Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 1.1e-84 316.6 164 100.0
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 1.7e-64 249.6 162 80.2
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.1e-60 236.9 161 78.9
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.3e-45 186.8 167 61.1
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 2.5e-44 182.6 164 65.2
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 4.0e-42 175.3 148 65.5
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 6.8e-42 174.5 146 64.4
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 6.8e-42 174.5 118 74.6
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 6.8e-42 174.5 127 71.7
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.5e-41 173.3 166 60.8
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 1.5e-41 173.3 162 58.6
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 2.6e-41 172.6 166 58.4
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.6e-41 172.6 166 60.2
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 3.4e-41 172.2 167 58.7
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 4.4e-41 171.8 111 81.1
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 5.8e-41 171.4 121 73.6
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 5.8e-41 171.4 157 63.1
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 7.5e-41 171.0 112 76.8
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 9.8e-41 170.6 130 68.5
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.3e-40 170.2 167 60.5
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.3e-40 170.2 167 60.5
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.3e-40 170.2 161 60.9
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.7e-40 169.9 110 78.2
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 2.2e-40 169.5 115 73.9
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 2.9e-40 169.1 165 59.4
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 3.7e-40 168.7 111 77.5
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.9e-40 168.3 112 75.0
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.4e-40 167.9 112 75.9
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 8.3e-40 167.5 162 58.0
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 8.3e-40 167.5 144 63.9
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.4e-39 166.8 123 69.9
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.8e-39 166.4 164 57.9
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 2.4e-39 166.0 112 75.9
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 5.4e-39 164.9 114 73.7
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 9.2e-39 164.1 122 68.0
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 1.2e-38 163.7 165 57.6
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.0e-38 162.9 162 58.6
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 4.6e-38 161.8 165 58.8
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 7.8e-38 161.0 119 70.6
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 1.0e-37 160.6 166 57.2
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.0e-37 160.6 115 70.4
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.0e-37 160.6 166 55.4
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 1.3e-37 160.2 160 60.0
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.3e-37 160.2 165 57.6
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.3e-37 160.2 160 56.2
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 2.3e-37 159.5 163 56.4
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 3.0e-37 159.1 143 62.2
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 3.0e-37 159.1 115 68.7
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 3.9e-37 158.7 111 72.1
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 5.0e-37 158.3 133 63.2
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 8.6e-37 157.5 160 55.6
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 1.1e-36 157.1 166 57.8
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 2.5e-36 156.0 166 56.6
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 2.5e-36 156.0 101 76.2
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 5.6e-36 154.8 165 57.6
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 9.5e-36 154.1 166 56.6
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 1.2e-35 153.7 166 55.4
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 1.2e-35 153.7 166 55.4
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 1.2e-35 153.7 166 55.4
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.1e-35 152.9 166 55.4
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.1e-35 152.9 166 55.4
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 8.0e-35 151.0 110 70.0
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.8e-34 149.8 112 64.3
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.8e-34 149.8 119 64.7
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 3.1e-34 149.1 117 65.8
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 3.1e-34 149.1 117 65.8
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 3.1e-34 149.1 172 51.7
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 6.8e-34 147.9 127 63.0
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 8.9e-34 147.5 117 70.1
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 2.0e-33 146.4 167 54.5
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.6e-33 146.0 162 51.9
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 4.4e-33 145.2 167 52.1
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 5.8e-33 144.8 116 64.7
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 7.5e-33 144.4 111 64.9
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 2.2e-32 142.9 195 48.2
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 4.9e-32 141.7 125 57.6
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 8.3e-32 141.0 112 64.3
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 3.9e-29 132.1 97 64.9
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 8.6e-29 131.0 157 51.0
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.5e-28 130.2 147 46.9
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.5e-28 130.2 117 61.5
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 3.3e-28 129.0 115 60.9
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 2.1e-27 126.3 140 56.4
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.8e-26 123.2 140 55.0
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.1e-26 122.5 148 54.1
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 6.8e-26 121.3 93 67.7
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.2e-25 120.6 117 57.3
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.5e-25 120.2 135 54.8
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 4.4e-25 118.6 109 55.0
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.9e-23 113.2 112 58.9
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.3e-21 107.1 107 51.4
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 1.3e-21 107.1 71 62.0
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 1.3e-21 107.1 110 48.2
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 5.1e-21 105.1 119 46.2
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 5.6e-20 101.7 81 63.0
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 1.1e-18 97.4 57 77.2
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 4.4e-17 92.0 110 45.5
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 7.6e-17 91.3 175 38.3
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 7.1e-15 84.7 115 44.3
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 9.2e-15 84.3 112 42.9
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.2e-14 84.0 108 44.4
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.2e-11 71.6 135 36.3
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.4e-10 69.7 48 64.6
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 2.4e-07 59.7 115 40.0
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 9.3e-07 57.8 112 36.6


User provided reference genes

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