Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0347281 Helianthus annuus HOM05D000003 ORTHO05D002335 1.3e-60 236.1 110 100.0
HanXRQChr09g0261431 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-21 106.7 96 42.7
HanXRQChr15g0497301 Helianthus annuus HOM05D000003 ORTHO05D000004 1.5e-21 106.3 93 48.4
HanXRQChr01g0027891 Helianthus annuus HOM05D000003 ORTHO05D000004 1.9e-19 99.4 99 41.4
HanXRQChr09g0246731 Helianthus annuus HOM05D000003 ORTHO05D000004 3.9e-17 91.7 93 44.1
HanXRQChr17g0550341 Helianthus annuus HOM05D000003 ORTHO05D000004 5.1e-17 91.3 95 38.9
HanXRQChr05g0162321 Helianthus annuus HOM05D000003 ORTHO05D000004 8.7e-17 90.5 94 36.2
HanXRQChr11g0345661 Helianthus annuus HOM05D000003 ORTHO05D000004 8.7e-17 90.5 94 36.2
HanXRQChr05g0148651 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-16 90.1 93 35.5
ECA246G0214 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.3e-16 88.2 94 37.2
HanXRQChr08g0227851 Helianthus annuus HOM05D000003 ORTHO05D000004 5.6e-16 87.8 91 37.4
HanXRQChr13g0387241 Helianthus annuus HOM05D000003 ORTHO05D000004 7.3e-16 87.4 93 38.7
ECA233G6064 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.6e-15 85.1 94 38.3
HanXRQChr05g0136121 Helianthus annuus HOM05D000003 ORTHO05D000004 8.1e-15 84.0 96 34.4
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-14 83.6 86 36.0
ECA246G1196 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.8e-14 82.8 93 37.6
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 3.1e-14 82.0 97 34.0
HanXRQChr07g0206811 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-14 81.6 91 37.4
ECA238G0082 Erigeron canadensis HOM05D000593 ORTHO05D000562 5.2e-14 81.3 98 33.7
HanXRQChr07g0203731 Helianthus annuus HOM05D000003 ORTHO05D000004 5.2e-14 81.3 91 35.2
HanXRQChr13g0401811 Helianthus annuus HOM05D000003 ORTHO05D000004 5.2e-14 81.3 96 33.3
ECA236G0698 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.9e-14 80.9 91 39.6
ECA236G4381 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.9e-14 80.9 94 36.2
ECA246G4036 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.9e-14 80.9 94 30.9
HanXRQChr05g0129651 Helianthus annuus HOM05D000003 ORTHO05D002335 1.5e-13 79.7 96 30.2
ECA236G0696 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.0e-13 79.3 94 37.2
ECA247G0930 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.0e-13 79.3 93 34.4
HanXRQChr17g0535871 Helianthus annuus HOM05D000003 ORTHO05D000004 3.4e-13 78.6 94 34.0
HanXRQChr10g0279601 Helianthus annuus HOM05D000003 ORTHO05D000004 5.8e-13 77.8 91 35.2
HanXRQChr15g0474271 Helianthus annuus HOM05D000003 ORTHO05D000004 5.8e-13 77.8 91 34.1
ECA236G1003 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.6e-13 77.4 95 32.6
HanXRQChr08g0234191 Helianthus annuus HOM05D000003 ORTHO05D000004 7.6e-13 77.4 90 36.7
HanXRQChr05g0162531 Helianthus annuus HOM05D000080 ORTHO05D000053 9.9e-13 77.0 87 41.4
HanXRQChr02g0036951 Helianthus annuus HOM05D000005 ORTHO05D000294 1.7e-12 76.3 91 35.2
HanXRQChr12g0376001 Helianthus annuus HOM05D000003 ORTHO05D000004 1.7e-12 76.3 96 31.2
ECA246G1543 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-12 75.1 98 31.6
HanXRQChr09g0254861 Helianthus annuus HOM05D000003 ORTHO05D000004 3.8e-12 75.1 94 29.8
ECA232G3889 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-11 73.6 94 35.1
ECA246G5162 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-11 73.6 91 36.3
ECA236G2457 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-11 72.8 99 28.3
HanXRQChr05g0151751 Helianthus annuus HOM05D000003 ORTHO05D000004 2.4e-11 72.4 99 29.3
ECA233G2306 Erigeron canadensis HOM05D000296 ORTHO05D000175 3.2e-11 72.0 95 33.7
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 5.4e-11 71.2 94 28.7
HanXRQChr14g0451141 Helianthus annuus HOM05D000003 ORTHO05D000004 7.1e-11 70.9 93 33.3
ECA246G4424 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.2e-10 70.1 91 31.9
ECA232G4463 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.0e-10 67.8 91 30.8
ECA232G4857 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.0e-10 67.8 91 35.2
HanXRQChr07g0194271 Helianthus annuus HOM05D000003 ORTHO05D000004 7.8e-10 67.4 95 34.7
HanXRQChr09g0272141 Helianthus annuus HOM05D000003 ORTHO05D000004 7.8e-10 67.4 95 34.7
HanXRQChr15g0469871 Helianthus annuus HOM05D000003 ORTHO05D000004 1.3e-09 66.6 87 35.6
ECA233G0347 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-09 66.2 91 29.7
HanXRQChr01g0000301 Helianthus annuus HOM05D036175 ORTHO05D000004 1.7e-09 66.2 71 35.2
HanXRQChr07g0188391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.7e-09 66.2 83 38.6
ECA232G3635 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.3e-09 65.9 91 33.0
HanXRQChr07g0202241 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-08 63.5 82 31.7
ECA246G3612 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-08 62.8 94 26.6
ECA238G4791 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-08 62.0 99 26.3
HanXRQChr02g0037941 Helianthus annuus HOM05D000003 ORTHO05D000004 7.3e-08 60.8 79 26.6
ECA233G3171 Erigeron canadensis HOM05D000002 ORTHO05D000004 1.3e-07 60.1 77 35.1
ECA236G2334 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.8e-07 58.2 91 27.5
HanXRQChr17g0567841 Helianthus annuus HOM05D000003 ORTHO05D002335 4.8e-07 58.2 56 39.3
Medtr1g046260 Medicago truncatula HOM05D002545 ORTHO05D002335 4.8e-07 58.2 84 27.4
ECA236G0216 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.2e-07 57.8 91 25.3
ECA238G1736 Erigeron canadensis HOM05D000043 ORTHO05D000004 6.2e-07 57.8 73 32.9
ECA246G3864 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.2e-07 57.8 94 29.8
TPR.G11793 Trifolium pratense HOM05D002545 ORTHO05D002335 8.1e-07 57.4 58 36.2
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.4e-06 56.6 79 30.4
TPR.G29823 Trifolium pratense HOM05D000003 ORTHO05D002335 1.8e-06 56.2 66 34.8
TPR.G33155 Trifolium pratense HOM05D002545 ORTHO05D002335 3.1e-06 55.5 98 28.6
Medtr8g006020 Medicago truncatula HOM05D002545 ORTHO05D002335 4.0e-06 55.1 70 30.0
Medtr8g078210 Medicago truncatula HOM05D002545 ORTHO05D002335 4.0e-06 55.1 65 30.8
Medtr2g095160 Medicago truncatula HOM05D002545 ORTHO05D002335 5.3e-06 54.7 90 25.6
Medtr5g007390 Medicago truncatula HOM05D000003 ORTHO05D002335 6.9e-06 54.3 70 37.1


User provided reference genes

Program Settings