Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0346681 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-184 649.8 329 100.0
HanXRQChr04g0123381 Helianthus annuus HOM05D001334 ORTHO05D001119 7.2e-51 205.3 110 92.7
HanXRQChr11g0340101 Helianthus annuus HOM05D001334 ORTHO05D001119 3.1e-38 163.3 85 96.5
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 1.5e-32 144.4 212 41.0
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 1.5e-32 144.4 212 41.0
HanXRQChr13g0387501 Helianthus annuus HOM05D003964 ORTHO05D000174 4.1e-30 136.3 199 39.2
HanXRQChr15g0471541 Helianthus annuus HOM05D003964 ORTHO05D000174 3.4e-24 116.7 234 34.2
HanXRQChr15g0464461 Helianthus annuus HOM05D003964 ORTHO05D000174 5.8e-24 115.9 234 34.2
HanXRQChr00c0635g0576641 Helianthus annuus HOM05D003964 ORTHO05D000174 7.0e-22 109.0 220 37.7
Lsat_1_v5_gn_7_47140 Lactuca sativa HOM05D007823 ORTHO05D000174 1.6e-21 107.8 208 36.1
Lsat_1_v5_gn_5_188581 Lactuca sativa HOM05D007823 ORTHO05D000174 4.6e-21 106.3 210 34.3
HanXRQChr12g0361281 Helianthus annuus HOM05D003964 ORTHO05D000174 1.7e-20 104.4 219 33.8
Lsat_1_v5_gn_6_67080 Lactuca sativa HOM05D007823 ORTHO05D000174 2.3e-20 104.0 220 34.5
HanXRQChr08g0227821 Helianthus annuus HOM05D007823 ORTHO05D000174 3.9e-20 103.2 92 50.0
Lsat_1_v5_gn_8_29300 Lactuca sativa HOM05D007823 ORTHO05D000174 3.9e-20 103.2 208 32.7
Lsat_1_v5_gn_6_56620 Lactuca sativa HOM05D007823 ORTHO05D000174 6.6e-20 102.4 235 33.6
HanXRQChr09g0254941 Helianthus annuus HOM05D003964 ORTHO05D000174 1.9e-19 100.9 210 31.4
HanXRQChr04g0101601 Helianthus annuus HOM05D003964 ORTHO05D000174 3.3e-19 100.1 215 33.0
HanXRQChr15g0487781 Helianthus annuus HOM05D003964 ORTHO05D000174 4.3e-19 99.8 222 31.5
HanXRQChr03g0084461 Helianthus annuus HOM05D003964 ORTHO05D000174 9.5e-19 98.6 220 32.7
HanXRQChr09g0257401 Helianthus annuus HOM05D003964 ORTHO05D000174 2.1e-18 97.4 216 31.9
HanXRQChr07g0205571 Helianthus annuus HOM05D003964 ORTHO05D000174 4.7e-18 96.3 209 31.1
Lsat_1_v5_gn_9_54340 Lactuca sativa HOM05D007823 ORTHO05D000174 1.4e-17 94.7 189 33.3
HanXRQChr14g0428201 Helianthus annuus HOM05D003964 ORTHO05D000174 1.8e-17 94.4 92 46.7
HanXRQChr05g0160951 Helianthus annuus HOM05D003964 ORTHO05D000174 2.3e-17 94.0 192 34.9
HanXRQChr13g0412841 Helianthus annuus HOM05D003964 ORTHO05D000174 2.3e-17 94.0 188 35.6
HanXRQChr17g0567981 Helianthus annuus HOM05D003964 ORTHO05D000174 2.3e-17 94.0 191 35.1
Lsat_1_v5_gn_3_80740 Lactuca sativa HOM05D007823 ORTHO05D000174 6.8e-17 92.4 137 37.2
Lsat_1_v5_gn_8_23420 Lactuca sativa HOM05D007823 ORTHO05D000174 6.8e-17 92.4 207 34.8
Lsat_1_v5_gn_9_75581 Lactuca sativa HOM05D007823 ORTHO05D000174 8.9e-17 92.0 212 34.0
HanXRQChr08g0219171 Helianthus annuus HOM05D003964 ORTHO05D000174 1.2e-16 91.7 219 32.4
Lsat_1_v5_gn_1_13461 Lactuca sativa HOM05D007823 ORTHO05D000174 1.2e-16 91.7 208 32.7
Lsat_1_v5_gn_4_105340 Lactuca sativa HOM05D007823 ORTHO05D000174 1.2e-16 91.7 210 33.3
Lsat_1_v5_gn_3_125861 Lactuca sativa HOM05D007823 ORTHO05D000174 1.5e-16 91.3 137 36.5
Lsat_1_v5_gn_4_174021 Lactuca sativa HOM05D007823 ORTHO05D000174 2.0e-16 90.9 210 34.3
HanXRQChr01g0013421 Helianthus annuus HOM05D003964 ORTHO05D000174 2.6e-16 90.5 210 29.5
HanXRQChr05g0155711 Helianthus annuus HOM05D003964 ORTHO05D000174 3.4e-16 90.1 210 29.5
Lsat_1_v5_gn_6_53701 Lactuca sativa HOM05D000071 ORTHO05D000029 3.4e-16 90.1 210 33.3
HanXRQChr05g0143541 Helianthus annuus HOM05D003964 ORTHO05D000174 4.4e-16 89.7 83 49.4
HanXRQChr06g0179651 Helianthus annuus HOM05D003964 ORTHO05D000174 5.8e-16 89.4 215 32.1
HanXRQChr08g0230241 Helianthus annuus HOM05D003964 ORTHO05D000174 7.5e-16 89.0 215 32.1
Lsat_1_v5_gn_4_63501 Lactuca sativa HOM05D007823 ORTHO05D000174 1.7e-15 87.8 214 32.7
HanXRQChr13g0404371 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-14 85.1 236 34.3
Lsat_1_v5_gn_9_50581 Lactuca sativa HOM05D007823 ORTHO05D000174 1.1e-14 85.1 215 32.1
HanXRQChr03g0063491 Helianthus annuus HOM05D003964 ORTHO05D000174 1.4e-14 84.7 189 35.4
HanXRQChr07g0201541 Helianthus annuus HOM05D003964 ORTHO05D000174 1.4e-14 84.7 190 35.3
HanXRQChr15g0463841 Helianthus annuus HOM05D000353 ORTHO05D000174 1.4e-14 84.7 184 32.6
HanXRQChr10g0302731 Helianthus annuus HOM05D003964 ORTHO05D000174 3.2e-14 83.6 220 31.4
HanXRQChr14g0452311 Helianthus annuus HOM05D003964 ORTHO05D000174 3.2e-14 83.6 99 45.5
HanXRQChr15g0490181 Helianthus annuus HOM05D003964 ORTHO05D000174 3.2e-14 83.6 188 30.3
HanXRQChr13g0392821 Helianthus annuus HOM05D003964 ORTHO05D000174 4.1e-14 83.2 99 45.5
HanXRQChr10g0290091 Helianthus annuus HOM05D003964 ORTHO05D000174 5.4e-14 82.8 194 34.0
Lsat_1_v5_gn_2_35760 Lactuca sativa HOM05D007823 ORTHO05D000174 3.5e-13 80.1 210 33.3
ECA233G1394 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.6e-13 79.7 102 41.2
HanXRQChr16g0520611 Helianthus annuus HOM05D000096 ORTHO05D000045 6.0e-13 79.3 107 34.6
Lsat_1_v5_gn_1_81940 Lactuca sativa HOM05D007823 ORTHO05D000174 6.0e-13 79.3 208 29.3
Lsat_1_v5_gn_8_54441 Lactuca sativa HOM05D007823 ORTHO05D000174 6.0e-13 79.3 208 29.3
Lsat_1_v5_gn_4_174001 Lactuca sativa HOM05D024279 ORTHO05D000174 1.3e-12 78.2 220 30.9
HanXRQChr13g0398071 Helianthus annuus HOM05D003964 ORTHO05D000174 2.3e-12 77.4 194 28.9
Lsat_1_v5_gn_0_24061 Lactuca sativa HOM05D007823 ORTHO05D000174 2.3e-12 77.4 94 41.5
Lsat_1_v5_gn_1_29140 Lactuca sativa HOM05D007823 ORTHO05D000174 3.0e-12 77.0 213 30.0
ECA234G0608 Erigeron canadensis HOM05D000615 ORTHO05D000447 3.9e-12 76.6 100 39.0
HanXRQChr17g0554621 Helianthus annuus HOM05D003964 ORTHO05D000174 3.9e-12 76.6 159 28.3
Lsat_1_v5_gn_1_124241 Lactuca sativa HOM05D007823 ORTHO05D000174 5.1e-12 76.3 137 35.0
HanXRQChr05g0145471 Helianthus annuus HOM05D003964 ORTHO05D000174 6.6e-12 75.9 184 29.3
HanXRQChr01g0015091 Helianthus annuus HOM05D003964 ORTHO05D000174 8.6e-12 75.5 194 28.4
HanXRQChr09g0260311 Helianthus annuus HOM05D000353 ORTHO05D000174 8.6e-12 75.5 92 42.4
Lsat_1_v5_gn_4_132180 Lactuca sativa HOM05D007823 ORTHO05D000174 1.9e-11 74.3 210 31.4
Lsat_1_v5_gn_7_86861 Lactuca sativa HOM05D007823 ORTHO05D000174 2.5e-11 73.9 170 31.2
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.3e-11 73.2 111 36.0
ECA238G3619 Erigeron canadensis HOM05D000353 ORTHO05D000174 9.5e-11 72.0 217 30.0
ECA248G0780 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.2e-10 71.6 100 36.0
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.6e-10 71.2 110 36.4
HanXRQChr02g0039491 Helianthus annuus HOM05D003964 ORTHO05D002376 1.6e-10 71.2 126 34.1
Lsat_1_v5_gn_5_68480 Lactuca sativa HOM05D007823 ORTHO05D000174 1.6e-10 71.2 188 29.8
HanXRQChr01g0021371 Helianthus annuus HOM05D003964 ORTHO05D000174 2.1e-10 70.9 121 34.7
ECA238G1832 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-10 70.1 200 30.0
ECA247G4094 Erigeron canadensis HOM05D000353 ORTHO05D000174 4.7e-10 69.7 222 30.2
ECA240G1473 Erigeron canadensis HOM05D000353 ORTHO05D000174 6.2e-10 69.3 172 27.9
ECA246G4325 Erigeron canadensis HOM05D000353 ORTHO05D000174 6.2e-10 69.3 217 30.0
HanXRQChr11g0325941 Helianthus annuus HOM05D003964 ORTHO05D000174 6.2e-10 69.3 98 37.8
ECA238G2764 Erigeron canadensis HOM05D003964 ORTHO05D002376 8.1e-10 68.9 154 29.9
ECA246G2956 Erigeron canadensis HOM05D000353 ORTHO05D000174 8.1e-10 68.9 154 29.9
Lsat_1_v5_gn_4_64681 Lactuca sativa HOM05D007823 ORTHO05D000174 1.1e-09 68.6 162 32.7
ECA236G2182 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.3e-09 67.4 154 29.9
HanXRQChr01g0013951 Helianthus annuus HOM05D003964 ORTHO05D000174 2.3e-09 67.4 169 34.3
ECA246G4199 Erigeron canadensis HOM05D003964 ORTHO05D011082 4.0e-09 66.6 155 31.0
HanXRQChr09g0240161 Helianthus annuus HOM05D003964 ORTHO05D000174 4.0e-09 66.6 104 28.8
HanXRQChr09g0260381 Helianthus annuus HOM05D003964 ORTHO05D000174 5.2e-09 66.2 168 31.0
ECA233G5850 Erigeron canadensis HOM05D003964 ORTHO05D002376 8.9e-09 65.5 159 28.9
HanXRQChr13g0400781 Helianthus annuus HOM05D003964 ORTHO05D000174 8.9e-09 65.5 175 30.3
ECA234G0749 Erigeron canadensis HOM05D003964 ORTHO05D002376 2.0e-08 64.3 161 29.2
ECA234G2462 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-08 64.3 161 28.0
Lsat_1_v5_gn_2_57200 Lactuca sativa HOM05D007823 ORTHO05D000174 3.4e-08 63.5 165 32.1
ECA233G3201 Erigeron canadensis HOM05D000353 ORTHO05D000174 4.4e-08 63.2 142 30.3
ECA248G2532 Erigeron canadensis HOM05D003964 ORTHO05D000174 9.9e-08 62.0 158 29.1
ECA233G1400 Erigeron canadensis HOM05D003964 ORTHO05D000174 1.3e-07 61.6 161 27.3
HanXRQChr03g0062081 Helianthus annuus HOM05D003964 ORTHO05D000174 1.3e-07 61.6 106 29.2
ECA240G2532 Erigeron canadensis HOM05D003964 ORTHO05D000174 1.7e-07 61.2 137 29.9
ECA232G3959 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-07 60.8 161 27.3
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 3.7e-07 60.1 145 29.7
Ah.05g169550 Amaranthus hybridus HOM05D002441 ORTHO05D002376 4.9e-07 59.7 109 28.4
Ah.08g210030 Amaranthus hybridus HOM05D002441 ORTHO05D002376 4.9e-07 59.7 176 23.3
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.9e-07 59.7 164 28.0
ECA238G1979 Erigeron canadensis HOM05D003964 ORTHO05D000174 4.9e-07 59.7 191 26.7
ECA248G0798 Erigeron canadensis HOM05D003964 ORTHO05D000174 6.4e-07 59.3 191 26.7
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-07 58.9 143 28.7
ECA240G4108 Erigeron canadensis HOM05D003964 ORTHO05D002376 8.3e-07 58.9 146 28.1
ECA238G0067 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.1e-06 58.5 184 26.6
ECA238G3910 Erigeron canadensis HOM05D009063 ORTHO05D011082 4.1e-06 56.6 88 28.4
ECA246G3753 Erigeron canadensis HOM05D003964 ORTHO05D000174 4.1e-06 56.6 87 32.2
Lsat_1_v5_gn_2_46441 Lactuca sativa HOM05D002730 ORTHO05D011082 7.1e-06 55.8 111 27.9
Lsat_1_v5_gn_2_121501 Lactuca sativa HOM05D007823 ORTHO05D000174 9.2e-06 55.5 209 27.8
Nitab4.5_0007294g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.2e-06 55.5 88 30.7


User provided reference genes

Program Settings