Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 0.0e+00 2147.5 1130 100.0
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 0.0e+00 1506.9 1119 73.5
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 0.0e+00 1367.8 1195 66.7
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1090.5 1235 51.8
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 0.0e+00 1088.2 1246 52.6
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1075.1 1189 52.7
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 1.5e-311 1072.8 1226 53.1
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 5.4e-311 1071.2 1174 52.8
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 7.7e-310 1067.4 1222 52.5
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 4.9e-309 1064.7 1215 53.2
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 1.9e-308 1062.8 1179 52.0
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 1.2e-307 1060.1 1227 52.4
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 1.6e-307 1059.7 1162 52.9
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 6.1e-307 1057.7 1242 52.3
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.0e-306 1057.0 1284 50.7
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 2.3e-306 1055.8 1223 53.7
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 6.7e-306 1054.3 1240 51.6
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 1.5e-305 1053.1 1230 53.0
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 4.3e-305 1051.6 1243 51.5
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 5.7e-305 1051.2 1232 51.1
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 2.8e-304 1048.9 1225 50.9
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 3.7e-304 1048.5 1168 52.3
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 8.2e-304 1047.3 1229 50.4
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 6.9e-303 1044.3 1220 52.0
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 1.2e-302 1043.5 1232 50.9
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 5.9e-302 1041.2 1222 53.3
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 7.7e-302 1040.8 1273 50.5
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 1.9e-300 1036.2 1223 50.9
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 9.4e-300 1033.9 1240 51.3
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.8e-298 1029.6 1276 50.6
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 8.8e-298 1027.3 1223 52.2
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 1.7e-296 1023.1 1246 50.7
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 2.8e-296 1022.3 1223 52.0
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 4.8e-296 1021.5 1239 49.7
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 1.1e-295 1020.4 1185 50.8
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 3.1e-295 1018.8 1238 49.8
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 6.9e-295 1017.7 1082 56.0
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 2.6e-294 1015.8 1190 50.6
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 4.5e-294 1015.0 1233 51.3
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 5.0e-293 1011.5 1242 49.6
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 6.5e-293 1011.1 1236 50.5
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 8.5e-293 1010.7 1228 50.7
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 1.9e-292 1009.6 1225 50.9
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 1.8e-290 1003.0 1187 50.1
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 3.9e-290 1001.9 1188 49.9
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 6.5e-285 984.6 1188 49.7
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 1.1e-284 983.8 1107 50.7
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 7.2e-284 981.1 1221 51.5
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 1.6e-283 979.9 1179 50.1
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 4.7e-283 978.4 1184 50.2
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 2.3e-282 976.1 1222 50.7
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 3.7e-280 968.8 1006 56.9
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 1.8e-279 966.5 1179 49.7
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 3.5e-278 962.2 1216 48.9
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 5.0e-277 958.4 1206 49.3
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 8.5e-277 957.6 1172 49.9
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 1.2e-275 953.7 1159 49.7
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 4.7e-275 951.8 1303 47.1
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 3.7e-272 942.2 1220 48.2
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 1.4e-271 940.3 1201 48.3
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 4.5e-270 935.3 1207 48.1
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 2.2e-269 932.9 1181 48.4
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 2.9e-269 932.6 1167 49.4
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 3.6e-267 925.6 1165 47.6
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 8.0e-267 924.5 1277 46.1
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 2.6e-265 919.5 1232 48.9
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 1.7e-264 916.8 1177 47.2
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.6e-262 910.2 1186 48.8
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 2.3e-261 906.4 1242 47.3
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 2.8e-259 899.4 1163 46.5
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 1.4e-255 887.1 1159 47.7
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 8.0e-251 871.3 1158 46.8
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 2.3e-250 869.8 1150 44.7
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 4.9e-248 862.1 1221 46.3
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 3.9e-245 852.4 1187 45.2
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 7.3e-236 821.6 1044 48.6
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 7.8e-230 801.6 776 58.9
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 3.6e-227 792.7 1260 42.6
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 4.6e-222 775.8 1117 45.5
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 2.6e-217 760.0 1216 43.1
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 9.3e-215 751.5 1027 47.2
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 1.2e-214 751.1 1156 42.0
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 1.5e-209 734.2 1163 41.2
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 1.9e-204 717.2 750 55.1
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 7.1e-199 698.7 986 44.5
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 7.4e-188 662.1 954 44.4
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 1.8e-181 641.0 748 51.3
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.4e-178 631.3 1151 39.6
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 1.3e-168 598.2 1113 38.8
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 9.4e-159 565.5 1187 35.7
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 4.5e-145 520.0 618 48.4
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 1.7e-139 501.5 1263 33.3
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 6.4e-131 473.0 1135 33.7
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 3.4e-124 450.7 619 46.5
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 2.4e-90 338.2 366 53.0
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 2.9e-83 314.7 398 46.5
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 1.0e-67 263.1 438 43.6
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.8e-67 261.2 504 37.5
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 5.7e-63 247.3 376 40.4
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 4.7e-57 227.6 1284 25.4
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 6.1e-33 147.5 182 59.3
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 2.3e-32 145.6 240 38.3
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 3.0e-32 145.2 185 49.7
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 5.4e-29 134.4 122 56.6
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.9e-27 128.6 86 66.3
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 2.5e-26 125.6 101 60.4
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 1.5e-23 116.3 78 66.7
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 2.0e-23 115.9 108 53.7
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 7.8e-20 104.0 92 55.4
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.7e-17 94.7 184 39.7
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 5.8e-15 87.8 115 49.6
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 7.0e-13 80.9 73 53.4
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 1.2e-12 80.1 269 29.0
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 3.4e-07 62.0 74 40.5


User provided reference genes

Program Settings