Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 6.8e-142 507.3 253 100.0
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.1e-114 416.0 241 83.4
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.8e-94 349.7 248 69.0
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 2.4e-94 349.4 253 67.6
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 4.1e-94 348.6 252 67.5
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 5.3e-94 348.2 247 70.0
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 1.7e-92 343.2 247 70.0
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 2.9e-92 342.4 246 67.1
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 5.0e-92 341.7 243 68.7
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 6.5e-92 341.3 247 67.6
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 1.1e-91 340.5 247 66.4
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 1.1e-91 340.5 247 66.8
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.4e-91 340.1 246 67.5
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.5e-91 339.3 247 67.2
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 4.2e-91 338.6 246 66.7
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 7.2e-91 337.8 247 67.6
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 1.2e-90 337.0 247 67.6
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 2.1e-90 336.3 249 65.5
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 2.1e-90 336.3 252 65.9
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 2.7e-90 335.9 260 65.4
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.6e-90 335.5 247 66.0
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 4.6e-90 335.1 247 65.6
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 4.6e-90 335.1 245 66.5
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 6.1e-90 334.7 247 66.4
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 6.1e-90 334.7 249 65.1
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 7.9e-90 334.3 246 65.9
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 1.8e-89 333.2 247 66.8
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 1.8e-89 333.2 248 65.3
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.8e-89 333.2 249 65.1
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 2.3e-89 332.8 247 65.6
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 3.9e-89 332.0 247 65.6
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.9e-89 332.0 249 65.1
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 6.7e-89 331.3 252 65.1
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 6.7e-89 331.3 252 65.1
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 6.7e-89 331.3 248 62.9
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 8.7e-89 330.9 247 65.6
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 8.7e-89 330.9 247 66.0
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 8.7e-89 330.9 252 65.5
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 1.1e-88 330.5 248 66.1
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 1.1e-88 330.5 252 63.1
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.1e-88 330.5 247 65.6
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 1.5e-88 330.1 247 66.0
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.5e-88 329.3 247 65.6
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 3.3e-88 328.9 245 67.8
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 4.3e-88 328.6 245 66.1
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 5.7e-88 328.2 245 66.1
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 7.4e-88 327.8 245 65.7
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 7.4e-88 327.8 246 64.6
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 1.6e-87 326.6 247 63.2
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 2.8e-87 325.9 265 62.3
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 4.8e-87 325.1 254 65.4
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 4.8e-87 325.1 253 63.6
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 8.2e-87 324.3 248 64.5
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 8.2e-87 324.3 254 63.4
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 8.2e-87 324.3 245 65.3
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 2.4e-86 322.8 244 65.6
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 3.1e-86 322.4 245 64.1
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 3.1e-86 322.4 244 63.9
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 4.1e-86 322.0 247 63.2
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 1.2e-85 320.5 250 62.4
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 3.4e-85 318.9 247 63.6
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 3.4e-85 318.9 262 61.5
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 3.4e-85 318.9 244 64.8
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 3.4e-85 318.9 245 62.9
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 4.5e-85 318.5 246 63.4
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 4.5e-85 318.5 247 62.3
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 5.9e-85 318.2 248 63.3
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 5.9e-85 318.2 244 64.3
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 5.9e-85 318.2 243 65.4
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 7.7e-85 317.8 229 67.2
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 1.0e-84 317.4 246 61.8
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 1.0e-84 317.4 244 64.3
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 1.7e-84 316.6 245 64.9
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.9e-84 315.8 248 63.3
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 2.9e-84 315.8 245 62.9
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 5.0e-84 315.1 231 67.1
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 6.5e-84 314.7 235 64.7
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 8.5e-84 314.3 235 66.4
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 8.5e-84 314.3 263 60.8
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.5e-83 312.8 247 62.3
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 2.5e-83 312.8 248 61.7
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 5.5e-83 311.6 245 62.0
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 2.1e-82 309.7 248 60.9
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 2.7e-82 309.3 263 60.1
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 4.6e-82 308.5 284 55.3
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 4.6e-82 308.5 231 66.2
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 6.1e-82 308.1 247 60.3
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 6.1e-82 308.1 250 59.2
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 7.9e-82 307.8 248 60.5
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 7.9e-82 307.8 222 67.1
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.4e-81 307.0 254 60.2
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 2.3e-81 306.2 248 60.9
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 2.3e-81 306.2 234 64.5
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 3.0e-81 305.8 246 62.2
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 3.9e-81 305.4 247 60.3
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 1.1e-80 303.9 213 69.5
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 1.5e-80 303.5 234 63.2
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 2.6e-80 302.8 316 52.2
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 2.6e-80 302.8 247 62.3
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 3.3e-80 302.4 250 59.2
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 4.4e-80 302.0 213 67.6
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 5.7e-80 301.6 213 69.0
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 5.7e-80 301.6 230 65.2
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 7.4e-80 301.2 282 54.6
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 7.4e-80 301.2 228 65.8
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 7.4e-80 301.2 246 62.2
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 2.2e-79 299.7 250 58.0
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 2.2e-79 299.7 250 58.0
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 2.2e-79 299.7 250 58.8
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 2.8e-79 299.3 213 68.5
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 3.7e-79 298.9 250 58.8
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 3.7e-79 298.9 250 59.2
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 4.8e-79 298.5 248 58.9
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 4.8e-79 298.5 250 56.8
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 4.8e-79 298.5 245 60.8
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 6.3e-79 298.1 246 61.0
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 6.3e-79 298.1 246 61.0
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 8.2e-79 297.7 262 57.6
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 1.1e-78 297.4 259 58.3
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 1.4e-78 297.0 250 58.4
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 8.5e-76 287.7 247 59.5
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 1.4e-75 287.0 250 59.6
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.9e-75 286.6 217 65.0
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 2.1e-74 283.1 247 58.7
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 2.3e-73 279.6 256 57.0
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 2.0e-72 276.6 212 65.6
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 3.3e-72 275.8 248 55.2
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 1.6e-69 266.9 187 67.9
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 2.0e-69 266.5 204 63.2
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 3.5e-69 265.8 248 56.9
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 3.5e-69 265.8 249 55.0
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.0e-68 261.9 206 63.6
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.2e-66 257.3 304 47.4
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.8e-65 253.4 250 50.0
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 3.0e-65 252.7 248 54.4
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.0e-64 250.0 234 53.8
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 2.6e-64 249.6 243 49.4
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 2.6e-64 249.6 181 66.3
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 4.4e-64 248.8 250 49.2
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 2.8e-63 246.1 184 67.4
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.1e-62 242.3 196 64.8
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 2.0e-61 240.0 181 64.1
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.0e-60 237.7 234 49.6
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 5.0e-60 235.3 249 51.8
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 8.5e-60 234.6 252 48.8
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 1.8e-57 226.9 249 47.4
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 4.2e-51 205.7 142 69.0
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.2e-51 204.9 207 55.6
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 5.7e-48 195.3 244 41.8
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 3.7e-47 192.6 146 67.1
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 2.4e-46 189.9 234 41.9
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.3e-44 183.3 194 51.0
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.4e-38 162.2 166 53.6
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.0e-37 160.2 104 70.2
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 2.3e-36 156.8 120 66.7
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 1.1e-30 137.9 105 68.6
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 4.1e-30 136.0 148 54.1
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.9e-28 129.4 95 70.5
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 7.5e-24 115.2 243 32.5
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 2.1e-21 107.1 69 68.1
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 3.0e-20 103.2 99 57.6
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 2.5e-19 100.1 166 38.6
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 5.6e-19 99.0 82 57.3
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 2.4e-17 93.6 67 59.7
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 4.0e-17 92.8 83 53.0
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 4.0e-17 92.8 83 53.0
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 2.9e-15 86.7 142 38.7
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.1e-14 84.7 68 61.8
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.5e-11 74.3 68 54.4
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 5.6e-11 72.4 123 41.5
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 2.1e-10 70.5 287 24.7
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 8.1e-10 68.6 84 46.4
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 5.8e-08 62.4 167 26.9
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 3.2e-06 56.6 51 52.9


User provided reference genes

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