Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 8.0e-197 690.3 357 100.0
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 9.4e-105 384.4 285 72.3
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 3.2e-89 332.8 246 74.0
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 4.0e-71 272.7 285 58.2
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 1.5e-70 270.8 309 51.5
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 7.5e-70 268.5 307 52.1
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 2.4e-68 263.5 317 47.9
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 9.2e-68 261.5 312 51.6
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 9.2e-68 261.5 327 46.5
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.2e-67 261.2 327 48.9
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 7.8e-67 258.5 304 49.7
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.3e-66 257.7 321 48.3
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 3.9e-66 256.1 316 47.2
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 3.9e-66 256.1 311 48.9
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 6.6e-66 255.4 309 48.5
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.5e-65 253.4 308 48.7
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.1e-64 250.4 308 48.4
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 2.8e-64 250.0 324 46.9
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.8e-63 247.3 306 50.3
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 4.0e-63 246.1 320 46.2
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 5.2e-63 245.7 325 47.1
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 8.9e-63 245.0 291 50.5
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.5e-62 244.2 336 47.9
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 5.8e-62 242.3 324 47.8
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 2.2e-61 240.4 291 49.8
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 6.4e-61 238.8 267 55.1
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 1.1e-60 238.0 301 49.5
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 1.4e-60 237.7 300 48.0
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 1.9e-60 237.3 326 45.1
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 4.1e-60 236.1 319 46.1
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 5.4e-60 235.7 303 49.2
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 7.1e-60 235.3 373 41.3
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 7.1e-60 235.3 294 50.0
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.2e-59 234.6 326 45.4
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.6e-59 234.2 325 44.3
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 2.7e-59 233.4 307 45.9
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 2.7e-59 233.4 314 45.5
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 3.5e-59 233.0 308 46.1
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 1.0e-58 231.5 316 44.3
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 1.7e-58 230.7 308 46.1
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.7e-58 230.7 307 45.6
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.3e-58 230.3 294 45.2
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 2.3e-58 230.3 307 46.3
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 1.9e-57 227.3 320 45.0
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 1.9e-57 227.3 304 48.7
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 4.7e-56 222.6 267 49.1
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 8.1e-56 221.9 337 42.7
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 4.0e-55 219.5 315 43.2
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 6.8e-55 218.8 389 38.8
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 8.9e-55 218.4 318 43.7
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 2.6e-54 216.9 284 47.5
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 2.6e-54 216.9 325 41.2
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 3.4e-54 216.5 370 40.5
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 3.4e-54 216.5 300 46.3
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 3.4e-54 216.5 297 44.4
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 5.8e-54 215.7 287 47.7
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 7.6e-54 215.3 318 42.8
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 2.2e-53 213.8 307 44.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 2.9e-53 213.4 307 44.0
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 4.9e-53 212.6 316 42.1
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 6.4e-53 212.2 330 42.4
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 8.4e-53 211.8 315 42.2
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.1e-52 211.5 322 42.5
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 1.2e-51 208.0 285 43.9
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 1.6e-51 207.6 292 44.2
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 3.5e-51 206.5 285 44.9
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 3.9e-50 203.0 295 42.7
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.1e-49 201.4 264 47.0
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 2.1e-48 197.2 319 42.3
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 2.2e-45 187.2 306 41.2
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 3.8e-45 186.4 296 41.2
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 3.8e-45 186.4 227 48.5
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 4.9e-45 186.0 243 47.3
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 6.4e-45 185.7 238 45.8
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 9.3e-44 181.8 268 41.4
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 2.1e-43 180.6 249 43.4
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 2.1e-43 180.6 242 45.0
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 4.6e-43 179.5 291 40.9
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 1.7e-42 177.6 292 41.1
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.1e-40 170.6 255 42.4
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 4.8e-40 169.5 169 53.3
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 6.2e-40 169.1 356 36.8
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 4.0e-39 166.4 261 40.2
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 6.9e-39 165.6 213 46.0
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 1.2e-38 164.9 297 40.7
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 7.6e-38 162.2 179 47.5
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 4.2e-36 156.4 163 55.2
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 5.4e-36 156.0 322 37.0
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.1e-28 131.7 96 64.6
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 4.2e-28 129.8 227 43.6
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 8.7e-26 122.1 359 28.1
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 2.5e-25 120.6 163 42.9
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 4.3e-25 119.8 180 41.7
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 1.2e-22 111.7 97 55.7
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.5e-22 109.8 84 64.3
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 3.5e-19 100.1 245 33.1
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.1e-17 95.1 156 39.7
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.1e-15 87.0 76 64.5
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 4.1e-15 86.7 92 57.6
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 1.7e-13 81.3 65 63.1
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 3.8e-13 80.1 388 23.5
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 2.7e-11 73.9 65 61.5
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 7.9e-11 72.4 89 44.9
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 5.1e-10 69.7 127 34.6
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 4.3e-09 66.6 41 80.5
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 5.7e-09 66.2 65 56.9
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.7e-08 64.7 45 66.7
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 6.3e-08 62.8 150 36.7
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.1e-07 62.0 100 35.0
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 4.1e-07 60.1 62 50.0
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 9.1e-07 58.9 174 26.4
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 3.4e-06 57.0 134 28.4


User provided reference genes

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