRQChr11g0353541 Helianthus annuus HOM05D000041 ORTHO05D025307 9.9e-08 60.5 64 46.9
ECA247G1111 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-07 60.1 68 44.1
HanXRQChr14g0435601 Helianthus annuus HOM05D000521 ORTHO05D000384 1.3e-07 60.1 60 50.0
HanXRQChr14g0436341 Helianthus annuus HOM05D000521 ORTHO05D000384 1.3e-07 60.1 61 47.5
ECA234G3463 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.7e-07 59.7 68 45.6
ECA247G1076 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.7e-07 59.7 68 45.6
ECA248G1275 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.7e-07 59.7 68 47.1
HanXRQChr01g0001391 Helianthus annuus HOM05D000041 ORTHO05D000452 1.7e-07 59.7 67 46.3
HanXRQChr01g0001411 Helianthus annuus HOM05D000041 ORTHO05D000452 1.7e-07 59.7 64 46.9
HanXRQChr11g0348581 Helianthus annuus HOM05D000041 ORTHO05D000452 1.7e-07 59.7 67 46.3
HanXRQChr14g0433771 Helianthus annuus HOM05D000041 ORTHO05D000452 1.7e-07 59.7 61 47.5
Lsat_1_v5_gn_1_42601 Lactuca sativa HOM05D000479 ORTHO05D000452 1.7e-07 59.7 62 46.8
ECA238G4137 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.2e-07 59.3 68 47.1
ECA240G1132 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.2e-07 59.3 61 45.9
ECA246G4484 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.2e-07 59.3 68 47.1
ECA248G2511 Erigeron canadensis HOM05D000012 ORTHO05D000452 2.2e-07 59.3 57 49.1
ECA248G2777 Erigeron canadensis HOM05D004140 ORTHO05D000452 2.2e-07 59.3 78 44.9
HanXRQChr03g0063291 Helianthus annuus HOM05D000041 ORTHO05D220172 2.2e-07 59.3 61 45.9
HanXRQChr11g0348621 Helianthus annuus HOM05D000041 ORTHO05D000452 2.2e-07 59.3 67 46.3
HanXRQChr13g0426081 Helianthus annuus HOM05D000041 ORTHO05D000452 2.2e-07 59.3 63 47.6
ECA238G3405 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.9e-07 58.9 63 47.6
HanXRQChr11g0347381 Helianthus annuus HOM05D000041 ORTHO05D000452 2.9e-07 58.9 62 46.8
HanXRQChr11g0347781 Helianthus annuus HOM05D000041 ORTHO05D000452 2.9e-07 58.9 64 48.4
ECA234G2144 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.7e-07 58.5 62 46.8
ECA238G2692 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.7e-07 58.5 68 48.5
HanXRQChr01g0001431 Helianthus annuus HOM05D000041 ORTHO05D000452 3.7e-07 58.5 61 49.2
ECA248G0954 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.9e-07 58.2 68 41.2
ECA248G3709 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.9e-07 58.2 61 47.5
ECA248G1289 Erigeron canadensis HOM05D000041 ORTHO05D015639 6.4e-07 57.8 68 45.6
ECA248G3842 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.4e-07 57.8 68 45.6
HanXRQChr11g0351011 Helianthus annuus HOM05D000041 ORTHO05D000452 6.4e-07 57.8 67 44.8
HanXRQChr17g0563881 Helianthus annuus HOM05D000041 ORTHO05D221756 6.4e-07 57.8 67 46.3
ECA236G3795 Erigeron canadensis HOM05D000006 ORTHO05D000452 8.3e-07 57.4 63 49.2
ECA247G2817 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.3e-07 57.4 61 42.6
ECA247G2884 Erigeron canadensis HOM05D000041 ORTHO05D000452 8.3e-07 57.4 68 42.6
ECA248G3832 Erigeron canadensis HOM05D000041 ORTHO05D000452 8.3e-07 57.4 68 44.1
HanXRQChr01g0001361 Helianthus annuus HOM05D000041 ORTHO05D000452 8.3e-07 57.4 71 42.3
ECA247G1654 Erigeron canadensis HOM05D000041 ORTHO05D187122 1.1e-06 57.0 61 42.6
ECA248G0877 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.1e-06 57.0 68 44.1
HanXRQChr14g0439681 Helianthus annuus HOM05D000041 ORTHO05D045248 1.1e-06 57.0 63 44.4
HanXRQChr11g0347431 Helianthus annuus HOM05D000041 ORTHO05D025307 1.4e-06 56.6 61 45.9
HanXRQChr14g0432101 Helianthus annuus HOM05D000055 ORTHO05D000452 1.4e-06 56.6 66 40.9
ECA246G1402 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.9e-06 56.2 68 41.2
HanXRQChr14g0437841 Helianthus annuus HOM05D000041 ORTHO05D000452 1.9e-06 56.2 62 51.6
ECA240G4343 Erigeron canadensis HOM05D000041 ORTHO05D025307 2.4e-06 55.8 68 42.6
ECA248G0639 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.4e-06 55.8 43 58.1
HanXRQChr09g0239141 Helianthus annuus HOM05D000041 ORTHO05D225420 2.4e-06 55.8 68 42.6
ECA240G1671 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.2e-06 55.5 81 40.7
ECA246G4144 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.2e-06 55.5 63 46.0
HanXRQChr01g0030121 Helianthus annuus HOM05D000041 ORTHO05D000452 3.2e-06 55.5 61 42.6
HanXRQChr13g0426061 Helianthus annuus HOM05D000315 ORTHO05D000527 3.2e-06 55.5 65 43.1
ECA234G3860 Erigeron canadensis HOM05D000041 ORTHO05D015639 4.1e-06 55.1 68 39.7
ECA240G4469 Erigeron canadensis HOM05D000041 ORTHO05D015639 4.1e-06 55.1 68 41.2
HanXRQChr01g0030341 Helianthus annuus HOM05D000041 ORTHO05D000452 4.1e-06 55.1 68 41.2
HanXRQChr02g0057341 Helianthus annuus HOM05D000041 ORTHO05D000452 4.1e-06 55.1 68 47.1
HanXRQChr11g0347721 Helianthus annuus HOM05D000041 ORTHO05D000452 5.4e-06 54.7 68 41.2


User provided reference genes

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